| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183222310
Identifier: 183222310
GI number: 183222310
Start: 3064229
End: 3065257
Strand: Reverse
Name: 183222310
Synonym: LEPBI_I2962
Alternate gene names: NA
Gene position: 3065257-3064229 (Counterclockwise)
Preceding gene: 183222312
Following gene: 183222309
Centisome position: 85.15
GC content: 40.04
Gene sequence:
>1029_bases ATGTTTCGTCACAATTGTTTTCTCATTTTTTTTGTCCTTCTCCTCTCAAGCGCAAGTTATGCGGAAAAAATATCCATCTT TGGAACCATTCAAAACGGTACAACTAGAGGTATAGGAAAAGCGGACTCGATTCGGATGATGGCCTTACAAGGTGCGATGG TGCCCTTATCGGAAATTGGCCCTCAATCGGGGAAATTTCGGTTTCCCGAAATGGATTTACCAGAGGGTGCTCCCATTCTT TTACAAGTCCAATACCAAGGCGTAAATTATAATAAAATGATCCCGCCAACAACAATGTTTCGTACTTCTCCGCAAGAAAT AACTGTCTATGACACTGGGGCCAATCGCAAACAAGTTTCTATCAAGAGCTTAATGCAAGTTATGCGGGAGAAAAAGGGAC TTCGTGTTTTTAAATTATTCCTCATTGATAATGCAAGTAATCCTCCCAAATCCTATGATTCCAAATCTGGTGGAGCTTTA GAATATTCGGTAGCAAAGGAAGCCACAGAAATCATGGCACAACTCCAACAACCAGGGAGTAAAATGGCAATCCCTCTGGG TGTGCCTGAAGGGCCAAATGGCGGCAAGATCCTTGACCGTGCCATTTTACCAGGAAGTTCTGAATTACAAGTTTCGTATT TGATTCCGAATTCACAACATTCGTTCAGCGAACGAATGTTAATTGAGTCTGAGAATGGTAAATATCCTATTTTTGTCAAA CCACAAGATATGGAAGTGATCACAAATGAAAAAACTCCCGTGGTGAAATTGGACAAAGATGTTCCCAAAGGTCTCAGTGC TTATGTTTTGAATGCACTTGAATTTGGAACAGTGGTGGAGTTTCGCTTTAGAGGTGGAAAGGCCCTTCCTTCTATGGCAA ATTCTCCGAATCCTGAGATTTGGAATGGATCGATTTTAACGAGTTGGGATTTATCTTTATTTGCTGTGATTGGATTTTTA GGACTTTTATTCACACTTTCTTTTATTTTTGTCTATCGCAAACAAACAGAAAGGAAAAACAATTTATGA
Upstream 100 bases:
>100_bases TAAGCATTATGTCCAGTACCTCTCTTGTCGCCTCTAAATTTTTAAAAACTTTCGTTTTTTCACTTGGATTGGAACCGAGA GAACGAGAAAAAGTATCAAA
Downstream 100 bases:
>100_bases ACCAAAACAAATCAAAACAAGAAACCACCTACCTTCGGTTTTTTGGTCTTGCAGAACTTGTGAACCATGGCCCGAGGGGG ATATTAGCCTTTTGGATGAT
Product: putative signal peptide
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MFRHNCFLIFFVLLLSSASYAEKISIFGTIQNGTTRGIGKADSIRMMALQGAMVPLSEIGPQSGKFRFPEMDLPEGAPIL LQVQYQGVNYNKMIPPTTMFRTSPQEITVYDTGANRKQVSIKSLMQVMREKKGLRVFKLFLIDNASNPPKSYDSKSGGAL EYSVAKEATEIMAQLQQPGSKMAIPLGVPEGPNGGKILDRAILPGSSELQVSYLIPNSQHSFSERMLIESENGKYPIFVK PQDMEVITNEKTPVVKLDKDVPKGLSAYVLNALEFGTVVEFRFRGGKALPSMANSPNPEIWNGSILTSWDLSLFAVIGFL GLLFTLSFIFVYRKQTERKNNL
Sequences:
>Translated_342_residues MFRHNCFLIFFVLLLSSASYAEKISIFGTIQNGTTRGIGKADSIRMMALQGAMVPLSEIGPQSGKFRFPEMDLPEGAPIL LQVQYQGVNYNKMIPPTTMFRTSPQEITVYDTGANRKQVSIKSLMQVMREKKGLRVFKLFLIDNASNPPKSYDSKSGGAL EYSVAKEATEIMAQLQQPGSKMAIPLGVPEGPNGGKILDRAILPGSSELQVSYLIPNSQHSFSERMLIESENGKYPIFVK PQDMEVITNEKTPVVKLDKDVPKGLSAYVLNALEFGTVVEFRFRGGKALPSMANSPNPEIWNGSILTSWDLSLFAVIGFL GLLFTLSFIFVYRKQTERKNNL >Mature_342_residues MFRHNCFLIFFVLLLSSASYAEKISIFGTIQNGTTRGIGKADSIRMMALQGAMVPLSEIGPQSGKFRFPEMDLPEGAPIL LQVQYQGVNYNKMIPPTTMFRTSPQEITVYDTGANRKQVSIKSLMQVMREKKGLRVFKLFLIDNASNPPKSYDSKSGGAL EYSVAKEATEIMAQLQQPGSKMAIPLGVPEGPNGGKILDRAILPGSSELQVSYLIPNSQHSFSERMLIESENGKYPIFVK PQDMEVITNEKTPVVKLDKDVPKGLSAYVLNALEFGTVVEFRFRGGKALPSMANSPNPEIWNGSILTSWDLSLFAVIGFL GLLFTLSFIFVYRKQTERKNNL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37937; Mature: 37937
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: PS00061 ADH_SHORT
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRHNCFLIFFVLLLSSASYAEKISIFGTIQNGTTRGIGKADSIRMMALQGAMVPLSEIG CCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCHHHCC PQSGKFRFPEMDLPEGAPILLQVQYQGVNYNKMIPPTTMFRTSPQEITVYDTGANRKQVS CCCCCEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEECCCCEEEEEECCCCCCEEH IKSLMQVMREKKGLRVFKLFLIDNASNPPKSYDSKSGGALEYSVAKEATEIMAQLQQPGS HHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCC KMAIPLGVPEGPNGGKILDRAILPGSSELQVSYLIPNSQHSFSERMLIESENGKYPIFVK CEEEEECCCCCCCCCCEEHHEECCCCCCEEEEEECCCCCCCCCCEEEEECCCCCEEEEEC PQDMEVITNEKTPVVKLDKDVPKGLSAYVLNALEFGTVVEFRFRGGKALPSMANSPNPEI CCCCEEEECCCCCEEEECCCCCCCHHHHHHHHHHHCEEEEEEECCCCCCCCCCCCCCCCE WNGSILTSWDLSLFAVIGFLGLLFTLSFIFVYRKQTERKNNL ECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MFRHNCFLIFFVLLLSSASYAEKISIFGTIQNGTTRGIGKADSIRMMALQGAMVPLSEIG CCCCHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEECCCCCCHHHCC PQSGKFRFPEMDLPEGAPILLQVQYQGVNYNKMIPPTTMFRTSPQEITVYDTGANRKQVS CCCCCEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEECCCCEEEEEECCCCCCEEH IKSLMQVMREKKGLRVFKLFLIDNASNPPKSYDSKSGGALEYSVAKEATEIMAQLQQPGS HHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHCCCC KMAIPLGVPEGPNGGKILDRAILPGSSELQVSYLIPNSQHSFSERMLIESENGKYPIFVK CEEEEECCCCCCCCCCEEHHEECCCCCCEEEEEECCCCCCCCCCEEEEECCCCCEEEEEC PQDMEVITNEKTPVVKLDKDVPKGLSAYVLNALEFGTVVEFRFRGGKALPSMANSPNPEI CCCCEEEECCCCCEEEECCCCCCCHHHHHHHHHHHCEEEEEEECCCCCCCCCCCCCCCCE WNGSILTSWDLSLFAVIGFLGLLFTLSFIFVYRKQTERKNNL ECCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA