Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183222244
Identifier: 183222244
GI number: 183222244
Start: 2985440
End: 2986387
Strand: Reverse
Name: 183222244
Synonym: LEPBI_I2895
Alternate gene names: NA
Gene position: 2986387-2985440 (Counterclockwise)
Preceding gene: 183222246
Following gene: 183222241
Centisome position: 82.96
GC content: 41.98
Gene sequence:
>948_bases ATGAAAATAACTCTTTTTGGTGTACGAGGTTCCCTTCCTACACCGATATCAAAACAGGAACAACGAGAAAAAACCTTAAA GATTCTGCATTTGGCCAAAGAAGAGTGGAAAAAAGATCCAAGTGGATTTTCGGAAGAAGAGTTTCTAAACCACCTACCCA TTCCACTTTCACAAGACTTAGGTGGGAATACAACTTGTGTCCTCATTGAAGGGGACGGAGGCGAAAGGGTCATTTTGGAC ATGGGAACGGGCTTACGAGTCCTTGGAAACCAATTGGCTCCCGAAGCTTTCAGCGGTAAGGACATGGATCTCCATATCCT TGTTTCACATACACATTGGGATCATATCCAAGGTTGGCCATTTTTCAAACCTGGTTATTCACCGTCAGTGAACATTCATT TTTATTCCTGTATTCCAAATTTACAAGAACGGTTGGAGAGACAACAACACCCAGAAAACTTTCCCATCACCTTCCAACAA ATGGCGTCTAAAAAACATTTCCACTTATGGAAAGAATTTGAATCCTATATGTTAGGTGGATTAAAAATCATTCCCTTTGG TCTTCGCCATCCTGGGTCCTGCACGGGGTATCGTATCAGAGAAGGGAATAAAATCTTTTTATTTTGTACAGATGTAGAAT ACCGCGAAGAAGATAGAGAACATCTATTAAAGATGAAACCTCAAATTGCTGGGGCCGATCTCATCATCATCGATGCACAA TATAGCACTTCAGAGGCTGAGAAAAAAATTGGATGGGGGCATACAGCTGTCAGTAAGGCAGTTGAATTTGCTGAGATGAT GGAGATTCGTTCTGTTGTGTTGACTCACCATGAACCAGACCATACCGACCATGAAGTGGCAAGGATCATTTTGGATGAAG CAAGGCTCCTGAAACCAGGTGGTATGCAGGTTCACATTGCCCATGAAGGCCAAAAGTTTATATTGTAG
Upstream 100 bases:
>100_bases TTTTGGTAGTAAACTTCCAAAGTTTTTCTTGGATTTCTGGATTAACTAACAATTGCATTTCTTCCGATGATTTAATGTCA GGATTTTAAAAAGGAACTAG
Downstream 100 bases:
>100_bases AAAGAATGGTTTGGCCCTTTGACTCAATTTTCGAGTGATTGGGAATGTCTTTCAATGAAAGAATCAATCAATCTTTGACT CACTCATTGATTAAATAATT
Product: putative metallo-beta-lactamase superfamily protein
Products: NA
Alternate protein names: Beta-Lactamase Domain Protein; Metal-Dependent Hydrolase; Metallo-Beta-Lactamase Family Protein; Beta-Lactamase Superfamily Hydrolase; Beta-Lactamase-Like; Beta-Lactamase-Like Protein; Metallo-Beta-Lactamase Superfamily Protein; Metal Dependant Beta Lactamase Protein; Metallo-Beta-Lactamase Superfamily; Phytochrome Sensor Protein; Metal-Dependent Hydrolase Of Beta-Lactamase Superfamily I; GAF Domain/HD Domain Protein; Beta-Lactamase Family Hydrolase; Conserved Beta-Lactamase Domain Protein
Number of amino acids: Translated: 315; Mature: 315
Protein sequence:
>315_residues MKITLFGVRGSLPTPISKQEQREKTLKILHLAKEEWKKDPSGFSEEEFLNHLPIPLSQDLGGNTTCVLIEGDGGERVILD MGTGLRVLGNQLAPEAFSGKDMDLHILVSHTHWDHIQGWPFFKPGYSPSVNIHFYSCIPNLQERLERQQHPENFPITFQQ MASKKHFHLWKEFESYMLGGLKIIPFGLRHPGSCTGYRIREGNKIFLFCTDVEYREEDREHLLKMKPQIAGADLIIIDAQ YSTSEAEKKIGWGHTAVSKAVEFAEMMEIRSVVLTHHEPDHTDHEVARIILDEARLLKPGGMQVHIAHEGQKFIL
Sequences:
>Translated_315_residues MKITLFGVRGSLPTPISKQEQREKTLKILHLAKEEWKKDPSGFSEEEFLNHLPIPLSQDLGGNTTCVLIEGDGGERVILD MGTGLRVLGNQLAPEAFSGKDMDLHILVSHTHWDHIQGWPFFKPGYSPSVNIHFYSCIPNLQERLERQQHPENFPITFQQ MASKKHFHLWKEFESYMLGGLKIIPFGLRHPGSCTGYRIREGNKIFLFCTDVEYREEDREHLLKMKPQIAGADLIIIDAQ YSTSEAEKKIGWGHTAVSKAVEFAEMMEIRSVVLTHHEPDHTDHEVARIILDEARLLKPGGMQVHIAHEGQKFIL >Mature_315_residues MKITLFGVRGSLPTPISKQEQREKTLKILHLAKEEWKKDPSGFSEEEFLNHLPIPLSQDLGGNTTCVLIEGDGGERVILD MGTGLRVLGNQLAPEAFSGKDMDLHILVSHTHWDHIQGWPFFKPGYSPSVNIHFYSCIPNLQERLERQQHPENFPITFQQ MASKKHFHLWKEFESYMLGGLKIIPFGLRHPGSCTGYRIREGNKIFLFCTDVEYREEDREHLLKMKPQIAGADLIIIDAQ YSTSEAEKKIGWGHTAVSKAVEFAEMMEIRSVVLTHHEPDHTDHEVARIILDEARLLKPGGMQVHIAHEGQKFIL
Specific function: Unknown
COG id: COG1235
COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily I
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35960; Mature: 35960
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKITLFGVRGSLPTPISKQEQREKTLKILHLAKEEWKKDPSGFSEEEFLNHLPIPLSQDL CEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCC GGNTTCVLIEGDGGERVILDMGTGLRVLGNQLAPEAFSGKDMDLHILVSHTHWDHIQGWP CCCEEEEEEECCCCCEEEEECCCCHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCC FFKPGYSPSVNIHFYSCIPNLQERLERQQHPENFPITFQQMASKKHFHLWKEFESYMLGG CCCCCCCCEEEEEEEECCHHHHHHHHHHHCCCCCCEEHHHHCCCHHHHHHHHHHHHHHCC LKIIPFGLRHPGSCTGYRIREGNKIFLFCTDVEYREEDREHLLKMKPQIAGADLIIIDAQ EEEEEECCCCCCCCCCEEEECCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCEEEEECC YSTSEAEKKIGWGHTAVSKAVEFAEMMEIRSVVLTHHEPDHTDHEVARIILDEARLLKPG CCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC GMQVHIAHEGQKFIL CCEEEEEECCCEECC >Mature Secondary Structure MKITLFGVRGSLPTPISKQEQREKTLKILHLAKEEWKKDPSGFSEEEFLNHLPIPLSQDL CEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCCCCC GGNTTCVLIEGDGGERVILDMGTGLRVLGNQLAPEAFSGKDMDLHILVSHTHWDHIQGWP CCCEEEEEEECCCCCEEEEECCCCHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCC FFKPGYSPSVNIHFYSCIPNLQERLERQQHPENFPITFQQMASKKHFHLWKEFESYMLGG CCCCCCCCEEEEEEEECCHHHHHHHHHHHCCCCCCEEHHHHCCCHHHHHHHHHHHHHHCC LKIIPFGLRHPGSCTGYRIREGNKIFLFCTDVEYREEDREHLLKMKPQIAGADLIIIDAQ EEEEEECCCCCCCCCCEEEECCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCEEEEECC YSTSEAEKKIGWGHTAVSKAVEFAEMMEIRSVVLTHHEPDHTDHEVARIILDEARLLKPG CCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC GMQVHIAHEGQKFIL CCEEEEEECCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA