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The map label for this gene is ydeN [H]

Identifier: 183222258

GI number: 183222258

Start: 3008234

End: 3010099

Strand: Reverse

Name: ydeN [H]

Synonym: LEPBI_I2909

Alternate gene names: 183222258

Gene position: 3010099-3008234 (Counterclockwise)

Preceding gene: 183222259

Following gene: 183222256

Centisome position: 83.62

GC content: 38.16

Gene sequence:

>1866_bases
TTGAAAGAATTCCCTTCTTTTTCAATTAAAAACTTTTTATTTCGAAGTTCACTTTCTTTTCATACGATATTTATTATCAT
CGTTTTTGTTTTCCTTCCTTTTTGCCAAAAAGAAAGTTCTGTTTCTGAAAATGGTTTAGAGTTCAGTGGAGAAGGGAATG
GAATCAAAAATGCTAAAGAAACATCCTCCAAACCGAATGTGATTTGGATCGTGATCGATTCCCTTCGAGGGGATATCATT
GGACGCTATAATGTCACACCTAACTTAGATTTGTTTGCAAAAGAGGGGGTTCAGTTTGATTACCATTTGGTAAATGCTGC
ATGGACCAGGCCTTCTACACTTGTGTTTTTTACAGGAAAGTATGCTTCCGCCAATCCTGTTAATTTTTGGGACTATCCCA
CAACAAAATCAGAGACAGAGGCATTCTATCGTTCTGAGAAAAAACCACTTCCAAAACTTTTAAAATCTTCCCATTACACT
ACTTATATGGTAGGAAACAATCCGTTTTTGACCGATAGGTTCGGACTTGGGGTGGATGTCGGATTTGATTTTTTATATGA
TTTTTCGAATTACGGCGAAGATACAAAGAAGATCACAAACAAAACAATGGAAGTGATCGAAGAAGTTGTATCGAAAAATA
ATCCTTTTTTTTTATTTCTCAATTATAACGACCCGCACAAACCTTATACACCACCTCCTGGATTTACGAGCCGCATTTTA
ACCAAAGAAGTGTTAGATGAGCGTAAATTGAATTATTTAGGAGAGGTGGCATTTGTTGACGAAGAATTGGGAAAGGTCTT
TGAAGCCATCAAAACAAAAGGACTTTGGGAGAATTCACTCATCCTCATCACAGCCGATCATGGGGAAGTGATGCATGCCT
CCCATGCAATTTCTCCTTTTACAGGAACCAATACCTTTTATGGGCATGGACAAGATTTGTTTTTGGAAAACATCCATGTG
CCACTCCTCATCAAATTACCAAATTCCAGTTTTAAAAAAGCCGTTCCGTCTATGACTCGTTCCATTGATTTGTATCCAAC
GGTTCTTGATTATATTGGCATTCCGATTCCAAAAAACATCCATGGGTTATCATTGCGTCCCATCATAGAAGGGAAAGAGA
CCACCAAACGAACCTACTACGGAGAGACTCGGTTTACACAAGGGTATGGCGAAGGAAACGAGTTTTTACTACAAAGGTCT
TACCGATTTCATGAATTGGGAAAATTTTGGCAAGGATCTGTGGGAAATGAGTTTTATTTGTATTTTGATACAAATTCTGA
TCCAAATCAAATTTCCCCAATCCGAATCAACCAAATCCAATCGATCGCAGAGTTAAAGTTAAATGGTAATTTGGAAAAAA
AGATCCAGAGGTTTTGGAAACAGATTCGTTCCATGGAACCAAAACTTCCCTTATACCATCTTTGGGTGCATCCAAGTCCG
TTAGAAAAAGATACGGAAATCCAAATCACAGTACCGAGTGGGACATTACGAATGGCAAATCTTCCATCCAATGTTTTAAT
AGAGGAGAAAGGTCGGTTGATCAAACTCCGTACACAAGACCAAACTCCATTCCAAATCAGTTTTGAAGTGTATCCAGATG
TGAGTTTTCCTGAATTTAAAGTTTGGTTTGGGAAAAACCAAGTTCCCAAATCGGAAATTCACGTAGGGTATTTTGGAGTG
AACCTTTCTGCTTGTTCGAAAGACTGTGATCTGTTATACGAATCACAATCCTTTCGGCCCATCATCCACCCACAAACAAA
GGTTCATTTCTGGAAAGAGGGGGGGCTTAAAAAAACCTATGAAAACAAACAAGAGTTAGGAACGGATGCCTTGGATATAT
TAAAAAAACAAGGTTATGTGCAATGA

Upstream 100 bases:

>100_bases
TGTTTTTTAAAGAACGTTTGAATTTTACACAATGGCTTGGGATCTCGTTTATCCTGGTAGGTGTATGGCTTACCGCCTTG
CAGATGTTTGACGTTAACTC

Downstream 100 bases:

>100_bases
CACAATCAGTGTGACAATCTGCACGAGTTTTTTGGCTTCGGCAGGTACGGTATCGAAATTAGGCTCACTTCCAATTCCAG
GTAATTTCGAAACGATTTCT

Product: putative arylsulfatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 621; Mature: 621

Protein sequence:

>621_residues
MKEFPSFSIKNFLFRSSLSFHTIFIIIVFVFLPFCQKESSVSENGLEFSGEGNGIKNAKETSSKPNVIWIVIDSLRGDII
GRYNVTPNLDLFAKEGVQFDYHLVNAAWTRPSTLVFFTGKYASANPVNFWDYPTTKSETEAFYRSEKKPLPKLLKSSHYT
TYMVGNNPFLTDRFGLGVDVGFDFLYDFSNYGEDTKKITNKTMEVIEEVVSKNNPFFLFLNYNDPHKPYTPPPGFTSRIL
TKEVLDERKLNYLGEVAFVDEELGKVFEAIKTKGLWENSLILITADHGEVMHASHAISPFTGTNTFYGHGQDLFLENIHV
PLLIKLPNSSFKKAVPSMTRSIDLYPTVLDYIGIPIPKNIHGLSLRPIIEGKETTKRTYYGETRFTQGYGEGNEFLLQRS
YRFHELGKFWQGSVGNEFYLYFDTNSDPNQISPIRINQIQSIAELKLNGNLEKKIQRFWKQIRSMEPKLPLYHLWVHPSP
LEKDTEIQITVPSGTLRMANLPSNVLIEEKGRLIKLRTQDQTPFQISFEVYPDVSFPEFKVWFGKNQVPKSEIHVGYFGV
NLSACSKDCDLLYESQSFRPIIHPQTKVHFWKEGGLKKTYENKQELGTDALDILKKQGYVQ

Sequences:

>Translated_621_residues
MKEFPSFSIKNFLFRSSLSFHTIFIIIVFVFLPFCQKESSVSENGLEFSGEGNGIKNAKETSSKPNVIWIVIDSLRGDII
GRYNVTPNLDLFAKEGVQFDYHLVNAAWTRPSTLVFFTGKYASANPVNFWDYPTTKSETEAFYRSEKKPLPKLLKSSHYT
TYMVGNNPFLTDRFGLGVDVGFDFLYDFSNYGEDTKKITNKTMEVIEEVVSKNNPFFLFLNYNDPHKPYTPPPGFTSRIL
TKEVLDERKLNYLGEVAFVDEELGKVFEAIKTKGLWENSLILITADHGEVMHASHAISPFTGTNTFYGHGQDLFLENIHV
PLLIKLPNSSFKKAVPSMTRSIDLYPTVLDYIGIPIPKNIHGLSLRPIIEGKETTKRTYYGETRFTQGYGEGNEFLLQRS
YRFHELGKFWQGSVGNEFYLYFDTNSDPNQISPIRINQIQSIAELKLNGNLEKKIQRFWKQIRSMEPKLPLYHLWVHPSP
LEKDTEIQITVPSGTLRMANLPSNVLIEEKGRLIKLRTQDQTPFQISFEVYPDVSFPEFKVWFGKNQVPKSEIHVGYFGV
NLSACSKDCDLLYESQSFRPIIHPQTKVHFWKEGGLKKTYENKQELGTDALDILKKQGYVQ
>Mature_621_residues
MKEFPSFSIKNFLFRSSLSFHTIFIIIVFVFLPFCQKESSVSENGLEFSGEGNGIKNAKETSSKPNVIWIVIDSLRGDII
GRYNVTPNLDLFAKEGVQFDYHLVNAAWTRPSTLVFFTGKYASANPVNFWDYPTTKSETEAFYRSEKKPLPKLLKSSHYT
TYMVGNNPFLTDRFGLGVDVGFDFLYDFSNYGEDTKKITNKTMEVIEEVVSKNNPFFLFLNYNDPHKPYTPPPGFTSRIL
TKEVLDERKLNYLGEVAFVDEELGKVFEAIKTKGLWENSLILITADHGEVMHASHAISPFTGTNTFYGHGQDLFLENIHV
PLLIKLPNSSFKKAVPSMTRSIDLYPTVLDYIGIPIPKNIHGLSLRPIIEGKETTKRTYYGETRFTQGYGEGNEFLLQRS
YRFHELGKFWQGSVGNEFYLYFDTNSDPNQISPIRINQIQSIAELKLNGNLEKKIQRFWKQIRSMEPKLPLYHLWVHPSP
LEKDTEIQITVPSGTLRMANLPSNVLIEEKGRLIKLRTQDQTPFQISFEVYPDVSFPEFKVWFGKNQVPKSEIHVGYFGV
NLSACSKDCDLLYESQSFRPIIHPQTKVHFWKEGGLKKTYENKQELGTDALDILKKQGYVQ

Specific function: Unknown

COG id: COG3083

COG function: function code R; Predicted hydrolase of alkaline phosphatase superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sulfatase family [H]

Homologues:

Organism=Escherichia coli, GI87081924, Length=343, Percent_Identity=25.0728862973761, Blast_Score=81, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017849
- InterPro:   IPR017850
- InterPro:   IPR000917 [H]

Pfam domain/function: PF00884 Sulfatase [H]

EC number: 3.1.6.- [C]

Molecular weight: Translated: 71309; Mature: 71309

Theoretical pI: Translated: 7.79; Mature: 7.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEFPSFSIKNFLFRSSLSFHTIFIIIVFVFLPFCQKESSVSENGLEFSGEGNGIKNAKE
CCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCHH
TSSKPNVIWIVIDSLRGDIIGRYNVTPNLDLFAKEGVQFDYHLVNAAWTRPSTLVFFTGK
CCCCCCEEEEEEECCCCCEEEEECCCCCCCEEECCCCEEEEEEEEEECCCCCEEEEEECC
YASANPVNFWDYPTTKSETEAFYRSEKKPLPKLLKSSHYTTYMVGNNPFLTDRFGLGVDV
CCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHCCCCEEEEECCCCEEECCCCCCEEC
GFDFLYDFSNYGEDTKKITNKTMEVIEEVVSKNNPFFLFLNYNDPHKPYTPPPGFTSRIL
CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHH
TKEVLDERKLNYLGEVAFVDEELGKVFEAIKTKGLWENSLILITADHGEVMHASHAISPF
HHHHHHHHHHHHHHCEEEHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEECCCCCCCC
TGTNTFYGHGQDLFLENIHVPLLIKLPNSSFKKAVPSMTRSIDLYPTVLDYIGIPIPKNI
CCCCCEECCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCC
HGLSLRPIIEGKETTKRTYYGETRFTQGYGEGNEFLLQRSYRFHELGKFWQGSVGNEFYL
CCCEEEEEECCCCCCCEEEECCCCEECCCCCCCHHHHHCCCCHHHHHHHHCCCCCCEEEE
YFDTNSDPNQISPIRINQIQSIAELKLNGNLEKKIQRFWKQIRSMEPKLPLYHLWVHPSP
EEECCCCCCCCCCEEHHHHHHHHHEEECCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCC
LEKDTEIQITVPSGTLRMANLPSNVLIEEKGRLIKLRTQDQTPFQISFEVYPDVSFPEFK
CCCCCEEEEEECCCCEEEECCCCCEEEECCCCEEEEEECCCCCEEEEEEECCCCCCCCEE
VWFGKNQVPKSEIHVGYFGVNLSACSKDCDLLYESQSFRPIIHPQTKVHFWKEGGLKKTY
EEECCCCCCHHHEEEEEEEEEHHHCCCCCCEEECCCCCCEEECCCCEEEEECCCCCCCHH
ENKQELGTDALDILKKQGYVQ
CCHHHHCCHHHHHHHHCCCCC
>Mature Secondary Structure
MKEFPSFSIKNFLFRSSLSFHTIFIIIVFVFLPFCQKESSVSENGLEFSGEGNGIKNAKE
CCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCCCCCCCHH
TSSKPNVIWIVIDSLRGDIIGRYNVTPNLDLFAKEGVQFDYHLVNAAWTRPSTLVFFTGK
CCCCCCEEEEEEECCCCCEEEEECCCCCCCEEECCCCEEEEEEEEEECCCCCEEEEEECC
YASANPVNFWDYPTTKSETEAFYRSEKKPLPKLLKSSHYTTYMVGNNPFLTDRFGLGVDV
CCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHCCCCEEEEECCCCEEECCCCCCEEC
GFDFLYDFSNYGEDTKKITNKTMEVIEEVVSKNNPFFLFLNYNDPHKPYTPPPGFTSRIL
CHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHH
TKEVLDERKLNYLGEVAFVDEELGKVFEAIKTKGLWENSLILITADHGEVMHASHAISPF
HHHHHHHHHHHHHHCEEEHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEEECCCCCCCC
TGTNTFYGHGQDLFLENIHVPLLIKLPNSSFKKAVPSMTRSIDLYPTVLDYIGIPIPKNI
CCCCCEECCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCC
HGLSLRPIIEGKETTKRTYYGETRFTQGYGEGNEFLLQRSYRFHELGKFWQGSVGNEFYL
CCCEEEEEECCCCCCCEEEECCCCEECCCCCCCHHHHHCCCCHHHHHHHHCCCCCCEEEE
YFDTNSDPNQISPIRINQIQSIAELKLNGNLEKKIQRFWKQIRSMEPKLPLYHLWVHPSP
EEECCCCCCCCCCEEHHHHHHHHHEEECCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCC
LEKDTEIQITVPSGTLRMANLPSNVLIEEKGRLIKLRTQDQTPFQISFEVYPDVSFPEFK
CCCCCEEEEEECCCCEEEECCCCCEEEECCCCEEEEEECCCCCEEEEEEECCCCCCCCEE
VWFGKNQVPKSEIHVGYFGVNLSACSKDCDLLYESQSFRPIIHPQTKVHFWKEGGLKKTY
EEECCCCCCHHHEEEEEEEEEHHHCCCCCCEEECCCCCCEEECCCCEEEEECCCCCCCHH
ENKQELGTDALDILKKQGYVQ
CCHHHHCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]