| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183222309
Identifier: 183222309
GI number: 183222309
Start: 3062874
End: 3064232
Strand: Reverse
Name: 183222309
Synonym: LEPBI_I2961
Alternate gene names: NA
Gene position: 3064232-3062874 (Counterclockwise)
Preceding gene: 183222310
Following gene: 183222308
Centisome position: 85.13
GC content: 39.07
Gene sequence:
>1359_bases ATGAACCAAAACAAATCAAAACAAGAAACCACCTACCTTCGGTTTTTTGGTCTTGCAGAACTTGTGAACCATGGCCCGAG GGGGATATTAGCCTTTTGGATGATTATGGGGATGGCATTCTTTTTGTTTGGCGATCAAAACTTGATAGCACCCAATATGA AAAATATTGGAGCTTCCTTAGGTATCACCGATCCAAACGAAGTGGATTGGAAGTTTGGTGGGATCATTCCTGTTTTGTTT TTTATTTTAGGTGGATTTGTATCCCTTTCAATGGGTTACCTTTCCCAAGCATTTTCTCGCAAAAATTTACTTGTCGCTAC AGTACTATTAGGCGAGATTCCTTGTTTTTTGACAGCGTATGCGGAAACTTATGATCAGTTTTTGATCCTAAGAACCCTAT GTGGTTTTGGACTTGGTGGGATTTTTCCACTTCTTTTTAGTTTGATTGGAGATTATTTTTCAAGCCAATCTAGAGCGATT GCCACTGGTTATGTGTCACTTGCAATGGGACTTGGTGTTGGGGTAGGTCAGTTACTCGGTGGGATTTTGGGTGGCGCTGA TCCGATCAACGGTTGGAGAGCATCATTTATTTATATGTCTGCCCCTTCTTTTTTCTTTGCCGCTGTGTATTTATTATTTT GTAAAGAACCAAAACGTGGTGGTGCCGAAGAAGTGGGAGTGGATGAACTTTCACATAAAATCACACTCAAAGACTTCCGA TTGTTATTTCATAACAAAACCAATCTCGGAGCTTTTTTACAAGGCCTTCCTGGTTGTATTCCTTGGGGAGTATTTTTTGT TTATTTAGCCGATTATTACGAACATACTTATCACTTATCCAAAGAAGTTTCAGCAGGAATGATTACCTTTGCAGCTATTG GAATTTTTATAGGAACTTTTTTTGGTGGGGTAATTGGTCAAATTTTATACAATATGAAAAAAACGTACCAACCACTACTG TGTATGGGTACAACATTTTTTGGAGTGTTCCCTGCAGTTCTCTTATTGTATTCGTTTGACATTGTTCCCTATATGGGGCT TTTTATTGCACTCAACATCTTCACTGGGATTATGATTTCTGTCACTGGACCGAATGTAAGGGCAGTACTTCTCAATGTGA ATGAACCAAAATCTAGAAGTGCTATCTTTTCGATTTACAACCTAACAGATGATTTAGGAAAAGGACTTGGGCCTGTCATG TCAGCTGTCATACTTGGACTCACGCCTGATCGTGGACTTGCTCTTTCGATCTCCATTCTTTTTTGGATTCCCTGTGCCCT AGCATGGTTTTTGGTATTGTTCAATTATGAAAAAGATGAAGCAAACATGCATTTGATGATGAAACAGAATGTTTCCTAG
Upstream 100 bases:
>100_bases GGGATTTATCTTTATTTGCTGTGATTGGATTTTTAGGACTTTTATTCACACTTTCTTTTATTTTTGTCTATCGCAAACAA ACAGAAAGGAAAAACAATTT
Downstream 100 bases:
>100_bases GTTATCTTTTTGTCCTAAATAATTCAACGGTAACACAATAGATTCAATGCAGATCAAACACAATTTACTTGATATTGAAG GGACAACGGCACCAATCGCC
Product: major facilitator transporter
Products: NA
Alternate protein names: 4-Hydroxybenzoate Transporter Transmembrane Protein; 4-Hydroxybenzoate Transporter; Facilitator Superfamily Permease
Number of amino acids: Translated: 452; Mature: 452
Protein sequence:
>452_residues MNQNKSKQETTYLRFFGLAELVNHGPRGILAFWMIMGMAFFLFGDQNLIAPNMKNIGASLGITDPNEVDWKFGGIIPVLF FILGGFVSLSMGYLSQAFSRKNLLVATVLLGEIPCFLTAYAETYDQFLILRTLCGFGLGGIFPLLFSLIGDYFSSQSRAI ATGYVSLAMGLGVGVGQLLGGILGGADPINGWRASFIYMSAPSFFFAAVYLLFCKEPKRGGAEEVGVDELSHKITLKDFR LLFHNKTNLGAFLQGLPGCIPWGVFFVYLADYYEHTYHLSKEVSAGMITFAAIGIFIGTFFGGVIGQILYNMKKTYQPLL CMGTTFFGVFPAVLLLYSFDIVPYMGLFIALNIFTGIMISVTGPNVRAVLLNVNEPKSRSAIFSIYNLTDDLGKGLGPVM SAVILGLTPDRGLALSISILFWIPCALAWFLVLFNYEKDEANMHLMMKQNVS
Sequences:
>Translated_452_residues MNQNKSKQETTYLRFFGLAELVNHGPRGILAFWMIMGMAFFLFGDQNLIAPNMKNIGASLGITDPNEVDWKFGGIIPVLF FILGGFVSLSMGYLSQAFSRKNLLVATVLLGEIPCFLTAYAETYDQFLILRTLCGFGLGGIFPLLFSLIGDYFSSQSRAI ATGYVSLAMGLGVGVGQLLGGILGGADPINGWRASFIYMSAPSFFFAAVYLLFCKEPKRGGAEEVGVDELSHKITLKDFR LLFHNKTNLGAFLQGLPGCIPWGVFFVYLADYYEHTYHLSKEVSAGMITFAAIGIFIGTFFGGVIGQILYNMKKTYQPLL CMGTTFFGVFPAVLLLYSFDIVPYMGLFIALNIFTGIMISVTGPNVRAVLLNVNEPKSRSAIFSIYNLTDDLGKGLGPVM SAVILGLTPDRGLALSISILFWIPCALAWFLVLFNYEKDEANMHLMMKQNVS >Mature_452_residues MNQNKSKQETTYLRFFGLAELVNHGPRGILAFWMIMGMAFFLFGDQNLIAPNMKNIGASLGITDPNEVDWKFGGIIPVLF FILGGFVSLSMGYLSQAFSRKNLLVATVLLGEIPCFLTAYAETYDQFLILRTLCGFGLGGIFPLLFSLIGDYFSSQSRAI ATGYVSLAMGLGVGVGQLLGGILGGADPINGWRASFIYMSAPSFFFAAVYLLFCKEPKRGGAEEVGVDELSHKITLKDFR LLFHNKTNLGAFLQGLPGCIPWGVFFVYLADYYEHTYHLSKEVSAGMITFAAIGIFIGTFFGGVIGQILYNMKKTYQPLL CMGTTFFGVFPAVLLLYSFDIVPYMGLFIALNIFTGIMISVTGPNVRAVLLNVNEPKSRSAIFSIYNLTDDLGKGLGPVM SAVILGLTPDRGLALSISILFWIPCALAWFLVLFNYEKDEANMHLMMKQNVS
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49642; Mature: 49642
Theoretical pI: Translated: 7.45; Mature: 7.45
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQNKSKQETTYLRFFGLAELVNHGPRGILAFWMIMGMAFFLFGDQNLIAPNMKNIGASL CCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCC GITDPNEVDWKFGGIIPVLFFILGGFVSLSMGYLSQAFSRKNLLVATVLLGEIPCFLTAY CCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH AETYDQFLILRTLCGFGLGGIFPLLFSLIGDYFSSQSRAIATGYVSLAMGLGVGVGQLLG HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHH GILGGADPINGWRASFIYMSAPSFFFAAVYLLFCKEPKRGGAEEVGVDELSHKITLKDFR HHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH LLFHNKTNLGAFLQGLPGCIPWGVFFVYLADYYEHTYHLSKEVSAGMITFAAIGIFIGTF HHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGGVIGQILYNMKKTYQPLLCMGTTFFGVFPAVLLLYSFDIVPYMGLFIALNIFTGIMIS HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEE VTGPNVRAVLLNVNEPKSRSAIFSIYNLTDDLGKGLGPVMSAVILGLTPDRGLALSISIL EECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEHHHHH FWIPCALAWFLVLFNYEKDEANMHLMMKQNVS HHHHHHHHHHHHHHCCCCCCCCEEEEEECCCC >Mature Secondary Structure MNQNKSKQETTYLRFFGLAELVNHGPRGILAFWMIMGMAFFLFGDQNLIAPNMKNIGASL CCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCC GITDPNEVDWKFGGIIPVLFFILGGFVSLSMGYLSQAFSRKNLLVATVLLGEIPCFLTAY CCCCCCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH AETYDQFLILRTLCGFGLGGIFPLLFSLIGDYFSSQSRAIATGYVSLAMGLGVGVGQLLG HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHH GILGGADPINGWRASFIYMSAPSFFFAAVYLLFCKEPKRGGAEEVGVDELSHKITLKDFR HHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH LLFHNKTNLGAFLQGLPGCIPWGVFFVYLADYYEHTYHLSKEVSAGMITFAAIGIFIGTF HHHCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FGGVIGQILYNMKKTYQPLLCMGTTFFGVFPAVLLLYSFDIVPYMGLFIALNIFTGIMIS HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEE VTGPNVRAVLLNVNEPKSRSAIFSIYNLTDDLGKGLGPVMSAVILGLTPDRGLALSISIL EECCCEEEEEEECCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCEEHHHHH FWIPCALAWFLVLFNYEKDEANMHLMMKQNVS HHHHHHHHHHHHHHCCCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA