| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221881
Identifier: 183221881
GI number: 183221881
Start: 2599066
End: 2601003
Strand: Reverse
Name: 183221881
Synonym: LEPBI_I2516
Alternate gene names: NA
Gene position: 2601003-2599066 (Counterclockwise)
Preceding gene: 183221883
Following gene: 183221880
Centisome position: 72.26
GC content: 31.22
Gene sequence:
>1938_bases ATGAATCATAACCTGCTCTTAAGAAGGATTTCCCGTAGTGCATTAAGCCACGTTTCGGCTGCAATTGTCATACTAACAAT CTTTTCGTGTAACAATGAATCAACTATCAATAGTATATTGAAAGTAAAAAATGGAAAATTAATTCTGCCTGAAACTTTCG TCTTAAACCAAACTTCCATTAAGCTCGATGGAGAATGGGATTTTTATTACCAAAAATTTCTAAGTTCAGGTGATTTTAGA ACTTCGAATTCACAAATTGAAAGAGGAATCGTTTCAATTCCTGGGTTTTGGAATGAGATCAAATATGAGGAGAAGGAGTA TGATGCAAAAAGTTATGGCACTTTTCGGATGCTCTTAACTCTTCCAAATCATTTAGTCAATCAAAAACTATCTTTTTATA TTCCCCATTCGTTTACAACTTATAGAATGTTCTTAAATGGCTCAGTGATCTCAGAAAATGGAATTGTTGGAACTAATGAA GAAAATACGAAAGAGTATTGGTTACCAAAAATTGTATTTTTCACACCTACTGCCAAAACGATTGAAATCATCATCCATGT TGCAAACTTTAAATCCTTAAATGCAGGTTTTCGCCAAAGTATAGAGTTTGGAACCGAAGAAACGATGCTCCGTACAAAAC AAACACGTGTTGCATTGGATATTTTTTTGATTGCGAGTTTGTTTGTTATTTCTTTATACCATTTTACTCTTTTTCTTTTG CGGAAAAAAGATCTAAGTCTTCTTTATTTCTCTCTCTATTCTTTTTCTAGTATGATTTACCAATTTACGAGTGGTGAATT TTTTTTAATGATTTTGTTTCCTGATTTCGAATGGAGATGGTTAATTAAGATTTTTTTTATTTCAATTTATTTAACTTTTC CATTTTTACTTAGTTTTATAGGAAAAGTTTTCACCAATGAAATCAATAAAATTCCTTTAAATCTATTCCAATTTATTTTT TTTAGTTTCTCAGTTTTTGTGTTATTTTCGGAATCAACATGGATAGAAAAAACACTTTTGCCGGCTGAAATTTCTATGTT ATTTTGTTGTATTTATATTTTTTGGATCTTATTCAAAGCAGTGATTCATAAAAGAGAAAGTGCATCAGGGTTTTTGTTTG GATTCCTTTTTTTATTTCTTACGATACTAAACGATATACTATTCGAAAAAAATATTATTAAAACTGAAGTATATGCGCCT ATCGGGAATTTTGTATTGTTCTTTTCGCAATCTTTTTTCCTTTCGAAAAACCATTCAAAACTACATGTTACAATCGAAAA ACAAAAGTTAGAACTTGAGCAATCAGTACTATTAAAAGATAAAATTTATCATGCAAATATTCAATCCAAGAGGATGGAAT TAGAGTTATACAAAAAAACGATCCAACCTCATTTTCTTATGAATTCACTTTCGGCGATTCGGTATTGGGTTTCCGAAAGT CCGCAAAAATCGGAACAAATTTTAGATTCCCTTGTAGGAGAACTTCATATTATCTTAAAAGTTGCTTCTAAACAACTGAT TCCAATTGGTGATGAAATCGCATTATGCAAATACCATATAGGAGTCATGAAAATGCGAATGGAAAAAGATTATCGATTTA AAACAATTGGGATCAATCCAACGGAAGTAATTCCTCCGCTAATTTTCCATACGCTCATAGAAAATGCGTTTACTCATGAG GATTCCATAAAAGCAAGGTTAAGCTTTGTAATCCTCAAAAAAAACGTCAAAAAAGATGGGAATTTATTCTCGGTTTATTG TTTTATTGTATATAACCATTGTAAGGTCGAAAAAGAGAACGTTGTGAGACATGGATCAGGTACTGGATTAGAATATGTAA GACTTCGGTTAGAGGAATCTTATTCTGGCAAGTGGTCTTTGCTACATGGAAAATCTAAAAAAGGATATCGGGTTATCATT CAAATCCAAACTCTATAA
Upstream 100 bases:
>100_bases GAATACTGAATACTGAATTCTAATTCAAATTGAGGAACCTGTCTTCCTAGGACGGGAATCCGGAGTTAGTTTTCCGTTTT TATATTTTTATGGAAGATAA
Downstream 100 bases:
>100_bases AATGAAAATTTTAATATTAGAAGATGAGCCAGTTCACGCAAAATTTCTTACGAAATTATTAAATATAGTTTTGGAATCTT CAATAAAAGAAATCAAACAT
Product: putative signal peptide
Products: NA
Alternate protein names: Signal Transduction Histidine Kinase LytS; Sensor Histidine Kinase; Histidine Kinase; Two-Component System Sensor Histidine Kinase; Two-Component Hybrid Sensor And Regulator; Adenylate/Guanylate Cyclase; Sensor Protein; 7TM Domain Sensor Diguanylate Cyclase; Adenylate Cyclase; Serine Phosphatase RsbU; C-Terminal ATPase Domain Signal Transduction-Like Protein; Two-Component Response Regulator; Sensor Diguanylate Cyclase; Signal Peptide; Two-Component Sensor Histidine Kinase; Phosphoserine Phosphatase; Regulatory Protein; Response Regulator Receiver; Adenylate Or Guanylate Cyclase; Periplasmic Sensor Signal Transduction Histidine Kinase; Two-Component Sensor; Histidine Kinase Sensor Protein; Protein Phosphatase; Serine Phosphatase RsbU Regulator Of Sigma Subunit; Signal Transduction Histidine Kinase; Adenylate Cyclase Family Protein; Response Regulator Receiver Protein; Two-Component System Sensor Protein; ATPase Histidine Kinase- DNA Gyrase B- And
Number of amino acids: Translated: 645; Mature: 645
Protein sequence:
>645_residues MNHNLLLRRISRSALSHVSAAIVILTIFSCNNESTINSILKVKNGKLILPETFVLNQTSIKLDGEWDFYYQKFLSSGDFR TSNSQIERGIVSIPGFWNEIKYEEKEYDAKSYGTFRMLLTLPNHLVNQKLSFYIPHSFTTYRMFLNGSVISENGIVGTNE ENTKEYWLPKIVFFTPTAKTIEIIIHVANFKSLNAGFRQSIEFGTEETMLRTKQTRVALDIFLIASLFVISLYHFTLFLL RKKDLSLLYFSLYSFSSMIYQFTSGEFFLMILFPDFEWRWLIKIFFISIYLTFPFLLSFIGKVFTNEINKIPLNLFQFIF FSFSVFVLFSESTWIEKTLLPAEISMLFCCIYIFWILFKAVIHKRESASGFLFGFLFLFLTILNDILFEKNIIKTEVYAP IGNFVLFFSQSFFLSKNHSKLHVTIEKQKLELEQSVLLKDKIYHANIQSKRMELELYKKTIQPHFLMNSLSAIRYWVSES PQKSEQILDSLVGELHIILKVASKQLIPIGDEIALCKYHIGVMKMRMEKDYRFKTIGINPTEVIPPLIFHTLIENAFTHE DSIKARLSFVILKKNVKKDGNLFSVYCFIVYNHCKVEKENVVRHGSGTGLEYVRLRLEESYSGKWSLLHGKSKKGYRVII QIQTL
Sequences:
>Translated_645_residues MNHNLLLRRISRSALSHVSAAIVILTIFSCNNESTINSILKVKNGKLILPETFVLNQTSIKLDGEWDFYYQKFLSSGDFR TSNSQIERGIVSIPGFWNEIKYEEKEYDAKSYGTFRMLLTLPNHLVNQKLSFYIPHSFTTYRMFLNGSVISENGIVGTNE ENTKEYWLPKIVFFTPTAKTIEIIIHVANFKSLNAGFRQSIEFGTEETMLRTKQTRVALDIFLIASLFVISLYHFTLFLL RKKDLSLLYFSLYSFSSMIYQFTSGEFFLMILFPDFEWRWLIKIFFISIYLTFPFLLSFIGKVFTNEINKIPLNLFQFIF FSFSVFVLFSESTWIEKTLLPAEISMLFCCIYIFWILFKAVIHKRESASGFLFGFLFLFLTILNDILFEKNIIKTEVYAP IGNFVLFFSQSFFLSKNHSKLHVTIEKQKLELEQSVLLKDKIYHANIQSKRMELELYKKTIQPHFLMNSLSAIRYWVSES PQKSEQILDSLVGELHIILKVASKQLIPIGDEIALCKYHIGVMKMRMEKDYRFKTIGINPTEVIPPLIFHTLIENAFTHE DSIKARLSFVILKKNVKKDGNLFSVYCFIVYNHCKVEKENVVRHGSGTGLEYVRLRLEESYSGKWSLLHGKSKKGYRVII QIQTL >Mature_645_residues MNHNLLLRRISRSALSHVSAAIVILTIFSCNNESTINSILKVKNGKLILPETFVLNQTSIKLDGEWDFYYQKFLSSGDFR TSNSQIERGIVSIPGFWNEIKYEEKEYDAKSYGTFRMLLTLPNHLVNQKLSFYIPHSFTTYRMFLNGSVISENGIVGTNE ENTKEYWLPKIVFFTPTAKTIEIIIHVANFKSLNAGFRQSIEFGTEETMLRTKQTRVALDIFLIASLFVISLYHFTLFLL RKKDLSLLYFSLYSFSSMIYQFTSGEFFLMILFPDFEWRWLIKIFFISIYLTFPFLLSFIGKVFTNEINKIPLNLFQFIF FSFSVFVLFSESTWIEKTLLPAEISMLFCCIYIFWILFKAVIHKRESASGFLFGFLFLFLTILNDILFEKNIIKTEVYAP IGNFVLFFSQSFFLSKNHSKLHVTIEKQKLELEQSVLLKDKIYHANIQSKRMELELYKKTIQPHFLMNSLSAIRYWVSES PQKSEQILDSLVGELHIILKVASKQLIPIGDEIALCKYHIGVMKMRMEKDYRFKTIGINPTEVIPPLIFHTLIENAFTHE DSIKARLSFVILKKNVKKDGNLFSVYCFIVYNHCKVEKENVVRHGSGTGLEYVRLRLEESYSGKWSLLHGKSKKGYRVII QIQTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 75282; Mature: 75282
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNHNLLLRRISRSALSHVSAAIVILTIFSCNNESTINSILKVKNGKLILPETFVLNQTSI CCCHHHHHHHHHHHHHHHHHHEEEEEEEECCCCHHHHHHHHCCCCCEECCCEEEEECEEE KLDGEWDFYYQKFLSSGDFRTSNSQIERGIVSIPGFWNEIKYEEKEYDAKSYGTFRMLLT EECCCHHHHHHHHHCCCCCCCCCHHHHCCCEECCCCHHHCCCCHHHCCCCCCCCEEEEEH LPNHLVNQKLSFYIPHSFTTYRMFLNGSVISENGIVGTNEENTKEYWLPKIVFFTPTAKT HHHHHHCCCEEEEECCCCEEEEEEEECCEEECCCEECCCCCCCHHHCCCEEEEECCCCCE IEIIIHVANFKSLNAGFRQSIEFGTEETMLRTKQTRVALDIFLIASLFVISLYHFTLFLL EEEEEEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RKKDLSLLYFSLYSFSSMIYQFTSGEFFLMILFPDFEWRWLIKIFFISIYLTFPFLLSFI HHCCHHHHHHHHHHHHHHHHEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH GKVFTNEINKIPLNLFQFIFFSFSVFVLFSESTWIEKTLLPAEISMLFCCIYIFWILFKA HHHHHCCCCCCHHHHHHHHHHHHHEEEEEECCCHHHHHCCHHHHHHHHHHHHHHHHHHHH VIHKRESASGFLFGFLFLFLTILNDILFEKNIIKTEVYAPIGNFVLFFSQSFFLSKNHSK HHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHCCHHEEECCCCE LHVTIEKQKLELEQSVLLKDKIYHANIQSKRMELELYKKTIQPHFLMNSLSAIRYWVSES EEEEEEHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC PQKSEQILDSLVGELHIILKVASKQLIPIGDEIALCKYHIGVMKMRMEKDYRFKTIGINP CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHCCCCEEEEECCCH TEVIPPLIFHTLIENAFTHEDSIKARLSFVILKKNVKKDGNLFSVYCFIVYNHCKVEKEN HHHHHHHHHHHHHHHHCCCCHHHHHHHEEEEEECCCCCCCCEEEEEEEEEECCCCCCHHH VVRHGSGTGLEYVRLRLEESYSGKWSLLHGKSKKGYRVIIQIQTL HEECCCCCCHHHEEEEEECCCCCCEEEEECCCCCCCEEEEEEEEC >Mature Secondary Structure MNHNLLLRRISRSALSHVSAAIVILTIFSCNNESTINSILKVKNGKLILPETFVLNQTSI CCCHHHHHHHHHHHHHHHHHHEEEEEEEECCCCHHHHHHHHCCCCCEECCCEEEEECEEE KLDGEWDFYYQKFLSSGDFRTSNSQIERGIVSIPGFWNEIKYEEKEYDAKSYGTFRMLLT EECCCHHHHHHHHHCCCCCCCCCHHHHCCCEECCCCHHHCCCCHHHCCCCCCCCEEEEEH LPNHLVNQKLSFYIPHSFTTYRMFLNGSVISENGIVGTNEENTKEYWLPKIVFFTPTAKT HHHHHHCCCEEEEECCCCEEEEEEEECCEEECCCEECCCCCCCHHHCCCEEEEECCCCCE IEIIIHVANFKSLNAGFRQSIEFGTEETMLRTKQTRVALDIFLIASLFVISLYHFTLFLL EEEEEEEECCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RKKDLSLLYFSLYSFSSMIYQFTSGEFFLMILFPDFEWRWLIKIFFISIYLTFPFLLSFI HHCCHHHHHHHHHHHHHHHHEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH GKVFTNEINKIPLNLFQFIFFSFSVFVLFSESTWIEKTLLPAEISMLFCCIYIFWILFKA HHHHHCCCCCCHHHHHHHHHHHHHEEEEEECCCHHHHHCCHHHHHHHHHHHHHHHHHHHH VIHKRESASGFLFGFLFLFLTILNDILFEKNIIKTEVYAPIGNFVLFFSQSFFLSKNHSK HHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHCCHHEEECCCCE LHVTIEKQKLELEQSVLLKDKIYHANIQSKRMELELYKKTIQPHFLMNSLSAIRYWVSES EEEEEEHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC PQKSEQILDSLVGELHIILKVASKQLIPIGDEIALCKYHIGVMKMRMEKDYRFKTIGINP CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHHCCCCEEEEECCCH TEVIPPLIFHTLIENAFTHEDSIKARLSFVILKKNVKKDGNLFSVYCFIVYNHCKVEKEN HHHHHHHHHHHHHHHHCCCCHHHHHHHEEEEEECCCCCCCCEEEEEEEEEECCCCCCHHH VVRHGSGTGLEYVRLRLEESYSGKWSLLHGKSKKGYRVIIQIQTL HEECCCCCCHHHEEEEEECCCCCCEEEEECCCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA