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The map label for this gene is ydaM [H]

Identifier: 183222193

GI number: 183222193

Start: 2932700

End: 2934241

Strand: Reverse

Name: ydaM [H]

Synonym: LEPBI_I2842

Alternate gene names: 183222193

Gene position: 2934241-2932700 (Counterclockwise)

Preceding gene: 183222196

Following gene: 183222192

Centisome position: 81.51

GC content: 41.12

Gene sequence:

>1542_bases
ATGCTAACGTTCTTATCTATATCCTTTTTGGTCCTCTATGGTTTCGACATTGTAATGTTATTTTACTTCGGTTTACACAC
TTACCTCATGGTGTTTTTGTATAGCCGATACAAAGAAAATTGCGCAGAGGATGAATCCAAAATCCTCTCGATCAAAGATA
AAAATTTACCAGTTGTGACTGTGCAACTTCCGATTTTTAACGAATTTTATGTCGTAGATCGTTTGATTGAATCTGCATGC
AATTTACAATACCCCGCAAAAAAACTCCAAATCCAAGTCCTAGACGATTCCACTGATGAAACCGTTGAAAAAGTAGCAGG
ACTTGTTTCCCAATACAAAAAAAAGGGAATTTGGATCGAACACGTACACAGAACCAATCGCAAAGGCCATAAAGCCGGTG
CCTTGGATGAAGGTATGGCAAAAGCGAAAGGGGATTACATCGCCATCTTTGATGCTGATTTTACGCCGGATTCTGATTTT
TTACTTCGAACGATGGGCTATTTTGATGATGAGTCGATTGGAATGGTCCAAACTCGTTGGGGCCACATCAACGAAACATA
TAATGTTCTCACAAAAGCGCAAAGTTTTGGTATCGATGGACACTTTATGATCGAACAAGTGGCTCGTAATGGTTCTAGTC
TTTGGATGAACTTCAATGGGACTGCTGGGATCTGGAGAAGGTCTTGTATCGAAGATGCAGGTGGTTGGGAACACGACACT
CTCACAGAAGATTTTGATCTATCCTACCGTGCCGAGCTAAAAGGTTGGAAATTCCGATACATCAAAGATGTGGTTTGTAA
GGCTGAAATTCCGGCTACAATGAATGCCTACAAAGCCCAACAATTCCGTTGGTGCAAAGGTTCCATCCAAACAGCAGTGA
AACTCATTCCTCGGATTTGGAAATCCAATGAATCTTGGAAAATCAAAGGTGAAGCCATCACTCACCTCATCAATTATTCG
GTTCACCCACTCATGATCATCAACATCTTACTCACAGCTCCTCTCCTTCTTATGGAATACTGGGCTGGATTTAAGATGGA
AGACCTCCCGATGGAAATTTTATTCGGATCCGCTGCCTTCCTTTCGATTGGTTCTATGGGACCGGTTATTTTCTATGCCT
ATTCCCAACGAGAAATCCACAAAAACTGGAAATCAAAACTCATTTACTTACCTGTTCTTGTGATGATAGGAACAGGAATC
GCCGTCATGAATACATATGCTTGGATGGAAGCTGTTTTTGGCATCCAGTCAGGTTTCAAACGCACTCCCAAACTTCGCAT
TGAGAAAGAAGGGGATAGTTTACAGGACAAAATCAAATATGTGGTTCCCGTAGATTACCGCGCTTTCCTAGAATTCTTCA
TGGGAGCCTATTGTTTGTTTTGTATCTATTTATCCTTCATGGTGGGAAAACCATACATGATTGGATTTATGGTTCTCTAT
TCCATCGGATTTTTCTATGTCTCTTATCTTTCTGTCGCTGAATCGTTTTGGAAATTCAAACCATCGACCAAGGCAGAAAA
GGAACTTCGTGCCGTCGCTTAA

Upstream 100 bases:

>100_bases
GGAATGGGTCCTGTTCGCAAACGAAAGAAATTCTAATTTTATTTGGCGGTGCACAAAATGTTTGACCAAAACAGCCCTTT
TGCCGATTTTGACTATAACT

Downstream 100 bases:

>100_bases
GGAAAGGCGATGGTACTTACTTGACGAAACCTTTCCTTCCAAAAAGCTGTAAATTCAACCTAGGTTCAGGGGTCATCCAT
GAGTGAAAAAGTCTACTGCG

Product: glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 513; Mature: 513

Protein sequence:

>513_residues
MLTFLSISFLVLYGFDIVMLFYFGLHTYLMVFLYSRYKENCAEDESKILSIKDKNLPVVTVQLPIFNEFYVVDRLIESAC
NLQYPAKKLQIQVLDDSTDETVEKVAGLVSQYKKKGIWIEHVHRTNRKGHKAGALDEGMAKAKGDYIAIFDADFTPDSDF
LLRTMGYFDDESIGMVQTRWGHINETYNVLTKAQSFGIDGHFMIEQVARNGSSLWMNFNGTAGIWRRSCIEDAGGWEHDT
LTEDFDLSYRAELKGWKFRYIKDVVCKAEIPATMNAYKAQQFRWCKGSIQTAVKLIPRIWKSNESWKIKGEAITHLINYS
VHPLMIINILLTAPLLLMEYWAGFKMEDLPMEILFGSAAFLSIGSMGPVIFYAYSQREIHKNWKSKLIYLPVLVMIGTGI
AVMNTYAWMEAVFGIQSGFKRTPKLRIEKEGDSLQDKIKYVVPVDYRAFLEFFMGAYCLFCIYLSFMVGKPYMIGFMVLY
SIGFFYVSYLSVAESFWKFKPSTKAEKELRAVA

Sequences:

>Translated_513_residues
MLTFLSISFLVLYGFDIVMLFYFGLHTYLMVFLYSRYKENCAEDESKILSIKDKNLPVVTVQLPIFNEFYVVDRLIESAC
NLQYPAKKLQIQVLDDSTDETVEKVAGLVSQYKKKGIWIEHVHRTNRKGHKAGALDEGMAKAKGDYIAIFDADFTPDSDF
LLRTMGYFDDESIGMVQTRWGHINETYNVLTKAQSFGIDGHFMIEQVARNGSSLWMNFNGTAGIWRRSCIEDAGGWEHDT
LTEDFDLSYRAELKGWKFRYIKDVVCKAEIPATMNAYKAQQFRWCKGSIQTAVKLIPRIWKSNESWKIKGEAITHLINYS
VHPLMIINILLTAPLLLMEYWAGFKMEDLPMEILFGSAAFLSIGSMGPVIFYAYSQREIHKNWKSKLIYLPVLVMIGTGI
AVMNTYAWMEAVFGIQSGFKRTPKLRIEKEGDSLQDKIKYVVPVDYRAFLEFFMGAYCLFCIYLSFMVGKPYMIGFMVLY
SIGFFYVSYLSVAESFWKFKPSTKAEKELRAVA
>Mature_513_residues
MLTFLSISFLVLYGFDIVMLFYFGLHTYLMVFLYSRYKENCAEDESKILSIKDKNLPVVTVQLPIFNEFYVVDRLIESAC
NLQYPAKKLQIQVLDDSTDETVEKVAGLVSQYKKKGIWIEHVHRTNRKGHKAGALDEGMAKAKGDYIAIFDADFTPDSDF
LLRTMGYFDDESIGMVQTRWGHINETYNVLTKAQSFGIDGHFMIEQVARNGSSLWMNFNGTAGIWRRSCIEDAGGWEHDT
LTEDFDLSYRAELKGWKFRYIKDVVCKAEIPATMNAYKAQQFRWCKGSIQTAVKLIPRIWKSNESWKIKGEAITHLINYS
VHPLMIINILLTAPLLLMEYWAGFKMEDLPMEILFGSAAFLSIGSMGPVIFYAYSQREIHKNWKSKLIYLPVLVMIGTGI
AVMNTYAWMEAVFGIQSGFKRTPKLRIEKEGDSLQDKIKYVVPVDYRAFLEFFMGAYCLFCIYLSFMVGKPYMIGFMVLY
SIGFFYVSYLSVAESFWKFKPSTKAEKELRAVA

Specific function: Unknown

COG id: COG1215

COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis

Gene ontology:

Cell location: Membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI87082284, Length=256, Percent_Identity=26.5625, Blast_Score=100, Evalue=3e-22,
Organism=Escherichia coli, GI1787259, Length=257, Percent_Identity=25.6809338521401, Blast_Score=90, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: NA

Molecular weight: Translated: 59052; Mature: 59052

Theoretical pI: Translated: 8.03; Mature: 8.03

Prosite motif: PS00217 SUGAR_TRANSPORT_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTFLSISFLVLYGFDIVMLFYFGLHTYLMVFLYSRYKENCAEDESKILSIKDKNLPVVT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEECCCCCEEE
VQLPIFNEFYVVDRLIESACNLQYPAKKLQIQVLDDSTDETVEKVAGLVSQYKKKGIWIE
EEECCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCHH
HVHRTNRKGHKAGALDEGMAKAKGDYIAIFDADFTPDSDFLLRTMGYFDDESIGMVQTRW
HHHHCCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCEEEECC
GHINETYNVLTKAQSFGIDGHFMIEQVARNGSSLWMNFNGTAGIWRRSCIEDAGGWEHDT
CCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCC
LTEDFDLSYRAELKGWKFRYIKDVVCKAEIPATMNAYKAQQFRWCKGSIQTAVKLIPRIW
CCCCCCCCEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSNESWKIKGEAITHLINYSVHPLMIINILLTAPLLLMEYWAGFKMEDLPMEILFGSAAF
CCCCCEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHH
LSIGSMGPVIFYAYSQREIHKNWKSKLIYLPVLVMIGTGIAVMNTYAWMEAVFGIQSGFK
HHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
RTPKLRIEKEGDSLQDKIKYVVPVDYRAFLEFFMGAYCLFCIYLSFMVGKPYMIGFMVLY
CCCCEEEECCCCCHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
SIGFFYVSYLSVAESFWKFKPSTKAEKELRAVA
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MLTFLSISFLVLYGFDIVMLFYFGLHTYLMVFLYSRYKENCAEDESKILSIKDKNLPVVT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEECCCCCEEE
VQLPIFNEFYVVDRLIESACNLQYPAKKLQIQVLDDSTDETVEKVAGLVSQYKKKGIWIE
EEECCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCHH
HVHRTNRKGHKAGALDEGMAKAKGDYIAIFDADFTPDSDFLLRTMGYFDDESIGMVQTRW
HHHHCCCCCCCCCCCHHHHHHCCCCEEEEEECCCCCCHHHHHHHHCCCCCCCCCEEEECC
GHINETYNVLTKAQSFGIDGHFMIEQVARNGSSLWMNFNGTAGIWRRSCIEDAGGWEHDT
CCCHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCCC
LTEDFDLSYRAELKGWKFRYIKDVVCKAEIPATMNAYKAQQFRWCKGSIQTAVKLIPRIW
CCCCCCCCEEECCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KSNESWKIKGEAITHLINYSVHPLMIINILLTAPLLLMEYWAGFKMEDLPMEILFGSAAF
CCCCCEEEEHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCHHH
LSIGSMGPVIFYAYSQREIHKNWKSKLIYLPVLVMIGTGIAVMNTYAWMEAVFGIQSGFK
HHCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
RTPKLRIEKEGDSLQDKIKYVVPVDYRAFLEFFMGAYCLFCIYLSFMVGKPYMIGFMVLY
CCCCEEEECCCCCHHHCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
SIGFFYVSYLSVAESFWKFKPSTKAEKELRAVA
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9341680; 9384377 [H]