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The map label for this gene is yqkD [H]

Identifier: 183221899

GI number: 183221899

Start: 2626746

End: 2627660

Strand: Reverse

Name: yqkD [H]

Synonym: LEPBI_I2538

Alternate gene names: 183221899

Gene position: 2627660-2626746 (Counterclockwise)

Preceding gene: 183221902

Following gene: 183221896

Centisome position: 73.0

GC content: 36.39

Gene sequence:

>915_bases
ATGAAAAAACCTCTCAGTTTATTCCTTCTTATCATCACCTTGATCCTGCTAGTTGCTTCCATTTATTTTTCTGCATTTAT
TTTGACTCCGACTCTTCTTAGTCAAGTAGACGAAGGCAAAGACAAAAATCATATATCGTTCCAGGATTATAGTTTACCTG
AGCCTGAAACAATTCGTTTCCAAAATGGAACCTTACGACTCAGGGGTTGGTATTTTAAACATTCTAAAAAACAAAATTGT
GGTATGATTCTACTCCACGGATTTTCAGAATCAAAAATGCAAATGTTATCTTACGCACCTAGTTTTTGGAAACGTGGTTG
CAGTCTTTTTATGTATGATGCCCGTGCTCATGGGGAGAGTGATGGAAAATATTCTACTTTTGGATACCATGAAAAAATGG
ATTTGGAAAGAGCAGTGGAATACTTCTCTGAAATTGACAATACACCAGAAGATCGGATCGGAATCTTTGGAGTGAACTTA
GGTGCCGCCACAGCGTTACAATTTGCGGATGGCCAATTCGATTACGGATTTATCATTGCCGATACTTCTTTCAAAGACAT
GCGTTCTTATGTCGAACAATCTTATTCGATTGCCTATTCTCGGATGATTCGATTCATAACGCCTCTCAGTTTATCAATTG
CTGAATTACGGGGGGACTTACTTGTGAATGACGTATCACCACTCAATACAGCAAAATTCATCACGAAACCAGTTTTGTTA
CTGCATGACAAAAATGAGAAAACAATAGATCCAAGTGGATCCGAACTTATTTTTCAAAATCTAAAAACAAAATTCAAAAA
GATTTTCTATTATGAAGACTCTTTTGTTTTAAAAGACGAAAAAAAAATCTTAACTGAGGAATATGATGGCCACATAGAGA
TTTTTTTAAAGGAATACCGCCTCGCTAGCAAGTGA

Upstream 100 bases:

>100_bases
TGGAAAGAGAGCAATTCTTTTTCGGGCTAATTTAGGAGATTTTGAAAAATTCGCTTTCCACTTTCCTCTGTTCCTAGATT
TTCCTACTAGGTCCTCATTC

Downstream 100 bases:

>100_bases
CATTCCATTTGAATTCATAAAGATAATTATTTCAATTTCTATCGAAAAAGCATTCGAATCTGCGTAAATAAAATGGATTC
GGATCTTTTATCAATTTAAA

Product: alpha/beta family hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MKKPLSLFLLIITLILLVASIYFSAFILTPTLLSQVDEGKDKNHISFQDYSLPEPETIRFQNGTLRLRGWYFKHSKKQNC
GMILLHGFSESKMQMLSYAPSFWKRGCSLFMYDARAHGESDGKYSTFGYHEKMDLERAVEYFSEIDNTPEDRIGIFGVNL
GAATALQFADGQFDYGFIIADTSFKDMRSYVEQSYSIAYSRMIRFITPLSLSIAELRGDLLVNDVSPLNTAKFITKPVLL
LHDKNEKTIDPSGSELIFQNLKTKFKKIFYYEDSFVLKDEKKILTEEYDGHIEIFLKEYRLASK

Sequences:

>Translated_304_residues
MKKPLSLFLLIITLILLVASIYFSAFILTPTLLSQVDEGKDKNHISFQDYSLPEPETIRFQNGTLRLRGWYFKHSKKQNC
GMILLHGFSESKMQMLSYAPSFWKRGCSLFMYDARAHGESDGKYSTFGYHEKMDLERAVEYFSEIDNTPEDRIGIFGVNL
GAATALQFADGQFDYGFIIADTSFKDMRSYVEQSYSIAYSRMIRFITPLSLSIAELRGDLLVNDVSPLNTAKFITKPVLL
LHDKNEKTIDPSGSELIFQNLKTKFKKIFYYEDSFVLKDEKKILTEEYDGHIEIFLKEYRLASK
>Mature_304_residues
MKKPLSLFLLIITLILLVASIYFSAFILTPTLLSQVDEGKDKNHISFQDYSLPEPETIRFQNGTLRLRGWYFKHSKKQNC
GMILLHGFSESKMQMLSYAPSFWKRGCSLFMYDARAHGESDGKYSTFGYHEKMDLERAVEYFSEIDNTPEDRIGIFGVNL
GAATALQFADGQFDYGFIIADTSFKDMRSYVEQSYSIAYSRMIRFITPLSLSIAELRGDLLVNDVSPLNTAKFITKPVLL
LHDKNEKTIDPSGSELIFQNLKTKFKKIFYYEDSFVLKDEKKILTEEYDGHIEIFLKEYRLASK

Specific function: Unknown

COG id: COG1073

COG function: function code R; Hydrolases of the alpha/beta superfamily

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001375 [H]

Pfam domain/function: PF00326 Peptidase_S9 [H]

EC number: NA

Molecular weight: Translated: 35074; Mature: 35074

Theoretical pI: Translated: 6.89; Mature: 6.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKPLSLFLLIITLILLVASIYFSAFILTPTLLSQVDEGKDKNHISFQDYSLPEPETIRF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEEEE
QNGTLRLRGWYFKHSKKQNCGMILLHGFSESKMQMLSYAPSFWKRGCSLFMYDARAHGES
ECCEEEEEEEEEECCCCCCCCEEEEECCCHHHHHHHHCCHHHHHCCCEEEEEECCCCCCC
DGKYSTFGYHEKMDLERAVEYFSEIDNTPEDRIGIFGVNLGAATALQFADGQFDYGFIIA
CCCEEECCCHHHHCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHEEECCCCCCEEEEEE
DTSFKDMRSYVEQSYSIAYSRMIRFITPLSLSIAELRGDLLVNDVSPLNTAKFITKPVLL
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCEEEECCCCCCHHHHHHCCEEE
LHDKNEKTIDPSGSELIFQNLKTKFKKIFYYEDSFVLKDEKKILTEEYDGHIEIFLKEYR
EECCCCCCCCCCCHHHHHHHHHHHHHHEEEECCCEEEECHHHHHHHCCCCEEEEEEEHHH
LASK
HCCC
>Mature Secondary Structure
MKKPLSLFLLIITLILLVASIYFSAFILTPTLLSQVDEGKDKNHISFQDYSLPEPETIRF
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCEEEE
QNGTLRLRGWYFKHSKKQNCGMILLHGFSESKMQMLSYAPSFWKRGCSLFMYDARAHGES
ECCEEEEEEEEEECCCCCCCCEEEEECCCHHHHHHHHCCHHHHHCCCEEEEEECCCCCCC
DGKYSTFGYHEKMDLERAVEYFSEIDNTPEDRIGIFGVNLGAATALQFADGQFDYGFIIA
CCCEEECCCHHHHCHHHHHHHHHHHCCCCCCCEEEEEECCCHHHHEEECCCCCCEEEEEE
DTSFKDMRSYVEQSYSIAYSRMIRFITPLSLSIAELRGDLLVNDVSPLNTAKFITKPVLL
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCEEEECCCCCCHHHHHHCCEEE
LHDKNEKTIDPSGSELIFQNLKTKFKKIFYYEDSFVLKDEKKILTEEYDGHIEIFLKEYR
EECCCCCCCCCCCHHHHHHHHHHHHHHEEEECCCEEEECHHHHHHHCCCCEEEEEEEHHH
LASK
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]