Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183222241
Identifier: 183222241
GI number: 183222241
Start: 2983246
End: 2983812
Strand: Reverse
Name: 183222241
Synonym: LEPBI_I2892
Alternate gene names: NA
Gene position: 2983812-2983246 (Counterclockwise)
Preceding gene: 183222244
Following gene: 183222240
Centisome position: 82.89
GC content: 36.86
Gene sequence:
>567_bases ATGAACGAAACGGACATGGTCACGGAGATCTTAGAAATATTCTGGAAAGAGAAACTTCGTTTCGCCCAATATTGTTTTGA TGAATTGTCGCATTTGGATGGCAAATCCTTTGTAGGCAAAACTGACAGCGGAAAATCACCTGAGTGGGTTTTGCATCAGA TGGTTTCCTATGATAAAACCTTCCGTTTTTACCTACCCATCTCATTAAAGATTAGTAGTTTTTTCTTTTTTAATAGTTTC AAAGACCAAGAGATCGAAAAAGATTTGGAATCCATTCGTGACCGATACACTCCACCGGCATTCCCATCTCATTTTTGGGA AATACAAATTTCCGAAGCCCACCAACTGAAAATCAAAGCAACCGATCCATTGGTAAAAGCTCAATGTGATGTTTGGAAAG AAGTTTTATTACAATTAGAATCGAAACTTTCTCTCATTTCGCAGACGGATGCCTATAGAAAAAGATATACATCTCTTACT GGAATTCATACGATTTCAGGAGCGATTAATAATTCGACAGAGTTTTGTCATCATCTTTGGAATACATACATGGCAAATCC AAATTAA
Upstream 100 bases:
>100_bases GGAAAGCTCATCATCGTTCATACCATGGAGTGGTAAACATCCTCAACACTTGGTTCTCAAAAAAGGATTCGCACTTGAAA AATACTTTCCCCTATCCAGG
Downstream 100 bases:
>100_bases GTATTATAAATTAGAATCAAAATGGAAAGAGTTTAGGAGAAATCAATGGGAAAAATTAAAGTAAAAACACCGTTAGTTGA GTTAGACGGCGATGAAATGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MNETDMVTEILEIFWKEKLRFAQYCFDELSHLDGKSFVGKTDSGKSPEWVLHQMVSYDKTFRFYLPISLKISSFFFFNSF KDQEIEKDLESIRDRYTPPAFPSHFWEIQISEAHQLKIKATDPLVKAQCDVWKEVLLQLESKLSLISQTDAYRKRYTSLT GIHTISGAINNSTEFCHHLWNTYMANPN
Sequences:
>Translated_188_residues MNETDMVTEILEIFWKEKLRFAQYCFDELSHLDGKSFVGKTDSGKSPEWVLHQMVSYDKTFRFYLPISLKISSFFFFNSF KDQEIEKDLESIRDRYTPPAFPSHFWEIQISEAHQLKIKATDPLVKAQCDVWKEVLLQLESKLSLISQTDAYRKRYTSLT GIHTISGAINNSTEFCHHLWNTYMANPN >Mature_188_residues MNETDMVTEILEIFWKEKLRFAQYCFDELSHLDGKSFVGKTDSGKSPEWVLHQMVSYDKTFRFYLPISLKISSFFFFNSF KDQEIEKDLESIRDRYTPPAFPSHFWEIQISEAHQLKIKATDPLVKAQCDVWKEVLLQLESKLSLISQTDAYRKRYTSLT GIHTISGAINNSTEFCHHLWNTYMANPN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22106; Mature: 22106
Theoretical pI: Translated: 6.39; Mature: 6.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNETDMVTEILEIFWKEKLRFAQYCFDELSHLDGKSFVGKTDSGKSPEWVLHQMVSYDKT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCE FRFYLPISLKISSFFFFNSFKDQEIEKDLESIRDRYTPPAFPSHFWEIQISEAHQLKIKA EEEEEEEEEEHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEEC TDPLVKAQCDVWKEVLLQLESKLSLISQTDAYRKRYTSLTGIHTISGAINNSTEFCHHLW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH NTYMANPN HHHCCCCC >Mature Secondary Structure MNETDMVTEILEIFWKEKLRFAQYCFDELSHLDGKSFVGKTDSGKSPEWVLHQMVSYDKT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCE FRFYLPISLKISSFFFFNSFKDQEIEKDLESIRDRYTPPAFPSHFWEIQISEAHQLKIKA EEEEEEEEEEHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCEEEEEEC TDPLVKAQCDVWKEVLLQLESKLSLISQTDAYRKRYTSLTGIHTISGAINNSTEFCHHLW CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH NTYMANPN HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA