| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is glnD [H]
Identifier: 183222729
GI number: 183222729
Start: 3504550
End: 3507102
Strand: Direct
Name: glnD [H]
Synonym: LEPBI_I3385
Alternate gene names: 183222729
Gene position: 3504550-3507102 (Clockwise)
Preceding gene: 183222712
Following gene: 183222730
Centisome position: 97.36
GC content: 37.72
Gene sequence:
>2553_bases ATGATGAAATCAGAACTCAAGGCAAAACTGCAACGGACCTTTCCAAAAGCCAAAACGGTATCATCGGGAAGGTTGTTTAC TCGTCAGTTGAGTAACCTTGTGGATGATTCCCTACGTAGTGTTTTTTTGGAAGTTTCCAATGGAATTCCTATCAAAGACC ATCTTTGTCTCATTGCAGTGGGTGGGTATGGAAGACGGGAACTTGCTCCCTATTCTGATATTGATCTTTTATACCTTCAT GATGGAAAACTTTCTGACAAAGTTTTAAGCGAAATCATCTCCAAAATCAATACCTTCTTATATAACAATGATAAGGAAGT GGGACATAGTTGCCGCACGATCAAAGAATCGTTTTTATACTTAAACCAAATTGAAACCTACCATGCAGTGCTCGATGCGC GGTTTTTGGTTGGTTCCGAACTTCTGTTTCAAAAGTTCAAAACTGATTTCCTTGGAAAAATTCCTGAAAAAACCATCAAA GAATACAATGAATGGAAACTTTCTTATCTTAGAGAAAGGATCATCAATTCCTACAATCCCATTCTTTTATCCGAACCCAA TATCAAAAATGATCCATTGGGCTTACGCGACATCCAACAAATGTATTGGATCGAAAAAACAAATCCCCTCGCCGATAGTG CAGACGGTGGGATTTTTGATTTTTATTTGATTGGTGATAGTTTAACTTTATTATCCGCTTACGATTTTTTACTCTTAGCA AGATCCGCACTCCACATCATTAGCGGTCGCAAAAATGACAGATTGGATTTGGGATTACAAGCTGAGGTGGCTGAATTTTT AGGATTCGGTCCAAAAAATGAAATCAAAACCTTAGAACGATTTATGAGCCAATTCTACAAGGCACAAAAGGATGTGTATT TTTATATTGGAACCTACTTGGATGAAAAAACAAATCTCAACAAAAAACGGATCCATAAAGAACTTTCCAATCCAGACACT CTTTATGATGACATCATCCAATTTTTTGCAGAGTCCCAAAAGAATGAAGAAGAACCATCTCGGATTGATTTAAACGAAAT TCGATTTGCATCCCATTTTTTGGATGATGATTTCAAAAATCAAAAATCAGTCCTCGACTGTTTTTTAGGGATGCTTCGCC ATAAAAAACGGATTGGTCATACTCTCACTCTGATGCACGAATGTAATGTGTTAGGGAAACTCATTCCAGAATTTGGAGCT TGCACCAATTTTCCACTGTTTAGTTACCACCACCAGTACACGGTTGACGAACACACTTTACTCATCTTACGAGAGTTAGA TGTATTGATTGCCGATTTGTGGGAAGACCCGCAAGTGCAAGAAGTATTCAATGTATGTGAAAAAATCGAAATTTTGGCTC TTGCCATCCTCATCCACGATGCAGGAAAAGTAAAGGAAGGAGACCATTGCCAATACGGTGCCGAACTTGCCCTCATCATT GCGGAACGATTCCGATTGTCTGAGGAAGACACCGAACTTTTACGATTTTTGGTCGCAGAACATATCGTCATGTCAGAATT ATCATCCAAACGTGATATTTATGACCCAAATCTCATTTCATCATTTGCAAAACAATTTTCAAATGAAAACACATTACGTT TGTTATATATAATGACCATCATTGATACAAAATCAGTTGGGCAATCCGTCCTCACGAATTGGAAAAAAGAAATTTTACAT TTTTTGTTCACCTCAACTCTCACTTACTTACAAAACAAAACCAATGTTTCAGATACCCAAGAAAGAATCGAAACCACTTT GGAAACCTACCTAGTAGAAAAAGAAGGTCTCACCGCCGAACAGGCAGAACAAATTGTAAACTTTGGAATGCAAATCCGAC CCAGTTCTTATTTGAACTATAATACCCCACGCAGGGTTTACCAACATTTTGTATTGTTACATGAATGGTTTGGCTCTGGT GCCAGGTTTCGTTTGATATCTGAAAAGGAACCAGCTTTTGTCACTTTATCGATTTTTGCGAACGCAGACAAACGAATGTT ACTGTATCTTTCGGGAATTATTTCCTCTCTTGGATTGAATTTGGTAGGACTTAGGCTTTTTCGAACTGAAAACGAACATC TGATCTTACAGGCACAAATCACGGATGAATTTGGAAGTGGAGAGATCGCAGAACAACAAATATTCGAAATTGAATCCGCT CTCGGTGAATGTATCGATGGGATTGTGAACATAGAGGATTTGGCATCCACAACCAATATTTGGAAAACATTACCTCAAAT CCCAGACGGAATGGTAGAAGAATTGGTGAAGTTTGCCAATGATTTGTCGGAAACATATTCTGTATTAGAAGTAAGAGTCC CCGACTCAATCGGGTTAGTGTATCGAATTTTAAAATCTTTAATTGATTTTGAACTGGAAGTAATCTTTGTTAGAATCTCA ACCAGTGCTGATTTTGCATATGACTCCTTTCATATCCAAACCAAAAATGGTAAAAAAATAGAAGATACAGGACTTCTGCT GGCGATCAAAGAAAAAATTCTCTCAGTCGCAAGAGTCAAAGAAAACCAAGGTATCATGGAGATTAGTTTTTAA
Upstream 100 bases:
>100_bases TGGAAACAAACAGATAAGCCAAAAGATGGCTGAAAATAAACTGAATTGTGATTTTAATCTTCGGATTCATGTTAAAGTTG TCCAATAAGGTAAGCTTAAC
Downstream 100 bases:
>100_bases TATGGCATGGTGGAAAGAAGCAGTCATCTATCAAATTTATCCACGTAGTTTCCAAGATTCCAATGGAGATGGCATCGGCG ATTTAGAAGGAATCATCCAA
Product: [protein-PII] uridylyltransferase
Products: NA
Alternate protein names: PII uridylyl-transferase; UTase; Uridylyl-removing enzyme [H]
Number of amino acids: Translated: 850; Mature: 850
Protein sequence:
>850_residues MMKSELKAKLQRTFPKAKTVSSGRLFTRQLSNLVDDSLRSVFLEVSNGIPIKDHLCLIAVGGYGRRELAPYSDIDLLYLH DGKLSDKVLSEIISKINTFLYNNDKEVGHSCRTIKESFLYLNQIETYHAVLDARFLVGSELLFQKFKTDFLGKIPEKTIK EYNEWKLSYLRERIINSYNPILLSEPNIKNDPLGLRDIQQMYWIEKTNPLADSADGGIFDFYLIGDSLTLLSAYDFLLLA RSALHIISGRKNDRLDLGLQAEVAEFLGFGPKNEIKTLERFMSQFYKAQKDVYFYIGTYLDEKTNLNKKRIHKELSNPDT LYDDIIQFFAESQKNEEEPSRIDLNEIRFASHFLDDDFKNQKSVLDCFLGMLRHKKRIGHTLTLMHECNVLGKLIPEFGA CTNFPLFSYHHQYTVDEHTLLILRELDVLIADLWEDPQVQEVFNVCEKIEILALAILIHDAGKVKEGDHCQYGAELALII AERFRLSEEDTELLRFLVAEHIVMSELSSKRDIYDPNLISSFAKQFSNENTLRLLYIMTIIDTKSVGQSVLTNWKKEILH FLFTSTLTYLQNKTNVSDTQERIETTLETYLVEKEGLTAEQAEQIVNFGMQIRPSSYLNYNTPRRVYQHFVLLHEWFGSG ARFRLISEKEPAFVTLSIFANADKRMLLYLSGIISSLGLNLVGLRLFRTENEHLILQAQITDEFGSGEIAEQQIFEIESA LGECIDGIVNIEDLASTTNIWKTLPQIPDGMVEELVKFANDLSETYSVLEVRVPDSIGLVYRILKSLIDFELEVIFVRIS TSADFAYDSFHIQTKNGKKIEDTGLLLAIKEKILSVARVKENQGIMEISF
Sequences:
>Translated_850_residues MMKSELKAKLQRTFPKAKTVSSGRLFTRQLSNLVDDSLRSVFLEVSNGIPIKDHLCLIAVGGYGRRELAPYSDIDLLYLH DGKLSDKVLSEIISKINTFLYNNDKEVGHSCRTIKESFLYLNQIETYHAVLDARFLVGSELLFQKFKTDFLGKIPEKTIK EYNEWKLSYLRERIINSYNPILLSEPNIKNDPLGLRDIQQMYWIEKTNPLADSADGGIFDFYLIGDSLTLLSAYDFLLLA RSALHIISGRKNDRLDLGLQAEVAEFLGFGPKNEIKTLERFMSQFYKAQKDVYFYIGTYLDEKTNLNKKRIHKELSNPDT LYDDIIQFFAESQKNEEEPSRIDLNEIRFASHFLDDDFKNQKSVLDCFLGMLRHKKRIGHTLTLMHECNVLGKLIPEFGA CTNFPLFSYHHQYTVDEHTLLILRELDVLIADLWEDPQVQEVFNVCEKIEILALAILIHDAGKVKEGDHCQYGAELALII AERFRLSEEDTELLRFLVAEHIVMSELSSKRDIYDPNLISSFAKQFSNENTLRLLYIMTIIDTKSVGQSVLTNWKKEILH FLFTSTLTYLQNKTNVSDTQERIETTLETYLVEKEGLTAEQAEQIVNFGMQIRPSSYLNYNTPRRVYQHFVLLHEWFGSG ARFRLISEKEPAFVTLSIFANADKRMLLYLSGIISSLGLNLVGLRLFRTENEHLILQAQITDEFGSGEIAEQQIFEIESA LGECIDGIVNIEDLASTTNIWKTLPQIPDGMVEELVKFANDLSETYSVLEVRVPDSIGLVYRILKSLIDFELEVIFVRIS TSADFAYDSFHIQTKNGKKIEDTGLLLAIKEKILSVARVKENQGIMEISF >Mature_850_residues MMKSELKAKLQRTFPKAKTVSSGRLFTRQLSNLVDDSLRSVFLEVSNGIPIKDHLCLIAVGGYGRRELAPYSDIDLLYLH DGKLSDKVLSEIISKINTFLYNNDKEVGHSCRTIKESFLYLNQIETYHAVLDARFLVGSELLFQKFKTDFLGKIPEKTIK EYNEWKLSYLRERIINSYNPILLSEPNIKNDPLGLRDIQQMYWIEKTNPLADSADGGIFDFYLIGDSLTLLSAYDFLLLA RSALHIISGRKNDRLDLGLQAEVAEFLGFGPKNEIKTLERFMSQFYKAQKDVYFYIGTYLDEKTNLNKKRIHKELSNPDT LYDDIIQFFAESQKNEEEPSRIDLNEIRFASHFLDDDFKNQKSVLDCFLGMLRHKKRIGHTLTLMHECNVLGKLIPEFGA CTNFPLFSYHHQYTVDEHTLLILRELDVLIADLWEDPQVQEVFNVCEKIEILALAILIHDAGKVKEGDHCQYGAELALII AERFRLSEEDTELLRFLVAEHIVMSELSSKRDIYDPNLISSFAKQFSNENTLRLLYIMTIIDTKSVGQSVLTNWKKEILH FLFTSTLTYLQNKTNVSDTQERIETTLETYLVEKEGLTAEQAEQIVNFGMQIRPSSYLNYNTPRRVYQHFVLLHEWFGSG ARFRLISEKEPAFVTLSIFANADKRMLLYLSGIISSLGLNLVGLRLFRTENEHLILQAQITDEFGSGEIAEQQIFEIESA LGECIDGIVNIEDLASTTNIWKTLPQIPDGMVEELVKFANDLSETYSVLEVRVPDSIGLVYRILKSLIDFELEVIFVRIS TSADFAYDSFHIQTKNGKKIEDTGLLLAIKEKILSVARVKENQGIMEISF
Specific function: Modifies, by uridylylation or deuridylylation the PII (glnB) regulatory protein [H]
COG id: COG2844
COG function: function code O; UTP:GlnB (protein PII) uridylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glnD family [H]
Homologues:
Organism=Escherichia coli, GI1786363, Length=841, Percent_Identity=25.3269916765755, Blast_Score=212, Evalue=1e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR010043 - InterPro: IPR003607 - InterPro: IPR013546 [H]
Pfam domain/function: PF01842 ACT; PF08335 GlnD_UR_UTase [H]
EC number: =2.7.7.59 [H]
Molecular weight: Translated: 97630; Mature: 97630
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKSELKAKLQRTFPKAKTVSSGRLFTRQLSNLVDDSLRSVFLEVSNGIPIKDHLCLIAV CCHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE GGYGRRELAPYSDIDLLYLHDGKLSDKVLSEIISKINTFLYNNDKEVGHSCRTIKESFLY CCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH LNQIETYHAVLDARFLVGSELLFQKFKTDFLGKIPEKTIKEYNEWKLSYLRERIINSYNP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC ILLSEPNIKNDPLGLRDIQQMYWIEKTNPLADSADGGIFDFYLIGDSLTLLSAYDFLLLA EEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHH RSALHIISGRKNDRLDLGLQAEVAEFLGFGPKNEIKTLERFMSQFYKAQKDVYFYIGTYL HHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEHH DEKTNLNKKRIHKELSNPDTLYDDIIQFFAESQKNEEEPSRIDLNEIRFASHFLDDDFKN CCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHCC QKSVLDCFLGMLRHKKRIGHTLTLMHECNVLGKLIPEFGACTNFPLFSYHHQYTVDEHTL HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCHHH LILRELDVLIADLWEDPQVQEVFNVCEKIEILALAILIHDAGKVKEGDHCQYGAELALII HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH AERFRLSEEDTELLRFLVAEHIVMSELSSKRDIYDPNLISSFAKQFSNENTLRLLYIMTI HHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEHH IDTKSVGQSVLTNWKKEILHFLFTSTLTYLQNKTNVSDTQERIETTLETYLVEKEGLTAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHH QAEQIVNFGMQIRPSSYLNYNTPRRVYQHFVLLHEWFGSGARFRLISEKEPAFVTLSIFA HHHHHHHCCCEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEEE NADKRMLLYLSGIISSLGLNLVGLRLFRTENEHLILQAQITDEFGSGEIAEQQIFEIESA CCCCHHHHHHHHHHHHHCHHHHEEEEEEECCCEEEEEEEECCCCCCCCHHHHHHHHHHHH LGECIDGIVNIEDLASTTNIWKTLPQIPDGMVEELVKFANDLSETYSVLEVRVPDSIGLV HHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHH YRILKSLIDFELEVIFVRISTSADFAYDSFHIQTKNGKKIEDTGLLLAIKEKILSVARVK HHHHHHHHCCEEEEEEEEEECCCCCEECEEEEECCCCCEECCCCHHHHHHHHHHHHHHHH ENQGIMEISF CCCCCEEECC >Mature Secondary Structure MMKSELKAKLQRTFPKAKTVSSGRLFTRQLSNLVDDSLRSVFLEVSNGIPIKDHLCLIAV CCHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE GGYGRRELAPYSDIDLLYLHDGKLSDKVLSEIISKINTFLYNNDKEVGHSCRTIKESFLY CCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH LNQIETYHAVLDARFLVGSELLFQKFKTDFLGKIPEKTIKEYNEWKLSYLRERIINSYNP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCC ILLSEPNIKNDPLGLRDIQQMYWIEKTNPLADSADGGIFDFYLIGDSLTLLSAYDFLLLA EEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHH RSALHIISGRKNDRLDLGLQAEVAEFLGFGPKNEIKTLERFMSQFYKAQKDVYFYIGTYL HHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEHH DEKTNLNKKRIHKELSNPDTLYDDIIQFFAESQKNEEEPSRIDLNEIRFASHFLDDDFKN CCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHCC QKSVLDCFLGMLRHKKRIGHTLTLMHECNVLGKLIPEFGACTNFPLFSYHHQYTVDEHTL HHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEECCCHHH LILRELDVLIADLWEDPQVQEVFNVCEKIEILALAILIHDAGKVKEGDHCQYGAELALII HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHH AERFRLSEEDTELLRFLVAEHIVMSELSSKRDIYDPNLISSFAKQFSNENTLRLLYIMTI HHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEHH IDTKSVGQSVLTNWKKEILHFLFTSTLTYLQNKTNVSDTQERIETTLETYLVEKEGLTAE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCHH QAEQIVNFGMQIRPSSYLNYNTPRRVYQHFVLLHEWFGSGARFRLISEKEPAFVTLSIFA HHHHHHHCCCEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEEE NADKRMLLYLSGIISSLGLNLVGLRLFRTENEHLILQAQITDEFGSGEIAEQQIFEIESA CCCCHHHHHHHHHHHHHCHHHHEEEEEEECCCEEEEEEEECCCCCCCCHHHHHHHHHHHH LGECIDGIVNIEDLASTTNIWKTLPQIPDGMVEELVKFANDLSETYSVLEVRVPDSIGLV HHHHHHHHCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHEEEEECCCHHHHH YRILKSLIDFELEVIFVRISTSADFAYDSFHIQTKNGKKIEDTGLLLAIKEKILSVARVK HHHHHHHHCCEEEEEEEEEECCCCCEECEEEEECCCCCEECCCCHHHHHHHHHHHHHHHH ENQGIMEISF CCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA