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The map label for this gene is oppC [H]

Identifier: 183222187

GI number: 183222187

Start: 2928121

End: 2928891

Strand: Reverse

Name: oppC [H]

Synonym: LEPBI_I2836

Alternate gene names: 183222187

Gene position: 2928891-2928121 (Counterclockwise)

Preceding gene: 183222188

Following gene: 183222186

Centisome position: 81.37

GC content: 37.35

Gene sequence:

>771_bases
GTGCTCCTTAATACCATTCGGATTTTATTTTTCGGAACGATCGTTTGGGGAGTTCTATTTTTACCAGTGCCTTCCAATGT
AGATCTCATTCATAATAACTTACCTTTTTTTTCTGAAGGATATTTATTTGGAACAGATCGTTTGGGAAGAAATAATTTGG
CACTTTTTTGTTACGGCTCTTTGTCTACCATTTTGATCGTCATACCCGCAAGAATATTCACCATCATTTTTTCGTTTTTG
ATTTCGACTGTATCGTTGATTTTCCCGAAACGATCTGATTTTTTCTTATCTGGATTTGTGTCTGTTTCACTCTCCATCCC
TTCGTTATTGTCTGCCTTGATTGTCATCAGTATTCTGCCAGAAAGTCCGTTCTCATTACTAGTGGCAATCCTTGTATCGG
ATTGGGCAATTGTGTATGAAACATTAACAGCAAAAATTCGAGAGATCCAAACAAGTCCCTATATAGCTGCTTCTCTATGT
TTTGGAGCAAAACCTTACCAACTCATATGGTTACATTATCTACTGGCGCTAAAAAGTATGTTCCAGTTTTTATTTTTTTC
AGGGTTACCAACTGTCGTCATGACAACTGCGCTTTTTTCCTATTTAGGGATCCAAACATCAGTGGGAGAAACTGGGCCAG
GTTTGGGGGAACAAATTTCATTTTCGAAAGATTATTTCGATCAGTCACCTTTTTCGGTTTTGCTTCCGATCATTGCTATT
TTAACATTGGTGTATTCCTTGGGGTCTCGCAATCAAAAATATGAAACATAA

Upstream 100 bases:

>100_bases
GATTTATTATCTACATTACTTATGTATTCCGGTGTTCTTTTTTATATTTTAAATCGTCTTGGTTTCCATTTACAAAACTA
TTTTTCAGGGGAGTATCATC

Downstream 100 bases:

>100_bases
AATTTCAGCTTTTTTGCTAATATTGGGCCTTCTCGGGAACACGTTTCCACTTTTTTCGATTGATGATTATTATAATTTTC
CGAATCAATCTTATAAAGGA

Product: ABC transporter inner membrane protein

Products: NA

Alternate protein names: Stage 0 sporulation protein KC [H]

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MLLNTIRILFFGTIVWGVLFLPVPSNVDLIHNNLPFFSEGYLFGTDRLGRNNLALFCYGSLSTILIVIPARIFTIIFSFL
ISTVSLIFPKRSDFFLSGFVSVSLSIPSLLSALIVISILPESPFSLLVAILVSDWAIVYETLTAKIREIQTSPYIAASLC
FGAKPYQLIWLHYLLALKSMFQFLFFSGLPTVVMTTALFSYLGIQTSVGETGPGLGEQISFSKDYFDQSPFSVLLPIIAI
LTLVYSLGSRNQKYET

Sequences:

>Translated_256_residues
MLLNTIRILFFGTIVWGVLFLPVPSNVDLIHNNLPFFSEGYLFGTDRLGRNNLALFCYGSLSTILIVIPARIFTIIFSFL
ISTVSLIFPKRSDFFLSGFVSVSLSIPSLLSALIVISILPESPFSLLVAILVSDWAIVYETLTAKIREIQTSPYIAASLC
FGAKPYQLIWLHYLLALKSMFQFLFFSGLPTVVMTTALFSYLGIQTSVGETGPGLGEQISFSKDYFDQSPFSVLLPIIAI
LTLVYSLGSRNQKYET
>Mature_256_residues
MLLNTIRILFFGTIVWGVLFLPVPSNVDLIHNNLPFFSEGYLFGTDRLGRNNLALFCYGSLSTILIVIPARIFTIIFSFL
ISTVSLIFPKRSDFFLSGFVSVSLSIPSLLSALIVISILPESPFSLLVAILVSDWAIVYETLTAKIREIQTSPYIAASLC
FGAKPYQLIWLHYLLALKSMFQFLFFSGLPTVVMTTALFSYLGIQTSVGETGPGLGEQISFSKDYFDQSPFSVLLPIIAI
LTLVYSLGSRNQKYET

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane. Also required for sporulation and competence [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 28446; Mature: 28446

Theoretical pI: Translated: 7.40; Mature: 7.40

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLNTIRILFFGTIVWGVLFLPVPSNVDLIHNNLPFFSEGYLFGTDRLGRNNLALFCYGS
CCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCEEEECCCCCCCCEEEEEECC
LSTILIVIPARIFTIIFSFLISTVSLIFPKRSDFFLSGFVSVSLSIPSLLSALIVISILP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEECHHHHHHHHHHHHHCC
ESPFSLLVAILVSDWAIVYETLTAKIREIQTSPYIAASLCFGAKPYQLIWLHYLLALKSM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHH
FQFLFFSGLPTVVMTTALFSYLGIQTSVGETGPGLGEQISFSKDYFDQSPFSVLLPIIAI
HHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHH
LTLVYSLGSRNQKYET
HHHHHHHCCCCCCCCC
>Mature Secondary Structure
MLLNTIRILFFGTIVWGVLFLPVPSNVDLIHNNLPFFSEGYLFGTDRLGRNNLALFCYGS
CCHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCEEEECCCCCCCCEEEEEECC
LSTILIVIPARIFTIIFSFLISTVSLIFPKRSDFFLSGFVSVSLSIPSLLSALIVISILP
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEECHHHHHHHHHHHHHCC
ESPFSLLVAILVSDWAIVYETLTAKIREIQTSPYIAASLCFGAKPYQLIWLHYLLALKSM
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHH
FQFLFFSGLPTVVMTTALFSYLGIQTSVGETGPGLGEQISFSKDYFDQSPFSVLLPIIAI
HHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHH
LTLVYSLGSRNQKYET
HHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1901616; 1899858; 9384377 [H]