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The map label for this gene is psd [H]

Identifier: 183221915

GI number: 183221915

Start: 2642914

End: 2645160

Strand: Reverse

Name: psd [H]

Synonym: LEPBI_I2554

Alternate gene names: 183221915

Gene position: 2645160-2642914 (Counterclockwise)

Preceding gene: 183221920

Following gene: 183221914

Centisome position: 73.48

GC content: 40.36

Gene sequence:

>2247_bases
ATGGAAACACTCTTTCAAAACGGATCTCAGTTTAATCTCATTTTAGGATCTGACATCCTAAGTCCTTATTTTTACCTCAT
CCTGATTGCCTCAGTTTACTTAAGCTTTCGGTTGGGATTTCCGCAGATTCGCTTCCTCTTTCTTTCCTTGAAAATCCTCA
CAGGGAATATGGATTTTAAAGGGTCCAAAGGGCAACTGGTCCATTCCCAAGCTTTTTTTGCGGGGATCGGATCTTCCTTA
CTTGCTGGATCCGTCATTGGAACCGCCCTCGCAATCGCCTATGGTGGGATTGGTGTTCTTTTTTGGATTTGGGTGATGAG
CTTACTTGTGATGCCAATTCGGTTTGTTTCGTCAACGCTTGCGGTAAAATTCCGTAACCAACTCCCTAGCGGGCGTTACC
TTTCGGGGCCCATGTATTTTATCGAAAAGGCCTTACGGGCAAAATGGCTCGCCGTTGCCTTTTCATTGGCCAGTCTTGTC
ACCGTTTTGGTATTTGGTGGGATTTTTCCATTTGTTGGACTCACATATTTGACAAAAGAAGGACTGAGTTTATCGGGTTT
GTCTGGTCCGATCTCCCTTTCTGTCATATTATTATTCATTGTTGTGGGCGGCGTTAGGCGAGTGGGTAGGGCTGCGAGTA
TCCTTGCCCCTATTGGGATTATTCTTTTTATATTTGGTTACGTTTCTCTTTTTTCGAATGGTATGATTTCCTTTTTTGGA
TTTTTGTCTGATGTCACAAAAGAAGCGTTTTCCATCAAAGCATTGCAAGGTGGTGGAGCTTTTGGGATCCTCCGTGGACT
TTCGGTTTCGCTCAGTACATTCTTTTTGTCTACAGAAACCGCAGTAGGAAAGTCTTCAGGGATAGCAGGAGTTGTGAGAA
CTGATTACGCCGCAAAACAAGGATTAGTGAGTATGCTCGCATCTTTTTTTGAGGGATTTATCATGGCAACCTTGGTGGGA
TATGTATTGTATTCCTATGGGGCCGTTAATTTGGATACCATCATAACTTTCCCTGGTCGGATTTTGGAGCAAAAGGATTC
CATTTCTGTGATCCTTTTTGTTGTATCGTTTCTATGTTTTGGGATCCTTAGTCTTGCTGGTTGGTTTTATAGTGGTGAAC
AAAACGCATTTTATGTGTTTGGTGAGAAGTTTGCCAATTTTTTTAGAATGTTATTCATCGGATCTACGCTTGGTTTTTCC
TATTTATATGTAAAATATGGAATCGAAGTTTTATCCTTTGTGATGCATTGGGGTTATGTGGCAGCTGTCATTACGAGCGT
GCCCCTCCTTGTTTCCTTAATGTTACTCGGAAAATCCGCTAATTTTGAATTAAAAAAATACCTCTCCGAGTCTGGGGCAA
GGTATGAAATTTTTAAAGATATTTATTTACTCTTTTTGACCTTACTTCCTAAAAACTTGATCTCTAAAATTTTCGGTTAC
TTTTCTACAATGAAGTTACCAAGATTTATGATGATCCCTATTTTAAAGGCTTTTGCAAAGGCATACAAAATCAATTTGAG
TGAAGCGGAATTGGAAATCAAAGAATATGCTTCCCTCAATCAGTTTTTCACAAGAGCACTCCGGGCAGAAGCGCGGATCA
TTGACTCTGCTCCGAATGCAGTGGTGTCTCCTACGGATTCCAAAATCACAAGTTTTGGAAACATCAACCAGTCGACCATC
ATCCAAGCAAAAGGAATTGACTATTCCGTAAAAGAATTGTTAGGTTCTGAGAAATTTTACCCTCATTTTACTAACGGAAA
ATACATTACCTTTTACCTTTCGCCCCAAGACTACCACCGTATTCACAGTCCATTTGCAGGTCAAATTTTAGGTTATTATT
ATGAACCAGGAAAATTGTTTCCTGTAAACGATTTGGCCGTACTCAATATCCGGGGGCTCTTTCCAAAAAACGAAAGGCTT
ATCACCTTCTTACAAACAGAATATGGTAAAATTGCCGTGATCAAAGTGGGGGCTTCCAATGTAGGAAAAATCCGAGTGAC
GTATGACAATAAAATTGTCACAAACAACTGGATCCGTTTTGCCAAAGAACATCACTATAAAGATGTTTCGATCATGATTG
AGAAGGGTTCAGAAATGGGCCGTTTTGAAATGGGCTCCACTGTCATCCTTGTCTTTGAAAATGGCACAATCGATTTGACA
AACATCCAACTCGGAGATAAAATCCAATACGGGACAACGGTAGGACATTTTAAATCCAAAAAGACAAGTTTACCGGTCAA
ATTTTAA

Upstream 100 bases:

>100_bases
TCCTTGTTCGGAAGAAACAAAATCAAAAAAACGAGAAACGAAAGGATTACAATACATCTTGACATAACAATTTCATCCAA
TTTCGTGAGGAAGAACCAAT

Downstream 100 bases:

>100_bases
GATGATGAATTCTCAACTTGCCACCTTTCCGAAAGAAATTTCCTTTGATGATGAGTATCTCTACATCGAGTGGAAGGATG
GGCATGGTAGCAAATATTCG

Product: bifunctional Sodium:alanine symporter/phosphatidylserine decarboxylase proenzyme/putative membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 748; Mature: 748

Protein sequence:

>748_residues
METLFQNGSQFNLILGSDILSPYFYLILIASVYLSFRLGFPQIRFLFLSLKILTGNMDFKGSKGQLVHSQAFFAGIGSSL
LAGSVIGTALAIAYGGIGVLFWIWVMSLLVMPIRFVSSTLAVKFRNQLPSGRYLSGPMYFIEKALRAKWLAVAFSLASLV
TVLVFGGIFPFVGLTYLTKEGLSLSGLSGPISLSVILLFIVVGGVRRVGRAASILAPIGIILFIFGYVSLFSNGMISFFG
FLSDVTKEAFSIKALQGGGAFGILRGLSVSLSTFFLSTETAVGKSSGIAGVVRTDYAAKQGLVSMLASFFEGFIMATLVG
YVLYSYGAVNLDTIITFPGRILEQKDSISVILFVVSFLCFGILSLAGWFYSGEQNAFYVFGEKFANFFRMLFIGSTLGFS
YLYVKYGIEVLSFVMHWGYVAAVITSVPLLVSLMLLGKSANFELKKYLSESGARYEIFKDIYLLFLTLLPKNLISKIFGY
FSTMKLPRFMMIPILKAFAKAYKINLSEAELEIKEYASLNQFFTRALRAEARIIDSAPNAVVSPTDSKITSFGNINQSTI
IQAKGIDYSVKELLGSEKFYPHFTNGKYITFYLSPQDYHRIHSPFAGQILGYYYEPGKLFPVNDLAVLNIRGLFPKNERL
ITFLQTEYGKIAVIKVGASNVGKIRVTYDNKIVTNNWIRFAKEHHYKDVSIMIEKGSEMGRFEMGSTVILVFENGTIDLT
NIQLGDKIQYGTTVGHFKSKKTSLPVKF

Sequences:

>Translated_748_residues
METLFQNGSQFNLILGSDILSPYFYLILIASVYLSFRLGFPQIRFLFLSLKILTGNMDFKGSKGQLVHSQAFFAGIGSSL
LAGSVIGTALAIAYGGIGVLFWIWVMSLLVMPIRFVSSTLAVKFRNQLPSGRYLSGPMYFIEKALRAKWLAVAFSLASLV
TVLVFGGIFPFVGLTYLTKEGLSLSGLSGPISLSVILLFIVVGGVRRVGRAASILAPIGIILFIFGYVSLFSNGMISFFG
FLSDVTKEAFSIKALQGGGAFGILRGLSVSLSTFFLSTETAVGKSSGIAGVVRTDYAAKQGLVSMLASFFEGFIMATLVG
YVLYSYGAVNLDTIITFPGRILEQKDSISVILFVVSFLCFGILSLAGWFYSGEQNAFYVFGEKFANFFRMLFIGSTLGFS
YLYVKYGIEVLSFVMHWGYVAAVITSVPLLVSLMLLGKSANFELKKYLSESGARYEIFKDIYLLFLTLLPKNLISKIFGY
FSTMKLPRFMMIPILKAFAKAYKINLSEAELEIKEYASLNQFFTRALRAEARIIDSAPNAVVSPTDSKITSFGNINQSTI
IQAKGIDYSVKELLGSEKFYPHFTNGKYITFYLSPQDYHRIHSPFAGQILGYYYEPGKLFPVNDLAVLNIRGLFPKNERL
ITFLQTEYGKIAVIKVGASNVGKIRVTYDNKIVTNNWIRFAKEHHYKDVSIMIEKGSEMGRFEMGSTVILVFENGTIDLT
NIQLGDKIQYGTTVGHFKSKKTSLPVKF
>Mature_748_residues
METLFQNGSQFNLILGSDILSPYFYLILIASVYLSFRLGFPQIRFLFLSLKILTGNMDFKGSKGQLVHSQAFFAGIGSSL
LAGSVIGTALAIAYGGIGVLFWIWVMSLLVMPIRFVSSTLAVKFRNQLPSGRYLSGPMYFIEKALRAKWLAVAFSLASLV
TVLVFGGIFPFVGLTYLTKEGLSLSGLSGPISLSVILLFIVVGGVRRVGRAASILAPIGIILFIFGYVSLFSNGMISFFG
FLSDVTKEAFSIKALQGGGAFGILRGLSVSLSTFFLSTETAVGKSSGIAGVVRTDYAAKQGLVSMLASFFEGFIMATLVG
YVLYSYGAVNLDTIITFPGRILEQKDSISVILFVVSFLCFGILSLAGWFYSGEQNAFYVFGEKFANFFRMLFIGSTLGFS
YLYVKYGIEVLSFVMHWGYVAAVITSVPLLVSLMLLGKSANFELKKYLSESGARYEIFKDIYLLFLTLLPKNLISKIFGY
FSTMKLPRFMMIPILKAFAKAYKINLSEAELEIKEYASLNQFFTRALRAEARIIDSAPNAVVSPTDSKITSFGNINQSTI
IQAKGIDYSVKELLGSEKFYPHFTNGKYITFYLSPQDYHRIHSPFAGQILGYYYEPGKLFPVNDLAVLNIRGLFPKNERL
ITFLQTEYGKIAVIKVGASNVGKIRVTYDNKIVTNNWIRFAKEHHYKDVSIMIEKGSEMGRFEMGSTVILVFENGTIDLT
NIQLGDKIQYGTTVGHFKSKKTSLPVKF

Specific function: Unknown

COG id: COG0688

COG function: function code I; Phosphatidylserine decarboxylase

Gene ontology:

Cell location: Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphatidylserine decarboxylase family. Type 1 subfamily [H]

Homologues:

Organism=Homo sapiens, GI13489112, Length=297, Percent_Identity=29.96632996633, Blast_Score=142, Evalue=2e-33,
Organism=Escherichia coli, GI1790604, Length=260, Percent_Identity=38.8461538461538, Blast_Score=178, Evalue=1e-45,
Organism=Escherichia coli, GI1786188, Length=300, Percent_Identity=24, Blast_Score=74, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI71980840, Length=270, Percent_Identity=29.2592592592593, Blast_Score=117, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI71980843, Length=270, Percent_Identity=29.2592592592593, Blast_Score=115, Evalue=8e-26,
Organism=Saccharomyces cerevisiae, GI6321609, Length=255, Percent_Identity=29.4117647058824, Blast_Score=96, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6324160, Length=166, Percent_Identity=36.144578313253, Blast_Score=93, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24649526, Length=330, Percent_Identity=30.3030303030303, Blast_Score=141, Evalue=2e-33,
Organism=Drosophila melanogaster, GI24649528, Length=330, Percent_Identity=30.3030303030303, Blast_Score=141, Evalue=2e-33,
Organism=Drosophila melanogaster, GI24649524, Length=330, Percent_Identity=30.3030303030303, Blast_Score=141, Evalue=2e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003817
- InterPro:   IPR005221 [H]

Pfam domain/function: PF02666 PS_Dcarbxylase [H]

EC number: =4.1.1.65 [H]

Molecular weight: Translated: 82785; Mature: 82785

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METLFQNGSQFNLILGSDILSPYFYLILIASVYLSFRLGFPQIRFLFLSLKILTGNMDFK
CCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEECCCCCC
GSKGQLVHSQAFFAGIGSSLLAGSVIGTALAIAYGGIGVLFWIWVMSLLVMPIRFVSSTL
CCCCCEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVKFRNQLPSGRYLSGPMYFIEKALRAKWLAVAFSLASLVTVLVFGGIFPFVGLTYLTKE
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLSLSGLSGPISLSVILLFIVVGGVRRVGRAASILAPIGIILFIFGYVSLFSNGMISFFG
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
FLSDVTKEAFSIKALQGGGAFGILRGLSVSLSTFFLSTETAVGKSSGIAGVVRTDYAAKQ
HHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHEEEECCCCCCCCCCCEEEHHHHHHHHH
GLVSMLASFFEGFIMATLVGYVLYSYGAVNLDTIITFPGRILEQKDSISVILFVVSFLCF
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHCCCCCHHHHHHHHHHHHH
GILSLAGWFYSGEQNAFYVFGEKFANFFRMLFIGSTLGFSYLYVKYGIEVLSFVMHWGYV
HHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAVITSVPLLVSLMLLGKSANFELKKYLSESGARYEIFKDIYLLFLTLLPKNLISKIFGY
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FSTMKLPRFMMIPILKAFAKAYKINLSEAELEIKEYASLNQFFTRALRAEARIIDSAPNA
HHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
VVSPTDSKITSFGNINQSTIIQAKGIDYSVKELLGSEKFYPHFTNGKYITFYLSPQDYHR
EECCCCCHHHCCCCCCCCEEEEECCCCHHHHHHCCCCCCCCEECCCCEEEEEECCCHHHH
IHSPFAGQILGYYYEPGKLFPVNDLAVLNIRGLFPKNERLITFLQTEYGKIAVIKVGASN
HCCCHHCCEEEEEECCCCEECCCCEEEEEEECCCCCCCCEEEEEECCCCCEEEEEECCCC
VGKIRVTYDNKIVTNNWIRFAKEHHYKDVSIMIEKGSEMGRFEMGSTVILVFENGTIDLT
CCEEEEEECCEEEEHHHHHHHHHHCCCCEEEEEECCCCCCCEECCCEEEEEEECCEEEEE
NIQLGDKIQYGTTVGHFKSKKTSLPVKF
EEEECCCEECCCCHHHCCCCCCCCCCCC
>Mature Secondary Structure
METLFQNGSQFNLILGSDILSPYFYLILIASVYLSFRLGFPQIRFLFLSLKILTGNMDFK
CCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHEECCCCCC
GSKGQLVHSQAFFAGIGSSLLAGSVIGTALAIAYGGIGVLFWIWVMSLLVMPIRFVSSTL
CCCCCEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AVKFRNQLPSGRYLSGPMYFIEKALRAKWLAVAFSLASLVTVLVFGGIFPFVGLTYLTKE
HHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GLSLSGLSGPISLSVILLFIVVGGVRRVGRAASILAPIGIILFIFGYVSLFSNGMISFFG
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHH
FLSDVTKEAFSIKALQGGGAFGILRGLSVSLSTFFLSTETAVGKSSGIAGVVRTDYAAKQ
HHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHEEEECCCCCCCCCCCEEEHHHHHHHHH
GLVSMLASFFEGFIMATLVGYVLYSYGAVNLDTIITFPGRILEQKDSISVILFVVSFLCF
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHCCCCCHHHHHHHHHHHHH
GILSLAGWFYSGEQNAFYVFGEKFANFFRMLFIGSTLGFSYLYVKYGIEVLSFVMHWGYV
HHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAVITSVPLLVSLMLLGKSANFELKKYLSESGARYEIFKDIYLLFLTLLPKNLISKIFGY
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
FSTMKLPRFMMIPILKAFAKAYKINLSEAELEIKEYASLNQFFTRALRAEARIIDSAPNA
HHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
VVSPTDSKITSFGNINQSTIIQAKGIDYSVKELLGSEKFYPHFTNGKYITFYLSPQDYHR
EECCCCCHHHCCCCCCCCEEEEECCCCHHHHHHCCCCCCCCEECCCCEEEEEECCCHHHH
IHSPFAGQILGYYYEPGKLFPVNDLAVLNIRGLFPKNERLITFLQTEYGKIAVIKVGASN
HCCCHHCCEEEEEECCCCEECCCCEEEEEEECCCCCCCCEEEEEECCCCCEEEEEECCCC
VGKIRVTYDNKIVTNNWIRFAKEHHYKDVSIMIEKGSEMGRFEMGSTVILVFENGTIDLT
CCEEEEEECCEEEEHHHHHHHHHHCCCCEEEEEECCCCCCCEECCCEEEEEEECCEEEEE
NIQLGDKIQYGTTVGHFKSKKTSLPVKF
EEEECCCEECCCCHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA