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The map label for this gene is 183222373

Identifier: 183222373

GI number: 183222373

Start: 3139300

End: 3139926

Strand: Reverse

Name: 183222373

Synonym: LEPBI_I3027

Alternate gene names: NA

Gene position: 3139926-3139300 (Counterclockwise)

Preceding gene: 183222374

Following gene: 183222372

Centisome position: 87.23

GC content: 34.13

Gene sequence:

>627_bases
ATGAATCACACACTCAATCCTAGGAAAGTACCACAACAAAAACGTTCGAAAGAACGATATCAAAAAATTGTTGATACAGC
AATTATGTTGTTAGGTGAAGTTGGTTATGACGATTTAACGACTGATTTAATCGCGGAAAAAAGTGGAATTTCCGTAGGTT
CGATTTATCAATTTTTTCCTAATAAAGAATCCATTATCTATTCGCATGCGGAAGCTTGTTATCTAATTATGCATGACCTT
TTTTTTGAAAAGGTATCTAAAGCTTTAAAAAAGACAAAAAAATTCACACCTGAATTTGTAGATTTTACATTAATCGCCTA
TGAACAGACATTGAGTGAAGTGAAAGGATATCGATTGATCAATTCAATCTTGTATACGAACGAGGCATTGTTACATTTAG
ATATCGAAAGTAACGAACGTTTTGCGAAATCCTTAGCGGATAAAGTAATTTTGACAATGTTCCCAAAAGTGAATCAGAAA
CGTGCCTTTTATATTGCACTGATGATAGTCGAATCGGTCGATTCGGTCACGAAGATCATCCACAGAACTTCAAAAATCTC
GGAAAAAAAGCAGGTTTTGGCGGAACTTCGAACCTTACTTTTGGTATATTTTTCCAGTTTTCAATGA

Upstream 100 bases:

>100_bases
GATTTGCATTTTTATTTTCCATATCGATAGGAATTCTATTCGGATGGTGGCCTTCGGAATATGCTGCCAAATTGAGTCCT
ATCGTGGCTTTACGATCAGA

Downstream 100 bases:

>100_bases
TTTAACATTGACAAAGTTTTAACACAATTCTAAAATTCTCCAAATGTGAGGTATCCCTCACGTTTCGGGAAAAACTATGG
AAAATACCAAAAAGATATTT

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; TetR-Family Transcriptional Regulator; AcrR Family Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Transcription Regulator Protein

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MNHTLNPRKVPQQKRSKERYQKIVDTAIMLLGEVGYDDLTTDLIAEKSGISVGSIYQFFPNKESIIYSHAEACYLIMHDL
FFEKVSKALKKTKKFTPEFVDFTLIAYEQTLSEVKGYRLINSILYTNEALLHLDIESNERFAKSLADKVILTMFPKVNQK
RAFYIALMIVESVDSVTKIIHRTSKISEKKQVLAELRTLLLVYFSSFQ

Sequences:

>Translated_208_residues
MNHTLNPRKVPQQKRSKERYQKIVDTAIMLLGEVGYDDLTTDLIAEKSGISVGSIYQFFPNKESIIYSHAEACYLIMHDL
FFEKVSKALKKTKKFTPEFVDFTLIAYEQTLSEVKGYRLINSILYTNEALLHLDIESNERFAKSLADKVILTMFPKVNQK
RAFYIALMIVESVDSVTKIIHRTSKISEKKQVLAELRTLLLVYFSSFQ
>Mature_208_residues
MNHTLNPRKVPQQKRSKERYQKIVDTAIMLLGEVGYDDLTTDLIAEKSGISVGSIYQFFPNKESIIYSHAEACYLIMHDL
FFEKVSKALKKTKKFTPEFVDFTLIAYEQTLSEVKGYRLINSILYTNEALLHLDIESNERFAKSLADKVILTMFPKVNQK
RAFYIALMIVESVDSVTKIIHRTSKISEKKQVLAELRTLLLVYFSSFQ

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24044; Mature: 24044

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNHTLNPRKVPQQKRSKERYQKIVDTAIMLLGEVGYDDLTTDLIAEKSGISVGSIYQFFP
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHCC
NKESIIYSHAEACYLIMHDLFFEKVSKALKKTKKFTPEFVDFTLIAYEQTLSEVKGYRLI
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
NSILYTNEALLHLDIESNERFAKSLADKVILTMFPKVNQKRAFYIALMIVESVDSVTKII
HHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
HRTSKISEKKQVLAELRTLLLVYFSSFQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNHTLNPRKVPQQKRSKERYQKIVDTAIMLLGEVGYDDLTTDLIAEKSGISVGSIYQFFP
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHCC
NKESIIYSHAEACYLIMHDLFFEKVSKALKKTKKFTPEFVDFTLIAYEQTLSEVKGYRLI
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
NSILYTNEALLHLDIESNERFAKSLADKVILTMFPKVNQKRAFYIALMIVESVDSVTKII
HHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
HRTSKISEKKQVLAELRTLLLVYFSSFQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA