| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221618
Identifier: 183221618
GI number: 183221618
Start: 2319352
End: 2320029
Strand: Direct
Name: 183221618
Synonym: LEPBI_I2242
Alternate gene names: NA
Gene position: 2319352-2320029 (Clockwise)
Preceding gene: 183221617
Following gene: 183221619
Centisome position: 64.43
GC content: 27.73
Gene sequence:
>678_bases ATGCTTCTTGAGAATCACAAAAAAATAACTGAAAAAGATTTAGAATCTGCAAACTTAATATGGAATTTTCTTTCTATTCG GGATACGATTCAAAAATCAGATCTAATAATTGTCTTGTGTAGTCATGATTTGAGAATTGCGAAATATGCTGTTGATCTTT ATAAACAAGGTTTAGCCAAATATATACTCTTTTCAGGTGGTTTAAATTTCTTTACCAAACATATTTTTCCTAATTCAGAA GCTGAAGCTTTTGCAAATTTAGCAATCTCTGAAAATATTCCAAAAGAATTTATAATTATAGAAAATAAATCCTCCAATAC AGGGGAAAATATTCAATTTTCTAAACAACTTCTTTATTCTTTGAATCTAAAATTCGAAAATATCATCGCTATCCAGAAAC CTTCAATGACTTTAAGAATTAAGCTTGCATTAGATAAACAGTGGCCTGATGGAAATTTTTCTATTGCTTCACCAAACTAT AGTCTTTTTGATGCTACGCATTCACATATTAACCTTTTTATGATTATTAATGAAATCGTTGGTGATCTACAAAGGATCAT TGAATATCCGAAATTAGGTTTTCAATCTGATACGATTATTCCAGATAAAATAATTTTAGCTTACAGTCAATTAATTGAAA ATGGCTATAATTTACATTTAAACAAATCAAGTTTTTGA
Upstream 100 bases:
>100_bases CCTTGCGTTCGCAAGCTACATGCCAGTCCCTAACGTCCCGTCCGGGACTCAGGGTCGGACAACTTCGGTAAGTCTAGTTC GTTAAGCGCAATTACTTAAA
Downstream 100 bases:
>100_bases ATTTTGAATTTATGTTAATATAAAAGATATTCTGCTAACCTTCATTTTTTTAAAAAAAATTTCTTAATCCGAAAAAACGA AGAGTTGAAAAACTAAAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 225; Mature: 225
Protein sequence:
>225_residues MLLENHKKITEKDLESANLIWNFLSIRDTIQKSDLIIVLCSHDLRIAKYAVDLYKQGLAKYILFSGGLNFFTKHIFPNSE AEAFANLAISENIPKEFIIIENKSSNTGENIQFSKQLLYSLNLKFENIIAIQKPSMTLRIKLALDKQWPDGNFSIASPNY SLFDATHSHINLFMIINEIVGDLQRIIEYPKLGFQSDTIIPDKIILAYSQLIENGYNLHLNKSSF
Sequences:
>Translated_225_residues MLLENHKKITEKDLESANLIWNFLSIRDTIQKSDLIIVLCSHDLRIAKYAVDLYKQGLAKYILFSGGLNFFTKHIFPNSE AEAFANLAISENIPKEFIIIENKSSNTGENIQFSKQLLYSLNLKFENIIAIQKPSMTLRIKLALDKQWPDGNFSIASPNY SLFDATHSHINLFMIINEIVGDLQRIIEYPKLGFQSDTIIPDKIILAYSQLIENGYNLHLNKSSF >Mature_225_residues MLLENHKKITEKDLESANLIWNFLSIRDTIQKSDLIIVLCSHDLRIAKYAVDLYKQGLAKYILFSGGLNFFTKHIFPNSE AEAFANLAISENIPKEFIIIENKSSNTGENIQFSKQLLYSLNLKFENIIAIQKPSMTLRIKLALDKQWPDGNFSIASPNY SLFDATHSHINLFMIINEIVGDLQRIIEYPKLGFQSDTIIPDKIILAYSQLIENGYNLHLNKSSF
Specific function: The imp locus inhibits the extrachromosomal maintenance of the streptomyces plasmid SLP1. May function as a transcriptional activator [H]
COG id: COG1434
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To E.coli ydcF [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003848 - InterPro: IPR014729 [H]
Pfam domain/function: PF02698 DUF218 [H]
EC number: NA
Molecular weight: Translated: 25757; Mature: 25757
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLENHKKITEKDLESANLIWNFLSIRDTIQKSDLIIVLCSHDLRIAKYAVDLYKQGLAK CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHH YILFSGGLNFFTKHIFPNSEAEAFANLAISENIPKEFIIIENKSSNTGENIQFSKQLLYS HHHHCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHH LNLKFENIIAIQKPSMTLRIKLALDKQWPDGNFSIASPNYSLFDATHSHINLFMIINEIV HCCCEEEEEEEECCCEEEEEEEEEECCCCCCCEEEECCCCEEEECCHHHEEHHHHHHHHH GDLQRIIEYPKLGFQSDTIIPDKIILAYSQLIENGYNLHLNKSSF HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCC >Mature Secondary Structure MLLENHKKITEKDLESANLIWNFLSIRDTIQKSDLIIVLCSHDLRIAKYAVDLYKQGLAK CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHH YILFSGGLNFFTKHIFPNSEAEAFANLAISENIPKEFIIIENKSSNTGENIQFSKQLLYS HHHHCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHH LNLKFENIIAIQKPSMTLRIKLALDKQWPDGNFSIASPNYSLFDATHSHINLFMIINEIV HCCCEEEEEEEECCCEEEEEEEEEECCCCCCCEEEECCCCEEEECCHHHEEHHHHHHHHH GDLQRIIEYPKLGFQSDTIIPDKIILAYSQLIENGYNLHLNKSSF HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2770697; 12000953 [H]