Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183221802
Identifier: 183221802
GI number: 183221802
Start: 2506765
End: 2507229
Strand: Reverse
Name: 183221802
Synonym: LEPBI_I2433
Alternate gene names: NA
Gene position: 2507229-2506765 (Counterclockwise)
Preceding gene: 183221805
Following gene: 183221799
Centisome position: 69.65
GC content: 42.15
Gene sequence:
>465_bases TTGGAACCAAACGAAATTTACACTCCACCTGGCGGTCCTCCCGCCTCAAATCCGAATATCAAACTTCTCTACCAGAAATG GGGTGAAGCGAACATTCGAAAATTGGTCTCTGATTTTTATGACCTGATCCAAGTCTCCGAAATTCGTTGGATGTTCCAAG GGGACTTTGAGTTAGCAAAGGAAAAACAAGCAGACTTTATGATACAGGTATTAGGTGGTCCCAATCGATACATTGAAAAA TGGGGCCCAGCAAGAATGCGGATGCGTCACTTCGCATTTCCTATTTCAGAAAAAGAACGTTCGATTTGGTTCTTATGTTA CGATGAAGCCCTGCAAGGTTTTGATTTTGATCATGATGATAAAATCGACTTTCTCTACTTTTTAGATGGGTTTAGCGGAT GGATGGTCAATCGAAAGGAACCGCCATGGGAAAAATACCCTGAAGATTCAGAATCGAATCGCTGA
Upstream 100 bases:
>100_bases CCCTTGCAAACAAGGGCCGGGCCAGTCCGGGCTCCGCCTCCGGCTCCGGTCGAAAAATCGACTTCCCCTTCCTGTCCCTT TCGCAATCCTGGAACGTGAT
Downstream 100 bases:
>100_bases AGTTTTGCCAGAACTGTAATTATGCTTAAGGTGTAAATTGACTGTGGCAGAAAATGAGTTAATGGCTCCTTCATTTTCTC TACGAGGAATTTTTTTGAGA
Product: putative globin
Products: NA
Alternate protein names: Hemoglobin-Like Protein; Bacterial Globin-Like Protein; Protozoan/Cyanobacterial Globin Family Protein
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MEPNEIYTPPGGPPASNPNIKLLYQKWGEANIRKLVSDFYDLIQVSEIRWMFQGDFELAKEKQADFMIQVLGGPNRYIEK WGPARMRMRHFAFPISEKERSIWFLCYDEALQGFDFDHDDKIDFLYFLDGFSGWMVNRKEPPWEKYPEDSESNR
Sequences:
>Translated_154_residues MEPNEIYTPPGGPPASNPNIKLLYQKWGEANIRKLVSDFYDLIQVSEIRWMFQGDFELAKEKQADFMIQVLGGPNRYIEK WGPARMRMRHFAFPISEKERSIWFLCYDEALQGFDFDHDDKIDFLYFLDGFSGWMVNRKEPPWEKYPEDSESNR >Mature_154_residues MEPNEIYTPPGGPPASNPNIKLLYQKWGEANIRKLVSDFYDLIQVSEIRWMFQGDFELAKEKQADFMIQVLGGPNRYIEK WGPARMRMRHFAFPISEKERSIWFLCYDEALQGFDFDHDDKIDFLYFLDGFSGWMVNRKEPPWEKYPEDSESNR
Specific function: Unknown
COG id: COG2346
COG function: function code R; Truncated hemoglobins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18343; Mature: 18343
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPNEIYTPPGGPPASNPNIKLLYQKWGEANIRKLVSDFYDLIQVSEIRWMFQGDFELAK CCCCCEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHEEECCCHHHHH EKQADFMIQVLGGPNRYIEKWGPARMRMRHFAFPISEKERSIWFLCYDEALQGFDFDHDD HCCCCEEEEECCCCHHHHHCCCHHHHHHHHHCCCCCCCCCEEEEEEEHHHHCCCCCCCCC KIDFLYFLDGFSGWMVNRKEPPWEKYPEDSESNR CEEEEEEECCCCCCEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure MEPNEIYTPPGGPPASNPNIKLLYQKWGEANIRKLVSDFYDLIQVSEIRWMFQGDFELAK CCCCCEECCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHEEECCCHHHHH EKQADFMIQVLGGPNRYIEKWGPARMRMRHFAFPISEKERSIWFLCYDEALQGFDFDHDD HCCCCEEEEECCCCHHHHHCCCHHHHHHHHHCCCCCCCCCEEEEEEEHHHHCCCCCCCCC KIDFLYFLDGFSGWMVNRKEPPWEKYPEDSESNR CEEEEEEECCCCCCEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA