Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
---|---|
Accession | NC_010602 |
Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183222641
Identifier: 183222641
GI number: 183222641
Start: 3408652
End: 3409593
Strand: Direct
Name: 183222641
Synonym: LEPBI_I3296
Alternate gene names: NA
Gene position: 3408652-3409593 (Clockwise)
Preceding gene: 183222640
Following gene: 183222646
Centisome position: 94.69
GC content: 42.68
Gene sequence:
>942_bases ATGAAAATCAAAACAAAAATCAGTGAAATGCTAAAAATTGATCTACCGATCATCGCAGCACCCATGTTCCTCGTCTCCTA TCCGGAGTTAGTAGTAGCCGTTTCGGAAGCAGGTGGAATTGGTTGTTTTCCTTCCCTCAATTACCGGACCCCCGAACAAT TACGCGAAGGAATCCTCGAAATTCGTTCCAAAACCAAAAAACCAATCGGTGTGAATTTGATCCTCCATAAGGAACATAAT CCTAATTGGGCCAAACAATTTGAAGTTGTTATGGACTTAAAAGTAGAGCTAATCATTACAAGTCTTGGTACCCCTCGCAC CATTGCCAAAGAAATCAAAGCCAATGGATCTTCTTTGTTCTGTGATGTAACAACATTAAAACACGCAAACATTGTCGCTA AGTCTGGTGCAGATGCGCTCATTGCCGTATCACAAGGTGCGGGTGGTCATGCTGGAGCCATTACCCCTTTTGCACTCATA CCATATCTTAAAAAAGAAACAGGTCTTCCTGTCATTGCCGCTGGAGCCATTTCCAATGGTTCACAAATGGCCGCTGCCTT ATCTCTCGGAGCAGATGCAGTGTACATTGGAACTCGCTTCATCGCCACTCCAGAATCACGTGCGCAAAACGAATACAAAC AAATGTTAATTGATTCAAGTCCAGATGAGATTGTTTATACCGAAAAAATTTCTGGGATTCCTGCCAATTGGTTGGCAAAG TCTGTAGAAAAGTCCCCTGATATTTTAGAAGACAGTCCTAAAAAAATTGCGGCAGGTCATGCAGGTGGCGAACAAGCGAT TGAACAAGAATACAAACGTTGGCGAGACATTTGGTCTGCAGGGCAAGGTGTTGCTCAGATCGAAGAAGTCAAACCTGCAG GTGAAATTGTAAAAGAAATTGCGAACGAATACCTAAATACAATCAATTCACTTCCTCGCTAA
Upstream 100 bases:
>100_bases ATTTGCAATGAGTTGTATTCCCAGGTCTGGTCGGTATCCATCTGAACTGCCCAACCTAACTCCGAAACCAACCCAACCAT AATCGTATAACAGGAGATTT
Downstream 100 bases:
>100_bases ATTCGCTAAACAAATGTAATGCGAATCTTATTTAAATAAAGATTCGCATTTTTTTACTCATTCATTATTTTTTTGCAATT TTCGAATGGTTTCGATCATT
Product: putative 2-nitropropane dioxygenase
Products: NA
Alternate protein names: Nitroalkane oxidase [H]
Number of amino acids: Translated: 313; Mature: 313
Protein sequence:
>313_residues MKIKTKISEMLKIDLPIIAAPMFLVSYPELVVAVSEAGGIGCFPSLNYRTPEQLREGILEIRSKTKKPIGVNLILHKEHN PNWAKQFEVVMDLKVELIITSLGTPRTIAKEIKANGSSLFCDVTTLKHANIVAKSGADALIAVSQGAGGHAGAITPFALI PYLKKETGLPVIAAGAISNGSQMAAALSLGADAVYIGTRFIATPESRAQNEYKQMLIDSSPDEIVYTEKISGIPANWLAK SVEKSPDILEDSPKKIAAGHAGGEQAIEQEYKRWRDIWSAGQGVAQIEEVKPAGEIVKEIANEYLNTINSLPR
Sequences:
>Translated_313_residues MKIKTKISEMLKIDLPIIAAPMFLVSYPELVVAVSEAGGIGCFPSLNYRTPEQLREGILEIRSKTKKPIGVNLILHKEHN PNWAKQFEVVMDLKVELIITSLGTPRTIAKEIKANGSSLFCDVTTLKHANIVAKSGADALIAVSQGAGGHAGAITPFALI PYLKKETGLPVIAAGAISNGSQMAAALSLGADAVYIGTRFIATPESRAQNEYKQMLIDSSPDEIVYTEKISGIPANWLAK SVEKSPDILEDSPKKIAAGHAGGEQAIEQEYKRWRDIWSAGQGVAQIEEVKPAGEIVKEIANEYLNTINSLPR >Mature_313_residues MKIKTKISEMLKIDLPIIAAPMFLVSYPELVVAVSEAGGIGCFPSLNYRTPEQLREGILEIRSKTKKPIGVNLILHKEHN PNWAKQFEVVMDLKVELIITSLGTPRTIAKEIKANGSSLFCDVTTLKHANIVAKSGADALIAVSQGAGGHAGAITPFALI PYLKKETGLPVIAAGAISNGSQMAAALSLGADAVYIGTRFIATPESRAQNEYKQMLIDSSPDEIVYTEKISGIPANWLAK SVEKSPDILEDSPKKIAAGHAGGEQAIEQEYKRWRDIWSAGQGVAQIEEVKPAGEIVKEIANEYLNTINSLPR
Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitronate monooxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR013785 [H]
Pfam domain/function: PF03060 NPD [H]
EC number: =1.13.12.16 [H]
Molecular weight: Translated: 33738; Mature: 33738
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIKTKISEMLKIDLPIIAAPMFLVSYPELVVAVSEAGGIGCFPSLNYRTPEQLREGILE CCCHHHHHHHHHHCCCHHHHHHHHHCCCHHEEEEECCCCEECCCCCCCCCHHHHHHHHHH IRSKTKKPIGVNLILHKEHNPNWAKQFEVVMDLKVELIITSLGTPRTIAKEIKANGSSLF HHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHCEEEEEEECCCCCHHHHHHHHCCCCEEE CDVTTLKHANIVAKSGADALIAVSQGAGGHAGAITPFALIPYLKKETGLPVIAAGAISNG EEEEECCCCCEEECCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCC SQMAAALSLGADAVYIGTRFIATPESRAQNEYKQMLIDSSPDEIVYTEKISGIPANWLAK HHHHHHHHCCCCEEEECEEEEECCHHHHHHHHHHHHCCCCCCCEEEEHHCCCCCHHHHHH SVEKSPDILEDSPKKIAAGHAGGEQAIEQEYKRWRDIWSAGQGVAQIEEVKPAGEIVKEI HHHCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHH ANEYLNTINSLPR HHHHHHHHHCCCC >Mature Secondary Structure MKIKTKISEMLKIDLPIIAAPMFLVSYPELVVAVSEAGGIGCFPSLNYRTPEQLREGILE CCCHHHHHHHHHHCCCHHHHHHHHHCCCHHEEEEECCCCEECCCCCCCCCHHHHHHHHHH IRSKTKKPIGVNLILHKEHNPNWAKQFEVVMDLKVELIITSLGTPRTIAKEIKANGSSLF HHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHCEEEEEEECCCCCHHHHHHHHCCCCEEE CDVTTLKHANIVAKSGADALIAVSQGAGGHAGAITPFALIPYLKKETGLPVIAAGAISNG EEEEECCCCCEEECCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCC SQMAAALSLGADAVYIGTRFIATPESRAQNEYKQMLIDSSPDEIVYTEKISGIPANWLAK HHHHHHHHCCCCEEEECEEEEECCHHHHHHHHHHHHCCCCCCCEEEEHHCCCCCHHHHHH SVEKSPDILEDSPKKIAAGHAGGEQAIEQEYKRWRDIWSAGQGVAQIEEVKPAGEIVKEI HHHCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHCCCHHHHHHHH ANEYLNTINSLPR HHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA