| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221883
Identifier: 183221883
GI number: 183221883
Start: 2602741
End: 2603508
Strand: Reverse
Name: 183221883
Synonym: LEPBI_I2518
Alternate gene names: NA
Gene position: 2603508-2602741 (Counterclockwise)
Preceding gene: 183221893
Following gene: 183221881
Centisome position: 72.33
GC content: 43.62
Gene sequence:
>768_bases ATGAAAATGACAATCAACCTAATCTTGGCCATGCTATTTGCAACTAGCATAAGTGCCGAAACATTCACCGTGTTCATCCA CGGGAAATCCAGTAAAAACCACGACGGTGTCGGAACTACCGATGTAAACAGCTATTGGGGAACAAACGCCAATGCGGTTT CAGGTTCCAAGGTTTTTATTGGCTACGACGGAAGTACTGATCCAAGGACATATGGAACGGCGAGAGCCCAAACCAATATT GCAACTGGCCTTACGAATTATTGTAAAGGAACAAATACGTGTAAGGTGGTTTGTCATTCAGCAGGATGTTATGCGATTGA ATATTGGTTAGCAAATCTAGGTGATACAATCACTTCAAAAGGATTCAATATCACAAAGGTAACTGCTTTAGCGGCTGCTT CTGGCGGTTCTGAATTAGCAAATTTAGTTGGTGGATCTGGAAACGCAATGGATCGATCACTTGTCGTGACAACAGCTCGC GGTGCATACAATCACAACTTAACAGCTTCCGTTCTAGTGAATCATGTCCCAGGGTATAAAACTCGATTTGGTTCTTCGTT TATTTTGCCAGGTGCTGATGACTATGCAGTTGCATTCCACTCTTCTTGTGGATACAATCGTGCTGGTGGACTTGATAAGT GCCAAACATCCTTTGTCAGTGGGCAAACGACTTACACGCAGTATGCGGGTCACGTACGCGCACCGTCCTTAACAGCAGCT GGATTGAACAAAAATCATAGCGAAATTATGAACGAGGGTACAAGATAA
Upstream 100 bases:
>100_bases TATTTATATGTTTAACAGAGATAAATATGGCATTTGTAATAATATTTGACACGAATTGGGCAAAATTGTAAGCGTGGTGC TACTTGAAAAGGAGTATCAG
Downstream 100 bases:
>100_bases AATTTGTAAAATTTGTAAGGGTTCGGCAAAACAAATTGTCGAACCCATAGATTTTTGAAAGAGAAAACCTTGATTAAATA CTCTTCATACAAAATCTTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 255; Mature: 255
Protein sequence:
>255_residues MKMTINLILAMLFATSISAETFTVFIHGKSSKNHDGVGTTDVNSYWGTNANAVSGSKVFIGYDGSTDPRTYGTARAQTNI ATGLTNYCKGTNTCKVVCHSAGCYAIEYWLANLGDTITSKGFNITKVTALAAASGGSELANLVGGSGNAMDRSLVVTTAR GAYNHNLTASVLVNHVPGYKTRFGSSFILPGADDYAVAFHSSCGYNRAGGLDKCQTSFVSGQTTYTQYAGHVRAPSLTAA GLNKNHSEIMNEGTR
Sequences:
>Translated_255_residues MKMTINLILAMLFATSISAETFTVFIHGKSSKNHDGVGTTDVNSYWGTNANAVSGSKVFIGYDGSTDPRTYGTARAQTNI ATGLTNYCKGTNTCKVVCHSAGCYAIEYWLANLGDTITSKGFNITKVTALAAASGGSELANLVGGSGNAMDRSLVVTTAR GAYNHNLTASVLVNHVPGYKTRFGSSFILPGADDYAVAFHSSCGYNRAGGLDKCQTSFVSGQTTYTQYAGHVRAPSLTAA GLNKNHSEIMNEGTR >Mature_255_residues MKMTINLILAMLFATSISAETFTVFIHGKSSKNHDGVGTTDVNSYWGTNANAVSGSKVFIGYDGSTDPRTYGTARAQTNI ATGLTNYCKGTNTCKVVCHSAGCYAIEYWLANLGDTITSKGFNITKVTALAAASGGSELANLVGGSGNAMDRSLVVTTAR GAYNHNLTASVLVNHVPGYKTRFGSSFILPGADDYAVAFHSSCGYNRAGGLDKCQTSFVSGQTTYTQYAGHVRAPSLTAA GLNKNHSEIMNEGTR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26775; Mature: 26775
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMTINLILAMLFATSISAETFTVFIHGKSSKNHDGVGTTDVNSYWGTNANAVSGSKVFI CEEHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE GYDGSTDPRTYGTARAQTNIATGLTNYCKGTNTCKVVCHSAGCYAIEYWLANLGDTITSK EECCCCCCCCCCCCHHHCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCHHHCC GFNITKVTALAAASGGSELANLVGGSGNAMDRSLVVTTARGAYNHNLTASVLVNHVPGYK CCCEEEEEEEECCCCCHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHHEECCCCCC TRFGSSFILPGADDYAVAFHSSCGYNRAGGLDKCQTSFVSGQTTYTQYAGHVRAPSLTAA CCCCCEEECCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCHHHHCCCCCCCCEEEC GLNKNHSEIMNEGTR CCCCCHHHHHHCCCC >Mature Secondary Structure MKMTINLILAMLFATSISAETFTVFIHGKSSKNHDGVGTTDVNSYWGTNANAVSGSKVFI CEEHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEE GYDGSTDPRTYGTARAQTNIATGLTNYCKGTNTCKVVCHSAGCYAIEYWLANLGDTITSK EECCCCCCCCCCCCHHHCHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHCCHHHCC GFNITKVTALAAASGGSELANLVGGSGNAMDRSLVVTTARGAYNHNLTASVLVNHVPGYK CCCEEEEEEEECCCCCHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHHEECCCCCC TRFGSSFILPGADDYAVAFHSSCGYNRAGGLDKCQTSFVSGQTTYTQYAGHVRAPSLTAA CCCCCEEECCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCHHHHCCCCCCCCEEEC GLNKNHSEIMNEGTR CCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA