| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221894
Identifier: 183221894
GI number: 183221894
Start: 2617277
End: 2618362
Strand: Reverse
Name: 183221894
Synonym: LEPBI_I2530
Alternate gene names: NA
Gene position: 2618362-2617277 (Counterclockwise)
Preceding gene: 183221895
Following gene: 183221893
Centisome position: 72.74
GC content: 32.69
Gene sequence:
>1086_bases TTGAGCATTAAAAATTTCAAATCAATTAAAGAAAAAACAATAAAGCTCAGTCGTCTCAATGTGTTAACGGGTTTAAATGG AATGGGTAAATCCTCCTTTATACAAATTATTTTATCTTTGAATGCTAGTAGTAGATTAAGTGAAGGAGAATTATCTTTAG TTAATCAATTTGTAGATATAGGAAAGGGTAGAGACGCACTTTATCAATTCGCTAGCGAGGAAACTATCAATATTGGAGTG AAATTTGTGAATGGTGGAAGTTTCAATTGGCTATTTGATTACGATTCTGAAAGTCAAGTGTTACATTCAAATTTTAGAAT TTCTAGTACAGAACTTTCGACATATTCATTATTTAATGACAATCTCAAATATTTAAATGCAGAAAGGATTAGTCCTCGAA GTATTTATAAAACTTCCTTTGGAGTTGTCAACAACTTGAAGCAACTTGGAAATTCTGGTGAATACGCTACACATTTTCTG CATACATTTGGAAATAAAAAATTGACTCCTGCCTTGCTTTTGCATCCAAAAGGGAAGTCTGAAATTCTTATACATCAAGT AGAAGCTTGGCTATCTGAAATTAGTCCTGGCGTTAAACTTAACACGACTGAAATTCCAGGAACGGAAAATATACTTCTAG ATTATCAATTCGAGACTAAGGATGGTTTTACTTCTAGGTTTAAACCACAAAATGTTGGATTTGGGTTAAGTTATACTCTG CCCGTAATCACAATGCTCTTATCATCCAAACCGGAAGATATTCTCATAATCGAAAATCCCGAATCTCATGTCCATCCTCG TGGGCAAGCAGAATTAGGAAAACTCCTTGCACTATGTTCTGCGAATGGCACTCAATTAATTATAGAGACACATAGTGATC ATATAATCAACGGTATCAGGGTGTCCGTTAAAGAAAAAAAGGTTAATCATAGGGATGTTAATGTCCTGTTTTTTAATAGA ATAGATTATGAGTCAGAACAATATTCTGAAATAACAAATATTAAAGTTGATAATGAAGGAAATTTGAGTAATTATCCTAA GAATTTTTTAGATGAGTGGAATAACCAGCTACTAAAGTTGATTTGA
Upstream 100 bases:
>100_bases GCAAGTATTACAAATGCAACGGGCGATGAAACTCGTGTTAAGCGTCGATTCGATAAAATTAAATCATTAATAAGTGAGAT TCTAAGAAATGATAACTGAA
Downstream 100 bases:
>100_bases TATGGATGTTTATTTCAACGAACTATCTTTAGGGAATAGCGTTATTTTAAAGGATAAAATTGACGAAGGGATGATTCAAT TTATAAAGACGTTTCAATCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 361; Mature: 360
Protein sequence:
>361_residues MSIKNFKSIKEKTIKLSRLNVLTGLNGMGKSSFIQIILSLNASSRLSEGELSLVNQFVDIGKGRDALYQFASEETINIGV KFVNGGSFNWLFDYDSESQVLHSNFRISSTELSTYSLFNDNLKYLNAERISPRSIYKTSFGVVNNLKQLGNSGEYATHFL HTFGNKKLTPALLLHPKGKSEILIHQVEAWLSEISPGVKLNTTEIPGTENILLDYQFETKDGFTSRFKPQNVGFGLSYTL PVITMLLSSKPEDILIIENPESHVHPRGQAELGKLLALCSANGTQLIIETHSDHIINGIRVSVKEKKVNHRDVNVLFFNR IDYESEQYSEITNIKVDNEGNLSNYPKNFLDEWNNQLLKLI
Sequences:
>Translated_361_residues MSIKNFKSIKEKTIKLSRLNVLTGLNGMGKSSFIQIILSLNASSRLSEGELSLVNQFVDIGKGRDALYQFASEETINIGV KFVNGGSFNWLFDYDSESQVLHSNFRISSTELSTYSLFNDNLKYLNAERISPRSIYKTSFGVVNNLKQLGNSGEYATHFL HTFGNKKLTPALLLHPKGKSEILIHQVEAWLSEISPGVKLNTTEIPGTENILLDYQFETKDGFTSRFKPQNVGFGLSYTL PVITMLLSSKPEDILIIENPESHVHPRGQAELGKLLALCSANGTQLIIETHSDHIINGIRVSVKEKKVNHRDVNVLFFNR IDYESEQYSEITNIKVDNEGNLSNYPKNFLDEWNNQLLKLI >Mature_360_residues SIKNFKSIKEKTIKLSRLNVLTGLNGMGKSSFIQIILSLNASSRLSEGELSLVNQFVDIGKGRDALYQFASEETINIGVK FVNGGSFNWLFDYDSESQVLHSNFRISSTELSTYSLFNDNLKYLNAERISPRSIYKTSFGVVNNLKQLGNSGEYATHFLH TFGNKKLTPALLLHPKGKSEILIHQVEAWLSEISPGVKLNTTEIPGTENILLDYQFETKDGFTSRFKPQNVGFGLSYTLP VITMLLSSKPEDILIIENPESHVHPRGQAELGKLLALCSANGTQLIIETHSDHIINGIRVSVKEKKVNHRDVNVLFFNRI DYESEQYSEITNIKVDNEGNLSNYPKNFLDEWNNQLLKLI
Specific function: Unknown
COG id: COG4938
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40678; Mature: 40547
Theoretical pI: Translated: 7.09; Mature: 7.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIKNFKSIKEKTIKLSRLNVLTGLNGMGKSSFIQIILSLNASSRLSEGELSLVNQFVDI CCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEEEEECCCCCCCCCCHHHHHHHHHHC GKGRDALYQFASEETINIGVKFVNGGSFNWLFDYDSESQVLHSNFRISSTELSTYSLFND CCCHHHHHHHCCCCEEEEEEEEEECCCEEEEEECCCCCCEECCCCEEECCCCEEEEEECC NLKYLNAERISPRSIYKTSFGVVNNLKQLGNSGEYATHFLHTFGNKKLTPALLLHPKGKS CCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEECCCCCC EILIHQVEAWLSEISPGVKLNTTEIPGTENILLDYQFETKDGFTSRFKPQNVGFGLSYTL HHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHH PVITMLLSSKPEDILIIENPESHVHPRGQAELGKLLALCSANGTQLIIETHSDHIINGIR HHHHHHHCCCCCCEEEEECCHHHCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCEECCEE VSVKEKKVNHRDVNVLFFNRIDYESEQYSEITNIKVDNEGNLSNYPKNFLDEWNNQLLKL EEEEECCCCCCCEEEEEEEECCCCCHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHC I C >Mature Secondary Structure SIKNFKSIKEKTIKLSRLNVLTGLNGMGKSSFIQIILSLNASSRLSEGELSLVNQFVDI CCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEEEEECCCCCCCCCCHHHHHHHHHHC GKGRDALYQFASEETINIGVKFVNGGSFNWLFDYDSESQVLHSNFRISSTELSTYSLFND CCCHHHHHHHCCCCEEEEEEEEEECCCEEEEEECCCCCCEECCCCEEECCCCEEEEEECC NLKYLNAERISPRSIYKTSFGVVNNLKQLGNSGEYATHFLHTFGNKKLTPALLLHPKGKS CCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCEEEECCCCCC EILIHQVEAWLSEISPGVKLNTTEIPGTENILLDYQFETKDGFTSRFKPQNVGFGLSYTL HHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHH PVITMLLSSKPEDILIIENPESHVHPRGQAELGKLLALCSANGTQLIIETHSDHIINGIR HHHHHHHCCCCCCEEEEECCHHHCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCEECCEE VSVKEKKVNHRDVNVLFFNRIDYESEQYSEITNIKVDNEGNLSNYPKNFLDEWNNQLLKL EEEEECCCCCCCEEEEEEEECCCCCHHHHHHHEEEECCCCCCCCCCHHHHHHHHHHHHHC I C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA