| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221580
Identifier: 183221580
GI number: 183221580
Start: 2285647
End: 2286231
Strand: Direct
Name: 183221580
Synonym: LEPBI_I2201
Alternate gene names: NA
Gene position: 2285647-2286231 (Clockwise)
Preceding gene: 183221579
Following gene: 183221581
Centisome position: 63.5
GC content: 26.67
Gene sequence:
>585_bases ATGATTAAGAAAATAACTATAATATTCGTTGGATTGATGATTCAATCTTGTCTAAGCCAAAAATCATCACTTTTAAATCA GAATTTGAAACCTTCAGATGTAGAACAGAAGGAAGTAAATATCTATATAAGAAAGATCGAGATAGTTAATGAAATTGGGG ATTTGAAAAAAATCCAGGAAGAAACATTAAAGACAAATATTAAAATTCTCCTTGAAAATACAAATATCTTCAAATCTGTT AACTATTATTCTGAATTTCCAGTTCCCAGCAATTCGATTCTTTTAGATTTTAAATTTCTAAAATATGAAAATACATTAAA ACTAGACCCACTATATATTCCACTTTCAATTGCCACTTTAACTTTATATATCTGGCTTGGAGGTTCTATTGTAAATTTCG ATTCAAAAATACAGTTAGAAGTTAATTCTTTTGATAATAATAGAAAATTAATTAAATCCCAAGTATTTGAAGAGGATAAT TTCATAAGAGAATATATATACGATCCATGGAGATCTCGACGAATAATCCCAGAGAAAAAAACAAAATTCATTTTGAATTC AGTAATTCAGGTCACTAATTCATGA
Upstream 100 bases:
>100_bases TCCGTGCCAGTCCCTAACGTCCCGTTCCGGGACTCAGGGTCGGGAAACGTCGTCTCCCCTAGTTCGTTATACGACATTTT TAAAAATTAAATAAGAAAAT
Downstream 100 bases:
>100_bases ATTTTATATCAATCATCGCCTTATTGTTTTTTATAACAAATTGTTCAACTATCAGCTATGAAAATAGTCCTAAATTATCC AACAATTTAAATAAATCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MIKKITIIFVGLMIQSCLSQKSSLLNQNLKPSDVEQKEVNIYIRKIEIVNEIGDLKKIQEETLKTNIKILLENTNIFKSV NYYSEFPVPSNSILLDFKFLKYENTLKLDPLYIPLSIATLTLYIWLGGSIVNFDSKIQLEVNSFDNNRKLIKSQVFEEDN FIREYIYDPWRSRRIIPEKKTKFILNSVIQVTNS
Sequences:
>Translated_194_residues MIKKITIIFVGLMIQSCLSQKSSLLNQNLKPSDVEQKEVNIYIRKIEIVNEIGDLKKIQEETLKTNIKILLENTNIFKSV NYYSEFPVPSNSILLDFKFLKYENTLKLDPLYIPLSIATLTLYIWLGGSIVNFDSKIQLEVNSFDNNRKLIKSQVFEEDN FIREYIYDPWRSRRIIPEKKTKFILNSVIQVTNS >Mature_194_residues MIKKITIIFVGLMIQSCLSQKSSLLNQNLKPSDVEQKEVNIYIRKIEIVNEIGDLKKIQEETLKTNIKILLENTNIFKSV NYYSEFPVPSNSILLDFKFLKYENTLKLDPLYIPLSIATLTLYIWLGGSIVNFDSKIQLEVNSFDNNRKLIKSQVFEEDN FIREYIYDPWRSRRIIPEKKTKFILNSVIQVTNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22732; Mature: 22732
Theoretical pI: Translated: 9.43; Mature: 9.43
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKKITIIFVGLMIQSCLSQKSSLLNQNLKPSDVEQKEVNIYIRKIEIVNEIGDLKKIQE CCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHH ETLKTNIKILLENTNIFKSVNYYSEFPVPSNSILLDFKFLKYENTLKLDPLYIPLSIATL HHHHCCEEEEEECCCCEEECCCCCCCCCCCCCEEEEEEEEEECCCEEECCEEEHHHHHHH TLYIWLGGSIVNFDSKIQLEVNSFDNNRKLIKSQVFEEDNFIREYIYDPWRSRRIIPEKK HHHEEECCEEEECCCEEEEEEECCCCCHHHHHHHHHCCCHHHHHHHCCCHHCCCCCCCHH TKFILNSVIQVTNS HHHHHHHHHHHCCC >Mature Secondary Structure MIKKITIIFVGLMIQSCLSQKSSLLNQNLKPSDVEQKEVNIYIRKIEIVNEIGDLKKIQE CCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHHHH ETLKTNIKILLENTNIFKSVNYYSEFPVPSNSILLDFKFLKYENTLKLDPLYIPLSIATL HHHHCCEEEEEECCCCEEECCCCCCCCCCCCCEEEEEEEEEECCCEEECCEEEHHHHHHH TLYIWLGGSIVNFDSKIQLEVNSFDNNRKLIKSQVFEEDNFIREYIYDPWRSRRIIPEKK HHHEEECCEEEECCCEEEEEEECCCCCHHHHHHHHHCCCHHHHHHHCCCHHCCCCCCCHH TKFILNSVIQVTNS HHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA