| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183222372
Identifier: 183222372
GI number: 183222372
Start: 3137250
End: 3139223
Strand: Reverse
Name: 183222372
Synonym: LEPBI_I3026
Alternate gene names: NA
Gene position: 3139223-3137250 (Counterclockwise)
Preceding gene: 183222373
Following gene: 183222371
Centisome position: 87.21
GC content: 38.25
Gene sequence:
>1974_bases ATGGAAAATACCAAAAAGATATTTTTAGGGATCTTTCTGGCAATGTTCTTAACCTTTGGTTTGAATTTTTGCAACTCAGA AGACCCTGCTAACTCGGCATTTGTGCATGTCACAATGATGGACAATGCTTTTCATCCACCAGTGATCCGTACCTACAAAG GTGGGAAAATTCGTTTTGTGAATGAGGGAAATAACCCACACAATGCAATTTCCATTAACAAGGACTGGTCAACTGAAACT ACATATGGCAACTTAGCGATGTTTCGTGGGGCACATACGGATGTGTTTTTTCCAGAGGAAGGTGTGTTCCCTTATTTTTG TTCCTTTCATGCTTCTCCGGATGGAAAGATAGGTATGACAGGTGTTGCTGTCATTGGAGACGCGTCTTACAACCCTCAGG CGAACACCGCAAAATCAAAAATCTCTAAAAAATGGACTGGGATCACAAGAAAGGTTCCATCTCAATACAAAACCATTCAA AATGCAGTGGATGCCGCATCCCCTGGTGATTTGGTATTAGTTGCAAAAGGGATTTATAAAGAAGAAGTGACTGTCACAAC ACCTTCTATTACCATTCGAGGTGAAGATCGTAATCTAACCATCATCGATGGAGAATTCCTAAGAGGGAATGGTATTATGG TTGTTGGAGCCGATGGAGTAGCAGTTGAAAACATCACAACAAGAAATGCGACACTTAATGGAGTCTATTGGACTGGTGTG AAAGGTTATCGCGGATCTTATATTACAGCATACAATAATGGTGATTATGGTGTATATGCTTTTGATTCTGTTGATGGACT AATTGAACATTCTTATGCATCCGGTTCGCCTGATTCAGGTTTTTATATAGGTCAGTGTAATCCATGTAATGCGATAATTC ATGATGTGATTTCGGAAAATAATGCCTTGGGATATTCTGGAACCAATTCAAGCGGGAATATCTACTTGTTGTCATCCATT TGGAGAAAAAACCAATTAGGAATTGGCCCCAATACATTAGATAGAGAATTGTTACCGCCACAGAAACAGATGGTTGTGAA AAAAAATATTGTTTATGATAACAATAATACAAACGCACCTTCTAAAAAATTGGAATATCCTTCCATCGGAAATGGAATCG CCTTACTTGGTGCATTGGAAAATATTGTAGAAGACAACTTAGTTTTTAATCACAATAATTACGGTATCCTTGTGACGATG AATATCGATGAGAACATTTGGATTTCCAATAATAATATTGTTCGTAACAACAAAGTGTATCATTCTGGTAGAGGGGACAT TGCTCTCAGTGGACCTGTAAATGTAGGGAATTGTTTTGAAGGTAATTCTTATGGAGTATCGAGCCCTCCTTTTCTCGAAT CCTTACAATCTTGTTCCGGTATTCGATATCCTCATATAGGTGATATGTCTTCTAGTATCGGTCTCCTTGCATTGTTTGTT CAGGCAAATTTAAAAGAATTTGTTTTGGGTTCATACAAAAACCAACCAATTCCAAGTTCGCAATTGAATATGCCAACGGA AGCTCAATCGAAAATTATACCAGCACATGACGTATTCGATTCGTACAAAGGACTCATTGAATCCGCTGAACTTCCTAAAC TTGACAAAAAAGATTTTGAAACAGAAACAAACAAGATGTACACTTCTGGTTGGAGAGTTCATTTCCCTGGTACGTTAAAA ACTTGGTACTTCCATATCATGGGATTCCTCCTGCCATTTGCCATCTTTGCCGCATGGACAGGACTTGCCATCTTGGATCG ATTTTCGGTGAAAGGATCAAAAGTTGATTTATACTTTTGGATGATTTTGCTTCTACCATTTATTGGTTCTTTGGTCTATT TATTCTCAAAGGAATCGAAAGTATCACCAGTGGTTAGAAATACCGTCGTATTTGGTGGTATTTTACTATTTTTAACAATT CTGGCTTATGCCGGTTATGCGATGACTGCGGTTACAGAACCGTCAATTACTTAA
Upstream 100 bases:
>100_bases GTATATTTTTCCAGTTTTCAATGATTTAACATTGACAAAGTTTTAACACAATTCTAAAATTCTCCAAATGTGAGGTATCC CTCACGTTTCGGGAAAAACT
Downstream 100 bases:
>100_bases TAGGAGTTTTATTATGGAAACAAATTTTGCAAATCCAAGTTTTTGGACCTACTTTATCGGATCTTATGCTTACTACTTAC CATTCGTTTTAACGATGGTT
Product: putative signal peptide
Products: NA
Alternate protein names: Plastocyanin; Signal Peptide; Cytochrome-C Peroxidase
Number of amino acids: Translated: 657; Mature: 657
Protein sequence:
>657_residues MENTKKIFLGIFLAMFLTFGLNFCNSEDPANSAFVHVTMMDNAFHPPVIRTYKGGKIRFVNEGNNPHNAISINKDWSTET TYGNLAMFRGAHTDVFFPEEGVFPYFCSFHASPDGKIGMTGVAVIGDASYNPQANTAKSKISKKWTGITRKVPSQYKTIQ NAVDAASPGDLVLVAKGIYKEEVTVTTPSITIRGEDRNLTIIDGEFLRGNGIMVVGADGVAVENITTRNATLNGVYWTGV KGYRGSYITAYNNGDYGVYAFDSVDGLIEHSYASGSPDSGFYIGQCNPCNAIIHDVISENNALGYSGTNSSGNIYLLSSI WRKNQLGIGPNTLDRELLPPQKQMVVKKNIVYDNNNTNAPSKKLEYPSIGNGIALLGALENIVEDNLVFNHNNYGILVTM NIDENIWISNNNIVRNNKVYHSGRGDIALSGPVNVGNCFEGNSYGVSSPPFLESLQSCSGIRYPHIGDMSSSIGLLALFV QANLKEFVLGSYKNQPIPSSQLNMPTEAQSKIIPAHDVFDSYKGLIESAELPKLDKKDFETETNKMYTSGWRVHFPGTLK TWYFHIMGFLLPFAIFAAWTGLAILDRFSVKGSKVDLYFWMILLLPFIGSLVYLFSKESKVSPVVRNTVVFGGILLFLTI LAYAGYAMTAVTEPSIT
Sequences:
>Translated_657_residues MENTKKIFLGIFLAMFLTFGLNFCNSEDPANSAFVHVTMMDNAFHPPVIRTYKGGKIRFVNEGNNPHNAISINKDWSTET TYGNLAMFRGAHTDVFFPEEGVFPYFCSFHASPDGKIGMTGVAVIGDASYNPQANTAKSKISKKWTGITRKVPSQYKTIQ NAVDAASPGDLVLVAKGIYKEEVTVTTPSITIRGEDRNLTIIDGEFLRGNGIMVVGADGVAVENITTRNATLNGVYWTGV KGYRGSYITAYNNGDYGVYAFDSVDGLIEHSYASGSPDSGFYIGQCNPCNAIIHDVISENNALGYSGTNSSGNIYLLSSI WRKNQLGIGPNTLDRELLPPQKQMVVKKNIVYDNNNTNAPSKKLEYPSIGNGIALLGALENIVEDNLVFNHNNYGILVTM NIDENIWISNNNIVRNNKVYHSGRGDIALSGPVNVGNCFEGNSYGVSSPPFLESLQSCSGIRYPHIGDMSSSIGLLALFV QANLKEFVLGSYKNQPIPSSQLNMPTEAQSKIIPAHDVFDSYKGLIESAELPKLDKKDFETETNKMYTSGWRVHFPGTLK TWYFHIMGFLLPFAIFAAWTGLAILDRFSVKGSKVDLYFWMILLLPFIGSLVYLFSKESKVSPVVRNTVVFGGILLFLTI LAYAGYAMTAVTEPSIT >Mature_657_residues MENTKKIFLGIFLAMFLTFGLNFCNSEDPANSAFVHVTMMDNAFHPPVIRTYKGGKIRFVNEGNNPHNAISINKDWSTET TYGNLAMFRGAHTDVFFPEEGVFPYFCSFHASPDGKIGMTGVAVIGDASYNPQANTAKSKISKKWTGITRKVPSQYKTIQ NAVDAASPGDLVLVAKGIYKEEVTVTTPSITIRGEDRNLTIIDGEFLRGNGIMVVGADGVAVENITTRNATLNGVYWTGV KGYRGSYITAYNNGDYGVYAFDSVDGLIEHSYASGSPDSGFYIGQCNPCNAIIHDVISENNALGYSGTNSSGNIYLLSSI WRKNQLGIGPNTLDRELLPPQKQMVVKKNIVYDNNNTNAPSKKLEYPSIGNGIALLGALENIVEDNLVFNHNNYGILVTM NIDENIWISNNNIVRNNKVYHSGRGDIALSGPVNVGNCFEGNSYGVSSPPFLESLQSCSGIRYPHIGDMSSSIGLLALFV QANLKEFVLGSYKNQPIPSSQLNMPTEAQSKIIPAHDVFDSYKGLIESAELPKLDKKDFETETNKMYTSGWRVHFPGTLK TWYFHIMGFLLPFAIFAAWTGLAILDRFSVKGSKVDLYFWMILLLPFIGSLVYLFSKESKVSPVVRNTVVFGGILLFLTI LAYAGYAMTAVTEPSIT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72134; Mature: 72134
Theoretical pI: Translated: 6.84; Mature: 6.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENTKKIFLGIFLAMFLTFGLNFCNSEDPANSAFVHVTMMDNAFHPPVIRTYKGGKIRFV CCCHHHHHHHHHHHHHHHHCCHHCCCCCCCCCEEEEEEEECCCCCCCEEEEECCCEEEEE NEGNNPHNAISINKDWSTETTYGNLAMFRGAHTDVFFPEEGVFPYFCSFHASPDGKIGMT ECCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCEECCCCCCCCEEEEEECCCCCCCCEE GVAVIGDASYNPQANTAKSKISKKWTGITRKVPSQYKTIQNAVDAASPGDLVLVAKGIYK EEEEEECCCCCCCCCHHHHHHHHHHCCHHHHCCHHHHHHHHHHCCCCCCCEEEEECCCCC EEVTVTTPSITIRGEDRNLTIIDGEFLRGNGIMVVGADGVAVENITTRNATLNGVYWTGV CEEEEECCEEEEEECCCEEEEECCCEEECCCEEEECCCCEEEEEEEECCCEECCEEEECC KGYRGSYITAYNNGDYGVYAFDSVDGLIEHSYASGSPDSGFYIGQCNPCNAIIHDVISEN CCCCCCEEEEEECCCEEEEEECCCCHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHCCC NALGYSGTNSSGNIYLLSSIWRKNQLGIGPNTLDRELLPPQKQMVVKKNIVYDNNNTNAP CCCCCCCCCCCCCEEEEECHHCCCCCCCCCCCCCCCCCCCHHHHEEEEEEEEECCCCCCC SKKLEYPSIGNGIALLGALENIVEDNLVFNHNNYGILVTMNIDENIWISNNNIVRNNKVY HHCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCEEEEEEEECCCCEEECCCCEEECCCEE HSGRGDIALSGPVNVGNCFEGNSYGVSSPPFLESLQSCSGIRYPHIGDMSSSIGLLALFV ECCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH QANLKEFVLGSYKNQPIPSSQLNMPTEAQSKIIPAHDVFDSYKGLIESAELPKLDKKDFE HHCHHHHHHCCCCCCCCCHHHCCCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHCC TETNKMYTSGWRVHFPGTLKTWYFHIMGFLLPFAIFAAWTGLAILDRFSVKGSKVDLYFW CCCCEEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHH MILLLPFIGSLVYLFSKESKVSPVVRNTVVFGGILLFLTILAYAGYAMTAVTEPSIT HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCC >Mature Secondary Structure MENTKKIFLGIFLAMFLTFGLNFCNSEDPANSAFVHVTMMDNAFHPPVIRTYKGGKIRFV CCCHHHHHHHHHHHHHHHHCCHHCCCCCCCCCEEEEEEEECCCCCCCEEEEECCCEEEEE NEGNNPHNAISINKDWSTETTYGNLAMFRGAHTDVFFPEEGVFPYFCSFHASPDGKIGMT ECCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCEECCCCCCCCEEEEEECCCCCCCCEE GVAVIGDASYNPQANTAKSKISKKWTGITRKVPSQYKTIQNAVDAASPGDLVLVAKGIYK EEEEEECCCCCCCCCHHHHHHHHHHCCHHHHCCHHHHHHHHHHCCCCCCCEEEEECCCCC EEVTVTTPSITIRGEDRNLTIIDGEFLRGNGIMVVGADGVAVENITTRNATLNGVYWTGV CEEEEECCEEEEEECCCEEEEECCCEEECCCEEEECCCCEEEEEEEECCCEECCEEEECC KGYRGSYITAYNNGDYGVYAFDSVDGLIEHSYASGSPDSGFYIGQCNPCNAIIHDVISEN CCCCCCEEEEEECCCEEEEEECCCCHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHCCC NALGYSGTNSSGNIYLLSSIWRKNQLGIGPNTLDRELLPPQKQMVVKKNIVYDNNNTNAP CCCCCCCCCCCCCEEEEECHHCCCCCCCCCCCCCCCCCCCHHHHEEEEEEEEECCCCCCC SKKLEYPSIGNGIALLGALENIVEDNLVFNHNNYGILVTMNIDENIWISNNNIVRNNKVY HHCCCCCCCCCCHHHHHHHHHHHCCCEEEECCCEEEEEEEECCCCEEECCCCEEECCCEE HSGRGDIALSGPVNVGNCFEGNSYGVSSPPFLESLQSCSGIRYPHIGDMSSSIGLLALFV ECCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHH QANLKEFVLGSYKNQPIPSSQLNMPTEAQSKIIPAHDVFDSYKGLIESAELPKLDKKDFE HHCHHHHHHCCCCCCCCCHHHCCCCCHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHCC TETNKMYTSGWRVHFPGTLKTWYFHIMGFLLPFAIFAAWTGLAILDRFSVKGSKVDLYFW CCCCEEEECCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHH MILLLPFIGSLVYLFSKESKVSPVVRNTVVFGGILLFLTILAYAGYAMTAVTEPSIT HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA