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The map label for this gene is ybfF [C]

Identifier: 183221902

GI number: 183221902

Start: 2628977

End: 2629774

Strand: Reverse

Name: ybfF [C]

Synonym: LEPBI_I2541

Alternate gene names: 183221902

Gene position: 2629774-2628977 (Counterclockwise)

Preceding gene: 183221903

Following gene: 183221899

Centisome position: 73.06

GC content: 38.35

Gene sequence:

>798_bases
GTGAAATTAAGTTACAAACTCTACCCATTTCTAAATCAAGATTCAAATAAAAAATCAATTGGAGATATTATCATTTTACA
TGGGTTATTTGGTTCTTCGAAAAACTGGGTGACTGTTGGAAAGTTTTTATCCGAATTTGGGAATGTGTATACTTTGGACC
AAAGGAACCATGGAGATTCACCACATAGCGCAGAACATTCCATCCAAGTGATGGCAGGTGATCTAGAAGAATTCATTCTG
ACACATCAAATCCAAAAACCCGTTTTACTTGGCCACTCAATGGGTGGATTAGTCGCCATGTACTTTGATTTGACCCACCC
TGGTTTACTTCAAGAACTCATCATCCAAGATATCGCGCCAAGGTCTTATCCTTTCGCTTATGACAATGAAATCGCTTCTA
TGTCATTCCCTCTCGTTGGGTTTTCCTCACGTACCGAAATCGACCAGGAAATGGCAAAATTCGTCTCGGATAGTTTTATC
CGCCAATTTTTGCAAATGAGTTTGGAACGTAAGGAAGATGGATCTTACCATTGGAAATTGAATGTTGATGGTCTAAACCA
TGCAAGGAGAGTGTTTGAAGATGTATTTACTTTTGATCAAACGTCCGAAACTCCAACCTTGTTTTTATTAGGTGGAGAAT
CAGATTACATTCGAGAGTCAGATTTCAGCCTGATGGATCGGTTTTTTGATAAGAATCAAAAGGTCAGAATCAAAGGAGGT
GGGCATTACATTCATTTTACCCACCAAAAAGAATATTTGGATCAACTTGGGAAGTGGTTACAAAGTGAATTCACTTAA

Upstream 100 bases:

>100_bases
GGTCCAAGAGAAAAAAAACAAATCCTGCCTCATTTGCAAATCCTTAAGAAAGAATGTATTCGGTAATCGAAAACTGAAAA
TAATTTAGCAGGAAGTTTCT

Downstream 100 bases:

>100_bases
CTTCCTTCGCAATGACCAACCAATACTATTTAGATTACTCTTCTAGTAGCGAACGTAACATCCAAGCGGTTTTTTCATGT
ACATCCAATCTTTGTGTTAA

Product: putative esterase/lipase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MKLSYKLYPFLNQDSNKKSIGDIIILHGLFGSSKNWVTVGKFLSEFGNVYTLDQRNHGDSPHSAEHSIQVMAGDLEEFIL
THQIQKPVLLGHSMGGLVAMYFDLTHPGLLQELIIQDIAPRSYPFAYDNEIASMSFPLVGFSSRTEIDQEMAKFVSDSFI
RQFLQMSLERKEDGSYHWKLNVDGLNHARRVFEDVFTFDQTSETPTLFLLGGESDYIRESDFSLMDRFFDKNQKVRIKGG
GHYIHFTHQKEYLDQLGKWLQSEFT

Sequences:

>Translated_265_residues
MKLSYKLYPFLNQDSNKKSIGDIIILHGLFGSSKNWVTVGKFLSEFGNVYTLDQRNHGDSPHSAEHSIQVMAGDLEEFIL
THQIQKPVLLGHSMGGLVAMYFDLTHPGLLQELIIQDIAPRSYPFAYDNEIASMSFPLVGFSSRTEIDQEMAKFVSDSFI
RQFLQMSLERKEDGSYHWKLNVDGLNHARRVFEDVFTFDQTSETPTLFLLGGESDYIRESDFSLMDRFFDKNQKVRIKGG
GHYIHFTHQKEYLDQLGKWLQSEFT
>Mature_265_residues
MKLSYKLYPFLNQDSNKKSIGDIIILHGLFGSSKNWVTVGKFLSEFGNVYTLDQRNHGDSPHSAEHSIQVMAGDLEEFIL
THQIQKPVLLGHSMGGLVAMYFDLTHPGLLQELIIQDIAPRSYPFAYDNEIASMSFPLVGFSSRTEIDQEMAKFVSDSFI
RQFLQMSLERKEDGSYHWKLNVDGLNHARRVFEDVFTFDQTSETPTLFLLGGESDYIRESDFSLMDRFFDKNQKVRIKGG
GHYIHFTHQKEYLDQLGKWLQSEFT

Specific function: Unknown

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dmpD/todF/xylF esterase family [H]

Homologues:

Organism=Homo sapiens, GI23200008, Length=272, Percent_Identity=30.8823529411765, Blast_Score=137, Evalue=8e-33,
Organism=Homo sapiens, GI23200012, Length=256, Percent_Identity=31.25, Blast_Score=135, Evalue=5e-32,
Organism=Homo sapiens, GI223941839, Length=265, Percent_Identity=27.1698113207547, Blast_Score=105, Evalue=5e-23,
Organism=Escherichia coli, GI1786902, Length=265, Percent_Identity=28.6792452830189, Blast_Score=92, Evalue=5e-20,
Organism=Caenorhabditis elegans, GI17508535, Length=276, Percent_Identity=29.7101449275362, Blast_Score=107, Evalue=5e-24,
Organism=Caenorhabditis elegans, GI17507063, Length=260, Percent_Identity=28.0769230769231, Blast_Score=88, Evalue=4e-18,
Organism=Saccharomyces cerevisiae, GI6321468, Length=258, Percent_Identity=30.6201550387597, Blast_Score=99, Evalue=6e-22,
Organism=Drosophila melanogaster, GI24640348, Length=262, Percent_Identity=29.3893129770992, Blast_Score=119, Evalue=2e-27,
Organism=Drosophila melanogaster, GI24646055, Length=263, Percent_Identity=26.2357414448669, Blast_Score=93, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR012908 [H]

Pfam domain/function: PF00561 Abhydrolase_1; PF07819 PGAP1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 30538; Mature: 30538

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLSYKLYPFLNQDSNKKSIGDIIILHGLFGSSKNWVTVGKFLSEFGNVYTLDQRNHGDS
CCCCEEECCCCCCCCCCCCCCCEEEEEECCCCCCCEEHHHHHHHHHCCEEEECCCCCCCC
PHSAEHSIQVMAGDLEEFILTHQIQKPVLLGHSMGGLVAMYFDLTHPGLLQELIIQDIAP
CCCCCCCCEEECCCHHHHHHHHHHCCCCEECCCCCCCEEEEECCCCHHHHHHHHHHHCCC
RSYPFAYDNEIASMSFPLVGFSSRTEIDQEMAKFVSDSFIRQFLQMSLERKEDGSYHWKL
CCCCCCCCCCHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
NVDGLNHARRVFEDVFTFDQTSETPTLFLLGGESDYIRESDFSLMDRFFDKNQKVRIKGG
ECCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCEEEEECC
GHYIHFTHQKEYLDQLGKWLQSEFT
CEEEEECCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKLSYKLYPFLNQDSNKKSIGDIIILHGLFGSSKNWVTVGKFLSEFGNVYTLDQRNHGDS
CCCCEEECCCCCCCCCCCCCCCEEEEEECCCCCCCEEHHHHHHHHHCCEEEECCCCCCCC
PHSAEHSIQVMAGDLEEFILTHQIQKPVLLGHSMGGLVAMYFDLTHPGLLQELIIQDIAP
CCCCCCCCEEECCCHHHHHHHHHHCCCCEECCCCCCCEEEEECCCCHHHHHHHHHHHCCC
RSYPFAYDNEIASMSFPLVGFSSRTEIDQEMAKFVSDSFIRQFLQMSLERKEDGSYHWKL
CCCCCCCCCCHHHCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE
NVDGLNHARRVFEDVFTFDQTSETPTLFLLGGESDYIRESDFSLMDRFFDKNQKVRIKGG
ECCCCHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHCCCCEEEEECC
GHYIHFTHQKEYLDQLGKWLQSEFT
CEEEEECCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]