| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183221895
Identifier: 183221895
GI number: 183221895
Start: 2618364
End: 2619509
Strand: Reverse
Name: 183221895
Synonym: LEPBI_I2531
Alternate gene names: NA
Gene position: 2619509-2618364 (Counterclockwise)
Preceding gene: 183221896
Following gene: 183221894
Centisome position: 72.77
GC content: 33.07
Gene sequence:
>1146_bases ATGGCTAATAAGAAAAAAGATTCAGCAAATGAAGAAGTTATTTCTGATATAGAAGATGAAGATATGTCTTCCGGTGCATT GTTAAAGCACCCATTCGATCCTAAAAACATTGATATTATCACCAAACAGCCATCAATTGATATTCTGATCAAAAGACTGT CCGCAAATCCAAGTGAAATAGACTTATTTCCAGATTTTCAAAGAAAGGATAATCTCTGGGATAATATTAAGCAAAGTAGG TTGATTGAATCAATCTTGATTAGTTTTCCGTTGCCTGCATTCTATTTTGATGGTTCTGATGATAACAAATGGGTTGTAAT TGATGGATTACAGAGGTTGAGTACACTTAGAAATTTTGCGATTTCTAAGACTTTGAAACTAACAGGTTTAGAATTCTTAA CAAAGTTAAATGGAAAAACATTCGACCAATTAAATCGAACTCTTCAAAGGAAAATCGAAGAGACACAAGTAGTGGCCTAT ATAACTAACCCTGGAACTCCTCCGGAAGTGATGTATAATATTTTTAAACGAATTAACACTGGTGGTCTGATTTTGGAACC GCAGGAGATCCGTCATGCTCTAAATCAAGGAGTTCCCGCAAAATTTATAGAGGAATTGGCAAATTCAAATTCATTTAAGA CTGCAACTTTAAATTCCATTCCGACAAAAAGGATGATGGATCGGGAGCTAATCTCAAGATTTGTTTCCTTTTACATTCAC GGATATGAAAATTACCGGCCTGATTTAGATAGTTTTATGAATTCTGGGTTATCAAAACTTAAAAAATTAACTGAGAGTGA AATATTACAGATTACTTTAGATTTCGAAAAAGCGATGAATGCTTCAAATCGAATATTTGGCGATTGGGCATTTCGAAAAG CAAGTCATTATCCTGAAAGACGATCGAAGGTAAATAAACCTCTTTTTGAAGTCTGGAGTGTTTTACTTTCAAAATTGGAT TCTGTCGAATTGTTAAAGCTTGAAAATTCGAAAGAAAAGTTAATGGAAATTTTTTCTAATTTATGTAAATCTGATATGCA ATTTGTAGCAAGTATTACAAATGCAACGGGCGATGAAACTCGTGTTAAGCGTCGATTCGATAAAATTAAATCATTAATAA GTGAGATTCTAAGAAATGATAACTGA
Upstream 100 bases:
>100_bases GGGAAATTCAAATAAATGTATTTTCTTCTGGTTCAATTTGTAAAAAAATGTTTAATATTGATTTTTTAAAAAAGCACGAT AGATCAGTACTCTAACCAGA
Downstream 100 bases:
>100_bases ATTGAGCATTAAAAATTTCAAATCAATTAAAGAAAAAACAATAAAGCTCAGTCGTCTCAATGTGTTAACGGGTTTAAATG GAATGGGTAAATCCTCCTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 381; Mature: 380
Protein sequence:
>381_residues MANKKKDSANEEVISDIEDEDMSSGALLKHPFDPKNIDIITKQPSIDILIKRLSANPSEIDLFPDFQRKDNLWDNIKQSR LIESILISFPLPAFYFDGSDDNKWVVIDGLQRLSTLRNFAISKTLKLTGLEFLTKLNGKTFDQLNRTLQRKIEETQVVAY ITNPGTPPEVMYNIFKRINTGGLILEPQEIRHALNQGVPAKFIEELANSNSFKTATLNSIPTKRMMDRELISRFVSFYIH GYENYRPDLDSFMNSGLSKLKKLTESEILQITLDFEKAMNASNRIFGDWAFRKASHYPERRSKVNKPLFEVWSVLLSKLD SVELLKLENSKEKLMEIFSNLCKSDMQFVASITNATGDETRVKRRFDKIKSLISEILRNDN
Sequences:
>Translated_381_residues MANKKKDSANEEVISDIEDEDMSSGALLKHPFDPKNIDIITKQPSIDILIKRLSANPSEIDLFPDFQRKDNLWDNIKQSR LIESILISFPLPAFYFDGSDDNKWVVIDGLQRLSTLRNFAISKTLKLTGLEFLTKLNGKTFDQLNRTLQRKIEETQVVAY ITNPGTPPEVMYNIFKRINTGGLILEPQEIRHALNQGVPAKFIEELANSNSFKTATLNSIPTKRMMDRELISRFVSFYIH GYENYRPDLDSFMNSGLSKLKKLTESEILQITLDFEKAMNASNRIFGDWAFRKASHYPERRSKVNKPLFEVWSVLLSKLD SVELLKLENSKEKLMEIFSNLCKSDMQFVASITNATGDETRVKRRFDKIKSLISEILRNDN >Mature_380_residues ANKKKDSANEEVISDIEDEDMSSGALLKHPFDPKNIDIITKQPSIDILIKRLSANPSEIDLFPDFQRKDNLWDNIKQSRL IESILISFPLPAFYFDGSDDNKWVVIDGLQRLSTLRNFAISKTLKLTGLEFLTKLNGKTFDQLNRTLQRKIEETQVVAYI TNPGTPPEVMYNIFKRINTGGLILEPQEIRHALNQGVPAKFIEELANSNSFKTATLNSIPTKRMMDRELISRFVSFYIHG YENYRPDLDSFMNSGLSKLKKLTESEILQITLDFEKAMNASNRIFGDWAFRKASHYPERRSKVNKPLFEVWSVLLSKLDS VELLKLENSKEKLMEIFSNLCKSDMQFVASITNATGDETRVKRRFDKIKSLISEILRNDN
Specific function: Unknown
COG id: COG1479
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43843; Mature: 43712
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANKKKDSANEEVISDIEDEDMSSGALLKHPFDPKNIDIITKQPSIDILIKRLSANPSEI CCCCCCCCCHHHHHHCCCCCCCCCCCEEECCCCCCCCEEEECCCCHHHHHHHHCCCCCCE DLFPDFQRKDNLWDNIKQSRLIESILISFPLPAFYFDGSDDNKWVVIDGLQRLSTLRNFA ECCCCCCHHCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEHHHHHHHHHHHHH ISKTLKLTGLEFLTKLNGKTFDQLNRTLQRKIEETQVVAYITNPGTPPEVMYNIFKRINT HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCEEEEEEECCCCCHHHHHHHHHHCCC GGLILEPQEIRHALNQGVPAKFIEELANSNSFKTATLNSIPTKRMMDRELISRFVSFYIH CCEEECHHHHHHHHHCCCCHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHH GYENYRPDLDSFMNSGLSKLKKLTESEILQITLDFEKAMNASNRIFGDWAFRKASHYPER CCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEHHHHCCCCCCCHHHHHHHHHHCCCHH RSKVNKPLFEVWSVLLSKLDSVELLKLENSKEKLMEIFSNLCKSDMQFVASITNATGDET HHHHCCCHHHHHHHHHHHCCCCEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH RVKRRFDKIKSLISEILRNDN HHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ANKKKDSANEEVISDIEDEDMSSGALLKHPFDPKNIDIITKQPSIDILIKRLSANPSEI CCCCCCCCHHHHHHCCCCCCCCCCCEEECCCCCCCCEEEECCCCHHHHHHHHCCCCCCE DLFPDFQRKDNLWDNIKQSRLIESILISFPLPAFYFDGSDDNKWVVIDGLQRLSTLRNFA ECCCCCCHHCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEHHHHHHHHHHHHH ISKTLKLTGLEFLTKLNGKTFDQLNRTLQRKIEETQVVAYITNPGTPPEVMYNIFKRINT HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCEEEEEEECCCCCHHHHHHHHHHCCC GGLILEPQEIRHALNQGVPAKFIEELANSNSFKTATLNSIPTKRMMDRELISRFVSFYIH CCEEECHHHHHHHHHCCCCHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHH GYENYRPDLDSFMNSGLSKLKKLTESEILQITLDFEKAMNASNRIFGDWAFRKASHYPER CCCCCCCCHHHHHHHHHHHHHHHHHHHHEEEEEEHHHHCCCCCCCHHHHHHHHHHCCCHH RSKVNKPLFEVWSVLLSKLDSVELLKLENSKEKLMEIFSNLCKSDMQFVASITNATGDET HHHHCCCHHHHHHHHHHHCCCCEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH RVKRRFDKIKSLISEILRNDN HHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA