| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221841
Identifier: 183221841
GI number: 183221841
Start: 2554506
End: 2555318
Strand: Reverse
Name: 183221841
Synonym: LEPBI_I2472
Alternate gene names: NA
Gene position: 2555318-2554506 (Counterclockwise)
Preceding gene: 183221843
Following gene: 183221840
Centisome position: 70.99
GC content: 36.41
Gene sequence:
>813_bases TTGCAAGACCATACAACACAGGAAGAAATCCAATGGTTGGATTCCATACCGAAAACGGATTCCTTGGCCCTCATGACATC CTTTGTCAAAACACCTAGGTTTATCCAAAAAACCACAATCCAAAAAACCTCACAAAATTTGATTCCGGAGATTCCTGGTT TCCAAGTGGAACATTGGAATTTAGTTCGTTTAAGTCGTGTTTGGTTACTAACTTTTGTTTCCGATTTTCCCAAAGACCAA TGCATCCAAACGATTGAAACTTTGTTTGACACTGCGGAATTAAATGAGTTGGTTGCTTTATTTTCTGCCCTACCATTGCT TCCCTTTCCTGAAGTTTGGTTACCGAAGGCAACCGACGCAGTTCGTTCCAATATGGGGTTTGTTTTTGATGCGATCGCGA TTCAAAACCCATTTCCTTTCCAATATTTTTCTGAGTTAGCTTGGAACCAATTGGTTTTAAAAACGATTTTTAACGCCAAA CCAATCGAATTGATTTACGGTTTAATAGAAAGAAAAAATCTAAATTTAGCTTTCAGTACCATCGATTTTGTCAAAGAAAG ATGGGCTGCAGGAAGAGACGTTCCTGCCAATGTATGGCAATTGGTATCTCTGTATGTTTCAGAATCAGAAATCAGTTTGA TCGAAAGACTTTTTTTATCCGAAAAAGAGGAAGATCAAATTGCGGCTTCTTTGATTTGTTCCGAATCAAATTGGAACAGT TTTCAATCTTTGTTCATAAAATATCCAAAATACAAAGAAGAAATTCAAAAAAGAAAATGGGATTGGTCTAAACTAAGTAT CGTTTTTAAGTAA
Upstream 100 bases:
>100_bases AAATCGGGCGATTAATTGGTTTACTTGGACTTTGATCAGAAAAATGATTTCAATTGTCGCCTCTATGTTTCCTTCGTATT CTTCCATTCTTTATCAGGTA
Downstream 100 bases:
>100_bases TTTTTATGTGCGAAAACAATCACCAAACATCGAATCATCCTTCCCACTTTGAAAACCAAAATGATTCCAATGAAATTCCA ACTCATGTGGAATTAAAATG
Product: putative signal peptide
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MQDHTTQEEIQWLDSIPKTDSLALMTSFVKTPRFIQKTTIQKTSQNLIPEIPGFQVEHWNLVRLSRVWLLTFVSDFPKDQ CIQTIETLFDTAELNELVALFSALPLLPFPEVWLPKATDAVRSNMGFVFDAIAIQNPFPFQYFSELAWNQLVLKTIFNAK PIELIYGLIERKNLNLAFSTIDFVKERWAAGRDVPANVWQLVSLYVSESEISLIERLFLSEKEEDQIAASLICSESNWNS FQSLFIKYPKYKEEIQKRKWDWSKLSIVFK
Sequences:
>Translated_270_residues MQDHTTQEEIQWLDSIPKTDSLALMTSFVKTPRFIQKTTIQKTSQNLIPEIPGFQVEHWNLVRLSRVWLLTFVSDFPKDQ CIQTIETLFDTAELNELVALFSALPLLPFPEVWLPKATDAVRSNMGFVFDAIAIQNPFPFQYFSELAWNQLVLKTIFNAK PIELIYGLIERKNLNLAFSTIDFVKERWAAGRDVPANVWQLVSLYVSESEISLIERLFLSEKEEDQIAASLICSESNWNS FQSLFIKYPKYKEEIQKRKWDWSKLSIVFK >Mature_270_residues MQDHTTQEEIQWLDSIPKTDSLALMTSFVKTPRFIQKTTIQKTSQNLIPEIPGFQVEHWNLVRLSRVWLLTFVSDFPKDQ CIQTIETLFDTAELNELVALFSALPLLPFPEVWLPKATDAVRSNMGFVFDAIAIQNPFPFQYFSELAWNQLVLKTIFNAK PIELIYGLIERKNLNLAFSTIDFVKERWAAGRDVPANVWQLVSLYVSESEISLIERLFLSEKEEDQIAASLICSESNWNS FQSLFIKYPKYKEEIQKRKWDWSKLSIVFK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31480; Mature: 31480
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDHTTQEEIQWLDSIPKTDSLALMTSFVKTPRFIQKTTIQKTSQNLIPEIPGFQVEHWN CCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEECCCH LVRLSRVWLLTFVSDFPKDQCIQTIETLFDTAELNELVALFSALPLLPFPEVWLPKATDA HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH VRSNMGFVFDAIAIQNPFPFQYFSELAWNQLVLKTIFNAKPIELIYGLIERKNLNLAFST HHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHH IDFVKERWAAGRDVPANVWQLVSLYVSESEISLIERLFLSEKEEDQIAASLICSESNWNS HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHH FQSLFIKYPKYKEEIQKRKWDWSKLSIVFK HHHHHHHCCHHHHHHHHHCCCCHHEEEEEC >Mature Secondary Structure MQDHTTQEEIQWLDSIPKTDSLALMTSFVKTPRFIQKTTIQKTSQNLIPEIPGFQVEHWN CCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEECCCH LVRLSRVWLLTFVSDFPKDQCIQTIETLFDTAELNELVALFSALPLLPFPEVWLPKATDA HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHH VRSNMGFVFDAIAIQNPFPFQYFSELAWNQLVLKTIFNAKPIELIYGLIERKNLNLAFST HHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHH IDFVKERWAAGRDVPANVWQLVSLYVSESEISLIERLFLSEKEEDQIAASLICSESNWNS HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHH FQSLFIKYPKYKEEIQKRKWDWSKLSIVFK HHHHHHHCCHHHHHHHHHCCCCHHEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA