Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183222758
Identifier: 183222758
GI number: 183222758
Start: 3536040
End: 3537383
Strand: Direct
Name: 183222758
Synonym: LEPBI_I3416
Alternate gene names: NA
Gene position: 3536040-3537383 (Clockwise)
Preceding gene: 183222754
Following gene: 183222759
Centisome position: 98.23
GC content: 38.17
Gene sequence:
>1344_bases TTGAGCCCATTGTGTCAGAATCTTGTAATAATATCACTCATTTTCCTTATTTTCACAGGATGTAGTAGTTTTTTTCGAAG AACACCAAACTTCACAACCATCCAAATTCCCAATTTGATACCATTTTCCCAAGTGGAAGGGTTAAAAGGGGACCAGTGGC AAAAACTATCGAAACAAAGAGACCAAAAGTTGGTCACTGCCATCATCCTTCACAATGCAGGCAAACGTAAGTTTACTGAT TTCCTTCGACTCTCCATACAAAACCAATTTCTCTTCCATCTCTATGTGGATGCAAATGGAACGATCTTCGGTGATCCCAA GTTTTTAACACAGGAATGGACGGCGGCCCCAGGGATTGATACCGAAGCGATTCATATAGTGTATGAAGGAACCCAAGAAA CTCTCTACAACAACTACAAACAAAAAGAAGTTTTAGAAAAAACCATTTTATACTTGGCTGAGGAATTGTACATTCCCAAA ACCAATTATGACATCATCTCTAAAAAAGGAATTTTCACACATAACCAAGCAAAACGAAGGTTTGGTGGTTTTGTAGATTT TTCGCCTTGTGGCAGTGAGCTTGCACTCAATCAAATTCTAACTAACATTGGTGGAAAATTTTATGAAGAAGACGATTGGA AAGATCGTTTTGTCACAGGTTGGGTCTTAAAGAAAGAAAACAAAGATTTATTAAAAGATTCATTTCATCCCACAAATGGT CGTGGCATCACGAAAGCAGAAAAAGTGATCTTTCAACATTTAGAAAAAACAGAAAAAGGATTCACACCGGAAGAGTATCG AGTGAAGTACACCTTCCGAGGAAAAATCAAACCAAGTTGTGTGGTCCTCCATTATACAGCGATTCCTGATTACTTTCGAT CCCTTCGTACATTAGAAGCAAGAAACCTCACAGCTTCAATCATGATTGATACCAATGGTAAGGCTTACCAACTCGTAGAT GTGATCGAAGACAGAGCCGCCGCCGCAACTGGAACCAATGACAATTGTATTCAAATCGAAATTGTTGCCAAAGACACTGA AGAATTGTTGAAACAACCAGAACAAATCCAAAAGGTAAAAGACCTTGTGATTGAACTCACAACCAAATACAAAATCCCTT TGTCCAATGAAAAGTTGGAAGATTTAAATGGAGTCTTTAGCCATACCCAAGCCAAAAAAAAATGGGGTGGTTCCATCTTT CTCAATGCAAAAGATTTTGATCCAGGGGAAGAATATATGGAACTCATTTTAAATTCGATTGGTGGAAAATACTTTCCAGA ACCAGAATGGAAAAATCGAAGTTCTATGGACTGGGCCATTTTATACCGCAATTTTCAACCGTAA
Upstream 100 bases:
>100_bases TGCAGTTAAGGCAAAACATTTGAGAGAAAATTTTAAGAAACGATTTCGTGAAAGTAGGAATGGTGTATACGGCTCCAAGT CTCATTTCCTTCGATTAGAT
Downstream 100 bases:
>100_bases TTAGGGAGATACTATGAAACAAACACTTGCCATTCTCATCATTGGATTTTTATTAATTTTCCAACACTGTCGTTTGACAA AACCCAATTATCACCTAACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 447; Mature: 446
Protein sequence:
>447_residues MSPLCQNLVIISLIFLIFTGCSSFFRRTPNFTTIQIPNLIPFSQVEGLKGDQWQKLSKQRDQKLVTAIILHNAGKRKFTD FLRLSIQNQFLFHLYVDANGTIFGDPKFLTQEWTAAPGIDTEAIHIVYEGTQETLYNNYKQKEVLEKTILYLAEELYIPK TNYDIISKKGIFTHNQAKRRFGGFVDFSPCGSELALNQILTNIGGKFYEEDDWKDRFVTGWVLKKENKDLLKDSFHPTNG RGITKAEKVIFQHLEKTEKGFTPEEYRVKYTFRGKIKPSCVVLHYTAIPDYFRSLRTLEARNLTASIMIDTNGKAYQLVD VIEDRAAAATGTNDNCIQIEIVAKDTEELLKQPEQIQKVKDLVIELTTKYKIPLSNEKLEDLNGVFSHTQAKKKWGGSIF LNAKDFDPGEEYMELILNSIGGKYFPEPEWKNRSSMDWAILYRNFQP
Sequences:
>Translated_447_residues MSPLCQNLVIISLIFLIFTGCSSFFRRTPNFTTIQIPNLIPFSQVEGLKGDQWQKLSKQRDQKLVTAIILHNAGKRKFTD FLRLSIQNQFLFHLYVDANGTIFGDPKFLTQEWTAAPGIDTEAIHIVYEGTQETLYNNYKQKEVLEKTILYLAEELYIPK TNYDIISKKGIFTHNQAKRRFGGFVDFSPCGSELALNQILTNIGGKFYEEDDWKDRFVTGWVLKKENKDLLKDSFHPTNG RGITKAEKVIFQHLEKTEKGFTPEEYRVKYTFRGKIKPSCVVLHYTAIPDYFRSLRTLEARNLTASIMIDTNGKAYQLVD VIEDRAAAATGTNDNCIQIEIVAKDTEELLKQPEQIQKVKDLVIELTTKYKIPLSNEKLEDLNGVFSHTQAKKKWGGSIF LNAKDFDPGEEYMELILNSIGGKYFPEPEWKNRSSMDWAILYRNFQP >Mature_446_residues SPLCQNLVIISLIFLIFTGCSSFFRRTPNFTTIQIPNLIPFSQVEGLKGDQWQKLSKQRDQKLVTAIILHNAGKRKFTDF LRLSIQNQFLFHLYVDANGTIFGDPKFLTQEWTAAPGIDTEAIHIVYEGTQETLYNNYKQKEVLEKTILYLAEELYIPKT NYDIISKKGIFTHNQAKRRFGGFVDFSPCGSELALNQILTNIGGKFYEEDDWKDRFVTGWVLKKENKDLLKDSFHPTNGR GITKAEKVIFQHLEKTEKGFTPEEYRVKYTFRGKIKPSCVVLHYTAIPDYFRSLRTLEARNLTASIMIDTNGKAYQLVDV IEDRAAAATGTNDNCIQIEIVAKDTEELLKQPEQIQKVKDLVIELTTKYKIPLSNEKLEDLNGVFSHTQAKKKWGGSIFL NAKDFDPGEEYMELILNSIGGKYFPEPEWKNRSSMDWAILYRNFQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.5.1.28
Molecular weight: Translated: 51482; Mature: 51350
Theoretical pI: Translated: 8.17; Mature: 8.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPLCQNLVIISLIFLIFTGCSSFFRRTPNFTTIQIPNLIPFSQVEGLKGDQWQKLSKQR CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHCCCCCHHHHHHHHHH DQKLVTAIILHNAGKRKFTDFLRLSIQNQFLFHLYVDANGTIFGDPKFLTQEWTAAPGID HHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEEEECCCCEEECCCCHHHHHCCCCCCCC TEAIHIVYEGTQETLYNNYKQKEVLEKTILYLAEELYIPKTNYDIISKKGIFTHNQAKRR CCEEEEEEECCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCHHHHH FGGFVDFSPCGSELALNQILTNIGGKFYEEDDWKDRFVTGWVLKKENKDLLKDSFHPTNG HCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCHHHHHHCCCCCCC RGITKAEKVIFQHLEKTEKGFTPEEYRVKYTFRGKIKPSCVVLHYTAIPDYFRSLRTLEA CCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCEEEEEEEHHHHHHHHHHHHHH RNLTASIMIDTNGKAYQLVDVIEDRAAAATGTNDNCIQIEIVAKDTEELLKQPEQIQKVK CCCEEEEEEECCCCEEEHHHHHHHHHHHCCCCCCCEEEEEEEECCHHHHHHCHHHHHHHH DLVIELTTKYKIPLSNEKLEDLNGVFSHTQAKKKWGGSIFLNAKDFDPGEEYMELILNSI HHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHH GGKYFPEPEWKNRSSMDWAILYRNFQP CCCCCCCCCCCCCCCCCEEEEEECCCC >Mature Secondary Structure SPLCQNLVIISLIFLIFTGCSSFFRRTPNFTTIQIPNLIPFSQVEGLKGDQWQKLSKQR CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHCCCCCHHHHHHHHHH DQKLVTAIILHNAGKRKFTDFLRLSIQNQFLFHLYVDANGTIFGDPKFLTQEWTAAPGID HHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEEEECCCCEEECCCCHHHHHCCCCCCCC TEAIHIVYEGTQETLYNNYKQKEVLEKTILYLAEELYIPKTNYDIISKKGIFTHNQAKRR CCEEEEEEECCHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCHHHHH FGGFVDFSPCGSELALNQILTNIGGKFYEEDDWKDRFVTGWVLKKENKDLLKDSFHPTNG HCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEECCCHHHHHHCCCCCCC RGITKAEKVIFQHLEKTEKGFTPEEYRVKYTFRGKIKPSCVVLHYTAIPDYFRSLRTLEA CCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCCCCCEEEEEEEHHHHHHHHHHHHHH RNLTASIMIDTNGKAYQLVDVIEDRAAAATGTNDNCIQIEIVAKDTEELLKQPEQIQKVK CCCEEEEEEECCCCEEEHHHHHHHHHHHCCCCCCCEEEEEEEECCHHHHHHCHHHHHHHH DLVIELTTKYKIPLSNEKLEDLNGVFSHTQAKKKWGGSIFLNAKDFDPGEEYMELILNSI HHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHH GGKYFPEPEWKNRSSMDWAILYRNFQP CCCCCCCCCCCCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA