Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183222772
Identifier: 183222772
GI number: 183222772
Start: 3551406
End: 3552062
Strand: Direct
Name: 183222772
Synonym: LEPBI_I3431
Alternate gene names: NA
Gene position: 3551406-3552062 (Clockwise)
Preceding gene: 183222771
Following gene: 183222773
Centisome position: 98.66
GC content: 40.49
Gene sequence:
>657_bases TTGAAGTACGTAATCGTTGGGATTCTAATTCTATTCAGTGCATGTGCAAGGCAGAAATCTGCCTTGACCGACCAAGAATT ATTTGTGAACAATCTGATCACAAGTATAGTGAATGCTGGCAATCCCAATGCTTTGGATAAAATTGTATTCTCCCGTGCCA TTGGTGACGGGAGTTATTCAACAAGATTCAATGCCACTAATTTAGACTTTTTTATCTACTTTCAATTCGAAGGGAATAAA CAAATCCCATTTTCCGAAAAAGATTCCCTCACCTGGGACATCGCATTTAACCGGTATAAGGTGGCTACAAATTCAGGAGA AACCAATCGATTTGGACTCGGTGGAGCTTGCAAAAGTAACACAACTGATTTTGGTGTGGCTAGTTCCACTTCTGCGGCCT CTCAAGGTTGTACCAATTTTTCCATTGATGTGGCTTCCACCACACAAGGGATAGGTGGAGCAGGAGCAGTATATATAGGC AATCCTCTCGCTACAGAATGGTATTTTTATACAATTGGTTTTTTAACTCCAAAACCCGATATCTTCTTAATCCGTTCTGG TACAGGAACTTCGGTATACGCCGTACATATTGAAAATTATTATAGTGATGCAGGTACCTCTGGTTACCCAACCATCCGAT GGAAAAAACTTCCATAA
Upstream 100 bases:
>100_bases GTTTAACGGAGCAGGAGACTATTACATCTTCTTTTATGCAATCCCTTCGCGTGGACAAGCGGCGAATATTACTTATACTG TTACCAACTTATAGATTCAG
Downstream 100 bases:
>100_bases TGACACTGAATCTACAATTTTGTATTCCAATCCTTTGTTTGTTTCTTTTATTTTTTGGAGAACTCCATGCACAAACACGT ACAAATGGAAAAATAACAAA
Product: putative signal peptide
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MKYVIVGILILFSACARQKSALTDQELFVNNLITSIVNAGNPNALDKIVFSRAIGDGSYSTRFNATNLDFFIYFQFEGNK QIPFSEKDSLTWDIAFNRYKVATNSGETNRFGLGGACKSNTTDFGVASSTSAASQGCTNFSIDVASTTQGIGGAGAVYIG NPLATEWYFYTIGFLTPKPDIFLIRSGTGTSVYAVHIENYYSDAGTSGYPTIRWKKLP
Sequences:
>Translated_218_residues MKYVIVGILILFSACARQKSALTDQELFVNNLITSIVNAGNPNALDKIVFSRAIGDGSYSTRFNATNLDFFIYFQFEGNK QIPFSEKDSLTWDIAFNRYKVATNSGETNRFGLGGACKSNTTDFGVASSTSAASQGCTNFSIDVASTTQGIGGAGAVYIG NPLATEWYFYTIGFLTPKPDIFLIRSGTGTSVYAVHIENYYSDAGTSGYPTIRWKKLP >Mature_218_residues MKYVIVGILILFSACARQKSALTDQELFVNNLITSIVNAGNPNALDKIVFSRAIGDGSYSTRFNATNLDFFIYFQFEGNK QIPFSEKDSLTWDIAFNRYKVATNSGETNRFGLGGACKSNTTDFGVASSTSAASQGCTNFSIDVASTTQGIGGAGAVYIG NPLATEWYFYTIGFLTPKPDIFLIRSGTGTSVYAVHIENYYSDAGTSGYPTIRWKKLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23676; Mature: 23676
Theoretical pI: Translated: 8.00; Mature: 8.00
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYVIVGILILFSACARQKSALTDQELFVNNLITSIVNAGNPNALDKIVFSRAIGDGSYS CCEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCC TRFNATNLDFFIYFQFEGNKQIPFSEKDSLTWDIAFNRYKVATNSGETNRFGLGGACKSN EEECCCCEEEEEEEEECCCEECCCCCCCCEEEEEEEEEEEEEECCCCCCEECCCCCCCCC TTDFGVASSTSAASQGCTNFSIDVASTTQGIGGAGAVYIGNPLATEWYFYTIGFLTPKPD CCCCCCCCCCCHHHCCCCEEEEEECCCCCCCCCCCEEEECCCCCCEEEEEEEEEECCCCC IFLIRSGTGTSVYAVHIENYYSDAGTSGYPTIRWKKLP EEEEECCCCCEEEEEEEEEEECCCCCCCCCEEEEEECC >Mature Secondary Structure MKYVIVGILILFSACARQKSALTDQELFVNNLITSIVNAGNPNALDKIVFSRAIGDGSYS CCEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCC TRFNATNLDFFIYFQFEGNKQIPFSEKDSLTWDIAFNRYKVATNSGETNRFGLGGACKSN EEECCCCEEEEEEEEECCCEECCCCCCCCEEEEEEEEEEEEEECCCCCCEECCCCCCCCC TTDFGVASSTSAASQGCTNFSIDVASTTQGIGGAGAVYIGNPLATEWYFYTIGFLTPKPD CCCCCCCCCCCHHHCCCCEEEEEECCCCCCCCCCCEEEECCCCCCEEEEEEEEEECCCCC IFLIRSGTGTSVYAVHIENYYSDAGTSGYPTIRWKKLP EEEEECCCCCEEEEEEEEEEECCCCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA