| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is cya [H]
Identifier: 183222293
GI number: 183222293
Start: 3046096
End: 3047955
Strand: Reverse
Name: cya [H]
Synonym: LEPBI_I2945
Alternate gene names: 183222293
Gene position: 3047955-3046096 (Counterclockwise)
Preceding gene: 183222300
Following gene: 183222292
Centisome position: 84.67
GC content: 37.47
Gene sequence:
>1860_bases GTGGATGGGAAGGGATATGGGACTTATGTTTTGGATATTTTGCTTCCGAGTGAGTCGCAGATTTATTCATTGTATTTACC CGAAGTTCGGACTAACTTCCGAGTAACCGCCGCTAATCGTACGTTACTTTCTGGATTGCCTGGGAAGGATAAAAAATCAA CAATCCCGAGCGCACAAGGTCAAAGTTTTACATTTCATGCCAAAGACAATATTCAAATCAAAATTGAAGTGAGTAATTTC CATCATAAAGAAGGTGGATTACCCAATGCTCCTATATTTGGAACAGCAGAAACGGTTCAAAATTATATTTTGGCAGAGAG TACGATGGACATTGCACTCACTGGTGCTCTGTTTATGTTTGGATTGTATCATTTTATTTTATTTTTTTATCGTAACAAAC AAAGGGAGGCATTCTATTTTGGATTCTTTTGTTTGGTATTTGCAATCCGACTACCATTTGTGGGAAGTAAAACGATTTAT GCCATGTTTCCTAATATCCCTTGGGAACTTGTGATATATGTTGAATATGCATCTGTTTTTGTTTTAGGTATTTTGTTTTT ATGGTTTGTGGATGGTTTATTCCCTCGATTCATTGAAACAAGAATCATTCGATACTTTAGTGCCTTTGTTCAATTCGTTT TGGTTTACGGACTCATTATCAAACCAGAATTTTATACCGAATTTGAAGTCGTATTTCAAGTGTTAGGTGTTGTTTATGCT GTCTTTTTGGGGATTCGACTTTACCAAATGGTAGTGAAAGGATTACCAGATTCACATATATTCTTTTTAGGGTATTTGAT TTTGTTTTTTGGGTTTGTATATGATGTATTTCTTGCTTACACTGGAGAAGGGGAATCATCCTTATCACAAATCGCTGTCT TTCTGTTTTTTGGAGTTCAATCCACGATTGTGACACTTCGTACGGCTAGAACCTTTCATAAAAAGGTCCTTTTAAAAGAA GAGTTTGAAACCATCAATGAACAATTTATCCTGACAAATCGTTTTTACGCAAAATTCATTCCTCGAGATTTTTTAACTCA TTTGGGTAAAGAAAGTATCGAGGAAGTAAAGTTAGGTGACAGTAGCGAAAGAGAGATGACCGTTTTATTTGCGGACATTT GGGAATATTGGGATATCATCTATTCCATTCCACTTGAAAATCGTATTCTATTTACGAACTCATATTTAGGTCGAATTGGG CCTTGTGTCCGAAAGAACAATGGATTTATCGATAAATACATTGGAAGTGCTGTGATGGCTCTTTTTGATGGTGGAATTCA AAATTCGATCAAAGCAGCAGAAGACATCCAGTGGGAATTGGAAACATACAACGAAAGGCGAAGAGGATTCGGATATTTAC CCTTACATGCAGGTATTGGAATCCATTCCGGGGATACGATGCTCGGAATTTTAGGTGAAGAAGAAAGGCTCGAGTCCACT GTCATATCGGATACTGTGAATTTAGCAAGTCGCATCCAAGGATTGACCAAAAAGTACAATGCTAGAATCCTTGTTAGTTT AACCTCTTTGATGTTACACGAAGATTTGGATACCATTCCTTATCGGATTTTAGATTTTGTGCGAGTCAAAGGCAAACAGG AAACAGTGATGATCGCGGAAGTATTAATTCCTGGCATTGATTCCATTTCCGATCAAAAAATTGCATACCGTGAACAATTT GAAGCCGCCATCTTTGATTACGAACGAGCCGATTTTGTTTCTGCATTGAATGGATTTCGAGAAGTACATACAAACAATCC CGAAGACATTGCTGCACAAATCTATATTGAAAGGTGTGAATACTACCAAACTGCCGGCGTTGGCGAAGATTGGGATGGGG TTTCTGCATGGGAAAAATAA
Upstream 100 bases:
>100_bases ATTTTATCCTCATACTTTGGGAGAAATACCACCTGACGCGAGTCATTCGCTACTTCCAGTTCCATCTCTTTGGAATGAAG TTCCCCTCAGGTCAGGGATC
Downstream 100 bases:
>100_bases AACCAATCCTAAATCATTTGATATTAGTAAACTTTCTTTTCTTTTGTTTGGCGTTAGTTTCGTGTAACTTTGATAATACG AAAGTTGCAAAAAAAGGATA
Product: adenylate cyclase family protein
Products: NA
Alternate protein names: ATP pyrophosphate-lyase; Adenylyl cyclase [H]
Number of amino acids: Translated: 619; Mature: 619
Protein sequence:
>619_residues MDGKGYGTYVLDILLPSESQIYSLYLPEVRTNFRVTAANRTLLSGLPGKDKKSTIPSAQGQSFTFHAKDNIQIKIEVSNF HHKEGGLPNAPIFGTAETVQNYILAESTMDIALTGALFMFGLYHFILFFYRNKQREAFYFGFFCLVFAIRLPFVGSKTIY AMFPNIPWELVIYVEYASVFVLGILFLWFVDGLFPRFIETRIIRYFSAFVQFVLVYGLIIKPEFYTEFEVVFQVLGVVYA VFLGIRLYQMVVKGLPDSHIFFLGYLILFFGFVYDVFLAYTGEGESSLSQIAVFLFFGVQSTIVTLRTARTFHKKVLLKE EFETINEQFILTNRFYAKFIPRDFLTHLGKESIEEVKLGDSSEREMTVLFADIWEYWDIIYSIPLENRILFTNSYLGRIG PCVRKNNGFIDKYIGSAVMALFDGGIQNSIKAAEDIQWELETYNERRRGFGYLPLHAGIGIHSGDTMLGILGEEERLEST VISDTVNLASRIQGLTKKYNARILVSLTSLMLHEDLDTIPYRILDFVRVKGKQETVMIAEVLIPGIDSISDQKIAYREQF EAAIFDYERADFVSALNGFREVHTNNPEDIAAQIYIERCEYYQTAGVGEDWDGVSAWEK
Sequences:
>Translated_619_residues MDGKGYGTYVLDILLPSESQIYSLYLPEVRTNFRVTAANRTLLSGLPGKDKKSTIPSAQGQSFTFHAKDNIQIKIEVSNF HHKEGGLPNAPIFGTAETVQNYILAESTMDIALTGALFMFGLYHFILFFYRNKQREAFYFGFFCLVFAIRLPFVGSKTIY AMFPNIPWELVIYVEYASVFVLGILFLWFVDGLFPRFIETRIIRYFSAFVQFVLVYGLIIKPEFYTEFEVVFQVLGVVYA VFLGIRLYQMVVKGLPDSHIFFLGYLILFFGFVYDVFLAYTGEGESSLSQIAVFLFFGVQSTIVTLRTARTFHKKVLLKE EFETINEQFILTNRFYAKFIPRDFLTHLGKESIEEVKLGDSSEREMTVLFADIWEYWDIIYSIPLENRILFTNSYLGRIG PCVRKNNGFIDKYIGSAVMALFDGGIQNSIKAAEDIQWELETYNERRRGFGYLPLHAGIGIHSGDTMLGILGEEERLEST VISDTVNLASRIQGLTKKYNARILVSLTSLMLHEDLDTIPYRILDFVRVKGKQETVMIAEVLIPGIDSISDQKIAYREQF EAAIFDYERADFVSALNGFREVHTNNPEDIAAQIYIERCEYYQTAGVGEDWDGVSAWEK >Mature_619_residues MDGKGYGTYVLDILLPSESQIYSLYLPEVRTNFRVTAANRTLLSGLPGKDKKSTIPSAQGQSFTFHAKDNIQIKIEVSNF HHKEGGLPNAPIFGTAETVQNYILAESTMDIALTGALFMFGLYHFILFFYRNKQREAFYFGFFCLVFAIRLPFVGSKTIY AMFPNIPWELVIYVEYASVFVLGILFLWFVDGLFPRFIETRIIRYFSAFVQFVLVYGLIIKPEFYTEFEVVFQVLGVVYA VFLGIRLYQMVVKGLPDSHIFFLGYLILFFGFVYDVFLAYTGEGESSLSQIAVFLFFGVQSTIVTLRTARTFHKKVLLKE EFETINEQFILTNRFYAKFIPRDFLTHLGKESIEEVKLGDSSEREMTVLFADIWEYWDIIYSIPLENRILFTNSYLGRIG PCVRKNNGFIDKYIGSAVMALFDGGIQNSIKAAEDIQWELETYNERRRGFGYLPLHAGIGIHSGDTMLGILGEEERLEST VISDTVNLASRIQGLTKKYNARILVSLTSLMLHEDLDTIPYRILDFVRVKGKQETVMIAEVLIPGIDSISDQKIAYREQF EAAIFDYERADFVSALNGFREVHTNNPEDIAAQIYIERCEYYQTAGVGEDWDGVSAWEK
Specific function: May function as a membrane-localized receptor protein [H]
COG id: COG2114
COG function: function code T; Adenylate cyclase, family 3 (some proteins contain HAMP domain)
Gene ontology:
Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HAMP domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001054 - InterPro: IPR003660 [H]
Pfam domain/function: PF00211 Guanylate_cyc; PF00672 HAMP [H]
EC number: =4.6.1.1 [H]
Molecular weight: Translated: 70920; Mature: 70920
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: PS50125 GUANYLATE_CYCLASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDGKGYGTYVLDILLPSESQIYSLYLPEVRTNFRVTAANRTLLSGLPGKDKKSTIPSAQG CCCCCCEEEEEEEEECCCCCEEEEECCCCCCCEEEEECCCHHHCCCCCCCCCCCCCCCCC QSFTFHAKDNIQIKIEVSNFHHKEGGLPNAPIFGTAETVQNYILAESTMDIALTGALFMF CEEEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHH GLYHFILFFYRNKQREAFYFGFFCLVFAIRLPFVGSKTIYAMFPNIPWELVIYVEYASVF HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEEEHHHHHH VLGILFLWFVDGLFPRFIETRIIRYFSAFVQFVLVYGLIIKPEFYTEFEVVFQVLGVVYA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH VFLGIRLYQMVVKGLPDSHIFFLGYLILFFGFVYDVFLAYTGEGESSLSQIAVFLFFGVQ HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH STIVTLRTARTFHKKVLLKEEFETINEQFILTNRFYAKFIPRDFLTHLGKESIEEVKLGD HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHCCHHHHHHCCHHHHHHHCCCC SSEREMTVLFADIWEYWDIIYSIPLENRILFTNSYLGRIGPCVRKNNGFIDKYIGSAVMA CCCCEEEEHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHCCHHCCCCCCHHHHHHHHHHH LFDGGIQNSIKAAEDIQWELETYNERRRGFGYLPLHAGIGIHSGDTMLGILGEEERLEST HHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEECCCHHHHHHH VISDTVNLASRIQGLTKKYNARILVSLTSLMLHEDLDTIPYRILDFVRVKGKQETVMIAE HHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCEEHHH VLIPGIDSISDQKIAYREQFEAAIFDYERADFVSALNGFREVHTNNPEDIAAQIYIERCE HHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH YYQTAGVGEDWDGVSAWEK HHHHCCCCCCCCCCCCCCC >Mature Secondary Structure MDGKGYGTYVLDILLPSESQIYSLYLPEVRTNFRVTAANRTLLSGLPGKDKKSTIPSAQG CCCCCCEEEEEEEEECCCCCEEEEECCCCCCCEEEEECCCHHHCCCCCCCCCCCCCCCCC QSFTFHAKDNIQIKIEVSNFHHKEGGLPNAPIFGTAETVQNYILAESTMDIALTGALFMF CEEEEEECCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHH GLYHFILFFYRNKQREAFYFGFFCLVFAIRLPFVGSKTIYAMFPNIPWELVIYVEYASVF HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEEEEHHHHHH VLGILFLWFVDGLFPRFIETRIIRYFSAFVQFVLVYGLIIKPEFYTEFEVVFQVLGVVYA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH VFLGIRLYQMVVKGLPDSHIFFLGYLILFFGFVYDVFLAYTGEGESSLSQIAVFLFFGVQ HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH STIVTLRTARTFHKKVLLKEEFETINEQFILTNRFYAKFIPRDFLTHLGKESIEEVKLGD HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHCCHHHHHHCCHHHHHHHCCCC SSEREMTVLFADIWEYWDIIYSIPLENRILFTNSYLGRIGPCVRKNNGFIDKYIGSAVMA CCCCEEEEHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHCCHHCCCCCCHHHHHHHHHHH LFDGGIQNSIKAAEDIQWELETYNERRRGFGYLPLHAGIGIHSGDTMLGILGEEERLEST HHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEECCCHHHHHHH VISDTVNLASRIQGLTKKYNARILVSLTSLMLHEDLDTIPYRILDFVRVKGKQETVMIAE HHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHCHHHHHHHHHHHHHCCCCCCCEEHHH VLIPGIDSISDQKIAYREQFEAAIFDYERADFVSALNGFREVHTNNPEDIAAQIYIERCE HHHCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH YYQTAGVGEDWDGVSAWEK HHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7601856 [H]