Definition | Burkholderia phymatum STM815 chromosome chromosome 1, complete sequence. |
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Accession | NC_010622 |
Length | 3,479,187 |
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The map label for this gene is 186475982
Identifier: 186475982
GI number: 186475982
Start: 1371919
End: 1372149
Strand: Reverse
Name: 186475982
Synonym: Bphy_1223
Alternate gene names: NA
Gene position: 1372149-1371919 (Counterclockwise)
Preceding gene: 186475985
Following gene: 186475979
Centisome position: 39.44
GC content: 56.28
Gene sequence:
>231_bases ATGAGCAAAATTGCCTTCCAGGATTTCGAACGCCAGGTGTTGCAGCGTCACATGATCCGGGGACATGTGTACGAGAATGC CGCTGCCCTCGTTGATCGCGCGAACGCGTGGATCGCCGAGCATCAAGTCGATGTGATCAACGTGGAAAGCCTGTCGACTT TCGGCTCTGGCGACGACACGAGCGTGAGTCACTGGTATTCGGGTATCCGCGTGTGGTATCGCACCGAATAG
Upstream 100 bases:
>100_bases CAATGTCTGCCCTTATGCAGCAATTGCCGGTCCCGTGCCGCCGTTGATAGACTCATCGCCGGGGCGCCGATGTAAAAAAC AGCCCGACGGAGACAAGACC
Downstream 100 bases:
>100_bases CGCATGGCGCGGGCAAGGCTATTTGCCCGATACAACCAGTTTTAGCTTGTTTGCACCAGCGGGCATCGCGGTGATCTGTG TGCGCGCTTCGCGTGGCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 76; Mature: 75
Protein sequence:
>76_residues MSKIAFQDFERQVLQRHMIRGHVYENAAALVDRANAWIAEHQVDVINVESLSTFGSGDDTSVSHWYSGIRVWYRTE
Sequences:
>Translated_76_residues MSKIAFQDFERQVLQRHMIRGHVYENAAALVDRANAWIAEHQVDVINVESLSTFGSGDDTSVSHWYSGIRVWYRTE >Mature_75_residues SKIAFQDFERQVLQRHMIRGHVYENAAALVDRANAWIAEHQVDVINVESLSTFGSGDDTSVSHWYSGIRVWYRTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8797; Mature: 8666
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIAFQDFERQVLQRHMIRGHVYENAAALVDRANAWIAEHQVDVINVESLSTFGSGDDT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCEEEECCCCCCCCCCCCC SVSHWYSGIRVWYRTE CHHHHHCCEEEEEECC >Mature Secondary Structure SKIAFQDFERQVLQRHMIRGHVYENAAALVDRANAWIAEHQVDVINVESLSTFGSGDDT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCEEEECCCCCCCCCCCCC SVSHWYSGIRVWYRTE CHHHHHCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA