Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183222646
Identifier: 183222646
GI number: 183222646
Start: 3414147
End: 3416024
Strand: Direct
Name: 183222646
Synonym: LEPBI_I3301
Alternate gene names: NA
Gene position: 3414147-3416024 (Clockwise)
Preceding gene: 183222641
Following gene: 183222648
Centisome position: 94.85
GC content: 37.75
Gene sequence:
>1878_bases ATGGCACTTGAAGAAAATACATTGGAAGATCGATTGATCAAAATTTCCACAAGAGAAAGTAACAAAAATCTCATGGTGAG TCCGGATAAAATTTATATTTTTCCTGTTCCCAAAACGACCTTCCAATTTTTGGAGAATATTTGGCAATCCTTCACGAATA AAATGGTTTCACTTGTGGATTATAACGATGATCCCATTTTTAATTTTTCCATTTTTGAGGTCATTGACCAAGATGAAATG AAAATTGTGGCGACTGCCACTCACTTTAAACTCAAAGAAATTGCAGAACGCCGAAAGATCCCAGGGATCGAAGAATACAT CAAAAAATCGAGACCCATCCATTTGGCCGACCCTAGAAATGAATCAGCACGTTTCATTCGAAAAGCGATCATCGATTTTA ACAAAGGACTCCGCCCTGAAGTCACCTTTGTGAATCTGAAAGAAGAAGAGATCCATCCTGAAAAAAAAGTCTTACTTTCT GAAACAATGAACCATGCAATCGGGATTCCACTGTTTGTGAATGAAAACCCGATCGGAATTCTATGGGGCATCACAAAAGA TCCAATTTCGGAAGAACAAATCCGCCCCCTTACGTTACAATTGTATTCACTCTTTGATGTCATTGAGTTTGTCGTGGCAA AGGAAATGGAATCAGGAAACGACCATTACATTGCTCAAAAAAATATCGAAAAAGCGGATACCGTTTCAAATTCAAGAAAT CTTTTTTACACCACCACTAAAGACCAAAAAGAACCAGTTACATCCATCATCTTCAAATCTCACCAATATAACATTGAATA TAGAATGGATGCATCGTTCATCATTCCAACAACAGATGGTTATGCAGTTTCACTCAAAAGTTTTATCCCAGAAAAACTAA ACAACACAGGCAAAAATTTGTTACTCATCCCTGGATTTTTTTGCCGGCGTTCCGTCATGGACAAACTCGCAAAAGAATTA GCGCTCAAATACGGATACCGAGTGTTCCTGATGGACATGCGTGGTCGGTCTAGGCAAACCATGCCAAAACACGGAAAAAA AGAAGGATGGACCGTCGACAATTACATCCAAGACGATTTTCCAGAAGTGTTACGATGGATTCGCTGGCACTATCCAAGTG AAAGAACAGTTGTCGTTGGACACAGTATGGGAGGCATGATCCCTAGGTTTTATGTTTCTTCTTACGAAAAAATCAAAGAA CTCAAAGAAGAATTCAATTTACCACAACCAGAAGAATACATTGCGGGCATTGTATCAATCACCTCGCCCAACTACATCAG TTTGAAGTCCAATTTCATTGGGTTGGATACACTAAAAAGAGGATTTAACTTACTTCCACATAAAATGATTTCCGATATGA TTTTGAGTATGGCAAGTTTTTCCATGCAAGCCACAATCCAAACCATCGATCTCAAAAAATTCTTCAAATTGATTTTAAAC CTTCACTCCAGTTTACGAAGTTTTAGTTATAATATTGGAACAAAAGTATTAACCATCAAAGACTTCGTTGGTTATAAAGA AATCACTCCTCCTGAATGGTATTTTCTCATGGAAGACGTGTTTTGCGAAGAATCAGTGTCCGTGATCATGCAATTTTTCC AAAGCCAAATCTCCAATGAACAAAGTTTTTGGTCCAATGATGGGCGGATCAACTATACAGAGAATTTTTTAAACAACTTC ACAATGCCAATTTATAGTGTGGTAGGAACTGTAGACAAAATTGTACCGGAGGAAAGTTTAGCAGAACTGAAAGACCTCAA ATCGGAAAACAAAGTCACGACTTATTATGAACAAGGCCATCTTGGGATCATTTTCCATGGAGAAACCGTAAGAAAAATTT GTAAGGGAATGGATGAGTGGATCCAAGGTTTAAAATAA
Upstream 100 bases:
>100_bases TTGTTGCATATTAGCTTTATTTTTTAGTTCACAGGCATATGAAAAGTCGAAAATAGAGTTATAGCGGACAGTAACGGCAG ATAAATAGAAAGGATGCTAA
Downstream 100 bases:
>100_bases CCTTCCTTTCCCCTAACGTCCGCTAAACCGGTTGCGAATCAGTTCCATTTCTTTCAGAAGTGTAGCATCGCGACCGGCTA AAAAATAGGCACCTCTCACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 625; Mature: 624
Protein sequence:
>625_residues MALEENTLEDRLIKISTRESNKNLMVSPDKIYIFPVPKTTFQFLENIWQSFTNKMVSLVDYNDDPIFNFSIFEVIDQDEM KIVATATHFKLKEIAERRKIPGIEEYIKKSRPIHLADPRNESARFIRKAIIDFNKGLRPEVTFVNLKEEEIHPEKKVLLS ETMNHAIGIPLFVNENPIGILWGITKDPISEEQIRPLTLQLYSLFDVIEFVVAKEMESGNDHYIAQKNIEKADTVSNSRN LFYTTTKDQKEPVTSIIFKSHQYNIEYRMDASFIIPTTDGYAVSLKSFIPEKLNNTGKNLLLIPGFFCRRSVMDKLAKEL ALKYGYRVFLMDMRGRSRQTMPKHGKKEGWTVDNYIQDDFPEVLRWIRWHYPSERTVVVGHSMGGMIPRFYVSSYEKIKE LKEEFNLPQPEEYIAGIVSITSPNYISLKSNFIGLDTLKRGFNLLPHKMISDMILSMASFSMQATIQTIDLKKFFKLILN LHSSLRSFSYNIGTKVLTIKDFVGYKEITPPEWYFLMEDVFCEESVSVIMQFFQSQISNEQSFWSNDGRINYTENFLNNF TMPIYSVVGTVDKIVPEESLAELKDLKSENKVTTYYEQGHLGIIFHGETVRKICKGMDEWIQGLK
Sequences:
>Translated_625_residues MALEENTLEDRLIKISTRESNKNLMVSPDKIYIFPVPKTTFQFLENIWQSFTNKMVSLVDYNDDPIFNFSIFEVIDQDEM KIVATATHFKLKEIAERRKIPGIEEYIKKSRPIHLADPRNESARFIRKAIIDFNKGLRPEVTFVNLKEEEIHPEKKVLLS ETMNHAIGIPLFVNENPIGILWGITKDPISEEQIRPLTLQLYSLFDVIEFVVAKEMESGNDHYIAQKNIEKADTVSNSRN LFYTTTKDQKEPVTSIIFKSHQYNIEYRMDASFIIPTTDGYAVSLKSFIPEKLNNTGKNLLLIPGFFCRRSVMDKLAKEL ALKYGYRVFLMDMRGRSRQTMPKHGKKEGWTVDNYIQDDFPEVLRWIRWHYPSERTVVVGHSMGGMIPRFYVSSYEKIKE LKEEFNLPQPEEYIAGIVSITSPNYISLKSNFIGLDTLKRGFNLLPHKMISDMILSMASFSMQATIQTIDLKKFFKLILN LHSSLRSFSYNIGTKVLTIKDFVGYKEITPPEWYFLMEDVFCEESVSVIMQFFQSQISNEQSFWSNDGRINYTENFLNNF TMPIYSVVGTVDKIVPEESLAELKDLKSENKVTTYYEQGHLGIIFHGETVRKICKGMDEWIQGLK >Mature_624_residues ALEENTLEDRLIKISTRESNKNLMVSPDKIYIFPVPKTTFQFLENIWQSFTNKMVSLVDYNDDPIFNFSIFEVIDQDEMK IVATATHFKLKEIAERRKIPGIEEYIKKSRPIHLADPRNESARFIRKAIIDFNKGLRPEVTFVNLKEEEIHPEKKVLLSE TMNHAIGIPLFVNENPIGILWGITKDPISEEQIRPLTLQLYSLFDVIEFVVAKEMESGNDHYIAQKNIEKADTVSNSRNL FYTTTKDQKEPVTSIIFKSHQYNIEYRMDASFIIPTTDGYAVSLKSFIPEKLNNTGKNLLLIPGFFCRRSVMDKLAKELA LKYGYRVFLMDMRGRSRQTMPKHGKKEGWTVDNYIQDDFPEVLRWIRWHYPSERTVVVGHSMGGMIPRFYVSSYEKIKEL KEEFNLPQPEEYIAGIVSITSPNYISLKSNFIGLDTLKRGFNLLPHKMISDMILSMASFSMQATIQTIDLKKFFKLILNL HSSLRSFSYNIGTKVLTIKDFVGYKEITPPEWYFLMEDVFCEESVSVIMQFFQSQISNEQSFWSNDGRINYTENFLNNFT MPIYSVVGTVDKIVPEESLAELKDLKSENKVTTYYEQGHLGIIFHGETVRKICKGMDEWIQGLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72643; Mature: 72511
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALEENTLEDRLIKISTRESNKNLMVSPDKIYIFPVPKTTFQFLENIWQSFTNKMVSLVD CCCCCCCCCCCEEEEEECCCCCCEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHEEEEE YNDDPIFNFSIFEVIDQDEMKIVATATHFKLKEIAERRKIPGIEEYIKKSRPIHLADPRN CCCCCEEEEHHHHHHCCCCEEEEEEEHHHHHHHHHHHHCCCCHHHHHHHCCCEEECCCCC ESARFIRKAIIDFNKGLRPEVTFVNLKEEEIHPEKKVLLSETMNHAIGIPLFVNENPIGI HHHHHHHHHHHHHCCCCCCCEEEEECCHHHCCCHHHHHHHHHHHHHCCCEEEECCCCCEE LWGITKDPISEEQIRPLTLQLYSLFDVIEFVVAKEMESGNDHYIAQKNIEKADTVSNSRN EECCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHCCCCCC LFYTTTKDQKEPVTSIIFKSHQYNIEYRMDASFIIPTTDGYAVSLKSFIPEKLNNTGKNL EEEEECCCCCCHHHHHHHHCCCEEEEEEECCEEEEECCCCCEEEHHHHCHHHHCCCCCEE LLIPGFFCRRSVMDKLAKELALKYGYRVFLMDMRGRSRQTMPKHGKKEGWTVDNYIQDDF EEECCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCEEHHHHHCCH PEVLRWIRWHYPSERTVVVGHSMGGMIPRFYVSSYEKIKELKEEFNLPQPEEYIAGIVSI HHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHEEE TSPNYISLKSNFIGLDTLKRGFNLLPHKMISDMILSMASFSMQATIQTIDLKKFFKLILN CCCCEEEEECCEECHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LHSSLRSFSYNIGTKVLTIKDFVGYKEITPPEWYFLMEDVFCEESVSVIMQFFQSQISNE HHHHHHHHHHCCCCEEEEEHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC QSFWSNDGRINYTENFLNNFTMPIYSVVGTVDKIVPEESLAELKDLKSENKVTTYYEQGH CHHCCCCCEEEEHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEECCC LGIIFHGETVRKICKGMDEWIQGLK EEEEEECHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ALEENTLEDRLIKISTRESNKNLMVSPDKIYIFPVPKTTFQFLENIWQSFTNKMVSLVD CCCCCCCCCCEEEEEECCCCCCEEECCCEEEEEECCHHHHHHHHHHHHHHHHHHEEEEE YNDDPIFNFSIFEVIDQDEMKIVATATHFKLKEIAERRKIPGIEEYIKKSRPIHLADPRN CCCCCEEEEHHHHHHCCCCEEEEEEEHHHHHHHHHHHHCCCCHHHHHHHCCCEEECCCCC ESARFIRKAIIDFNKGLRPEVTFVNLKEEEIHPEKKVLLSETMNHAIGIPLFVNENPIGI HHHHHHHHHHHHHCCCCCCCEEEEECCHHHCCCHHHHHHHHHHHHHCCCEEEECCCCCEE LWGITKDPISEEQIRPLTLQLYSLFDVIEFVVAKEMESGNDHYIAQKNIEKADTVSNSRN EECCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHCCCCCC LFYTTTKDQKEPVTSIIFKSHQYNIEYRMDASFIIPTTDGYAVSLKSFIPEKLNNTGKNL EEEEECCCCCCHHHHHHHHCCCEEEEEEECCEEEEECCCCCEEEHHHHCHHHHCCCCCEE LLIPGFFCRRSVMDKLAKELALKYGYRVFLMDMRGRSRQTMPKHGKKEGWTVDNYIQDDF EEECCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCEEHHHHHCCH PEVLRWIRWHYPSERTVVVGHSMGGMIPRFYVSSYEKIKELKEEFNLPQPEEYIAGIVSI HHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHEEE TSPNYISLKSNFIGLDTLKRGFNLLPHKMISDMILSMASFSMQATIQTIDLKKFFKLILN CCCCEEEEECCEECHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LHSSLRSFSYNIGTKVLTIKDFVGYKEITPPEWYFLMEDVFCEESVSVIMQFFQSQISNE HHHHHHHHHHCCCCEEEEEHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC QSFWSNDGRINYTENFLNNFTMPIYSVVGTVDKIVPEESLAELKDLKSENKVTTYYEQGH CHHCCCCCEEEEHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEECCC LGIIFHGETVRKICKGMDEWIQGLK EEEEEECHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA