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The map label for this gene is yliC [C]

Identifier: 183222188

GI number: 183222188

Start: 2928881

End: 2929771

Strand: Reverse

Name: yliC [C]

Synonym: LEPBI_I2837

Alternate gene names: 183222188

Gene position: 2929771-2928881 (Counterclockwise)

Preceding gene: 183222189

Following gene: 183222187

Centisome position: 81.39

GC content: 34.46

Gene sequence:

>891_bases
GTGAAGTCGGAAGTATTCCGTTTCCTTTATTATCTTTTGCTTTTATCACTTGTGAGTAGTTATGTATCCGAGTTTCATAC
CAAGGATAAAATATATCTATACGCAGATTCAGGAATTTCAAATTTAAATTCAGAACAAACTGGTTTTTTAACTTCTTATA
TCAATTTTTGGGAAAGATTGGTGTTACGATCAGGTGGTTTGACTCAAAATGGCGAATCAGTGTATGGACATATTGGAAGC
CGTTTTTTTGCAACATTCCATCTAGCCATCTTTAGTATCTGTTTCGGCGCCATTTTTGCTTTTGGTTTGTCATTACTTTC
GATTTACCTTCGTTCTAGTAAATTATATAATTTTGTCTATTTTTTATCCAATTTTATCTTATCCACTCCCGTTTTCATTG
TCGCCATACTTTTGTTAATTGTCTTTTTCTATAAGTTAGAGTGGTTTCCTCCTGGTGGATACGAACCAGGAAATACTTAC
TTCATTGTACTTCCTGGTATTGCATTGGGATCCCGAATCTTTGCGAGATTGTCGCTCTACCTATTACCGGAAACACAAAA
AGAGTCCAAATCCAAATATACTTTATTGCTTCTGACAAGATCTTATCCATGGAGTCATATCGTAGGAGTCGAAATTTTTC
TAAAAGTATTACCGGTCGCTTTGATACTTTTGATATTGGATTTTGGATCATTGTTGTCTGGAGCAATGGTAGTCGAAGAA
ATTTTCTTTTTCCCTGGAGTAGGGAAGTCGTTATACTACTCTATCAAATCTATGGATACCGATTTATTATCTACATTACT
TATGTATTCCGGTGTTCTTTTTTATATTTTAAATCGTCTTGGTTTCCATTTACAAAACTATTTTTCAGGGGAGTATCATC
GTGCTCCTTAA

Upstream 100 bases:

>100_bases
ATCGCAAAAACCTTAAACATACCCGAAGAAAGAGAGAAACTCATCAAAGCCAAAAATTTCGAAGAAATCCAAAAGGCATT
CCTCTCAAAAAGTTAACGCT

Downstream 100 bases:

>100_bases
TACCATTCGGATTTTATTTTTCGGAACGATCGTTTGGGGAGTTCTATTTTTACCAGTGCCTTCCAATGTAGATCTCATTC
ATAATAACTTACCTTTTTTT

Product: ABC transporter inner membrane protein

Products: NA

Alternate protein names: Oligopeptide ABC Transporter Permease; ABC Transporter Inner Membrane Protein

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MKSEVFRFLYYLLLLSLVSSYVSEFHTKDKIYLYADSGISNLNSEQTGFLTSYINFWERLVLRSGGLTQNGESVYGHIGS
RFFATFHLAIFSICFGAIFAFGLSLLSIYLRSSKLYNFVYFLSNFILSTPVFIVAILLLIVFFYKLEWFPPGGYEPGNTY
FIVLPGIALGSRIFARLSLYLLPETQKESKSKYTLLLLTRSYPWSHIVGVEIFLKVLPVALILLILDFGSLLSGAMVVEE
IFFFPGVGKSLYYSIKSMDTDLLSTLLMYSGVLFYILNRLGFHLQNYFSGEYHRAP

Sequences:

>Translated_296_residues
MKSEVFRFLYYLLLLSLVSSYVSEFHTKDKIYLYADSGISNLNSEQTGFLTSYINFWERLVLRSGGLTQNGESVYGHIGS
RFFATFHLAIFSICFGAIFAFGLSLLSIYLRSSKLYNFVYFLSNFILSTPVFIVAILLLIVFFYKLEWFPPGGYEPGNTY
FIVLPGIALGSRIFARLSLYLLPETQKESKSKYTLLLLTRSYPWSHIVGVEIFLKVLPVALILLILDFGSLLSGAMVVEE
IFFFPGVGKSLYYSIKSMDTDLLSTLLMYSGVLFYILNRLGFHLQNYFSGEYHRAP
>Mature_296_residues
MKSEVFRFLYYLLLLSLVSSYVSEFHTKDKIYLYADSGISNLNSEQTGFLTSYINFWERLVLRSGGLTQNGESVYGHIGS
RFFATFHLAIFSICFGAIFAFGLSLLSIYLRSSKLYNFVYFLSNFILSTPVFIVAILLLIVFFYKLEWFPPGGYEPGNTY
FIVLPGIALGSRIFARLSLYLLPETQKESKSKYTLLLLTRSYPWSHIVGVEIFLKVLPVALILLILDFGSLLSGAMVVEE
IFFFPGVGKSLYYSIKSMDTDLLSTLLMYSGVLFYILNRLGFHLQNYFSGEYHRAP

Specific function: Probably Part Of The Binding-Protein-Dependent Transport System Yliabcd; Probably Responsible For The Translocation Of The Substrate Across The Membrane. [C]

COG id: COG0601

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787053, Length=249, Percent_Identity=24.0963855421687, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33791; Mature: 33791

Theoretical pI: Translated: 8.95; Mature: 8.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSEVFRFLYYLLLLSLVSSYVSEFHTKDKIYLYADSGISNLNSEQTGFLTSYINFWERL
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH
VLRSGGLTQNGESVYGHIGSRFFATFHLAIFSICFGAIFAFGLSLLSIYLRSSKLYNFVY
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLSNFILSTPVFIVAILLLIVFFYKLEWFPPGGYEPGNTYFIVLPGIALGSRIFARLSLY
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHH
LLPETQKESKSKYTLLLLTRSYPWSHIVGVEIFLKVLPVALILLILDFGSLLSGAMVVEE
CCCCHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFFFPGVGKSLYYSIKSMDTDLLSTLLMYSGVLFYILNRLGFHLQNYFSGEYHRAP
HHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MKSEVFRFLYYLLLLSLVSSYVSEFHTKDKIYLYADSGISNLNSEQTGFLTSYINFWERL
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH
VLRSGGLTQNGESVYGHIGSRFFATFHLAIFSICFGAIFAFGLSLLSIYLRSSKLYNFVY
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLSNFILSTPVFIVAILLLIVFFYKLEWFPPGGYEPGNTYFIVLPGIALGSRIFARLSLY
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHH
LLPETQKESKSKYTLLLLTRSYPWSHIVGVEIFLKVLPVALILLILDFGSLLSGAMVVEE
CCCCHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IFFFPGVGKSLYYSIKSMDTDLLSTLLMYSGVLFYILNRLGFHLQNYFSGEYHRAP
HHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA