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The map label for this gene is ygjM [C]

Identifier: 183221579

GI number: 183221579

Start: 2285033

End: 2285434

Strand: Direct

Name: ygjM [C]

Synonym: LEPBI_I2200

Alternate gene names: 183221579

Gene position: 2285033-2285434 (Clockwise)

Preceding gene: 183221578

Following gene: 183221580

Centisome position: 63.48

GC content: 29.35

Gene sequence:

>402_bases
ATGATTCTAGAAATTGAAAAAGTTAAGAATGTTTGGGATGATGTTAAAGATATTCTCTCTGTACCTCATACTGATAAACA
ATATAAAAAATTAGTTAAGGTTCTTGATGAACTAATTGATGAAGTTGGAAATAATGAAAAACATCAATTAGCTCCGCTTC
TTGAAACTGTAGGTAATTTGATTGAAGAATATGAAAATGATCATTTCATACAACCTAATGCTGAACCTATCCAAGTCTTA
AAGTTCCTTATGCAAGAAAATAGTTTAACTCAAAAAGATCTAAACATTTTAGGAAGCCAAGGTGTTGTTTCTGAAATCTT
AAATGAAAAAAGAGAATTAAATGTACGACAAATCAAAGCTCTTGCGGAAAAATTCAATGTTTCACCATCGGTATTCATTT
GA

Upstream 100 bases:

>100_bases
GATTGATTGCTGCTATTCATTTCAATAGGCAAAAAGTTTTTGTAAGAAACATTTTAACACATTCTGAATATGATAAAGGT
AAATGGAAAAGGGAAAATTT

Downstream 100 bases:

>100_bases
TCGTCTAGTTTGCGACTTCGTATAACAGCGGGGAAACGCTTCGCTTCGGCACTTACGGCCTCGCTCGGTCTGCGACACAT
TTCCCTTCTGTCACTCGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator XRE Family; HTH Domain-Containing Transcriptional Regulator; HTH-Type Transcriptional Regulator YgjM- Like; Transcription Regulator Containing HTH Domain; Transcriptional Regulator Xre Family; Transcription Regulator; Transcription Regulator With HTH Domain; HTH-Type Transcriptional Regulator YgjM-Like

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MILEIEKVKNVWDDVKDILSVPHTDKQYKKLVKVLDELIDEVGNNEKHQLAPLLETVGNLIEEYENDHFIQPNAEPIQVL
KFLMQENSLTQKDLNILGSQGVVSEILNEKRELNVRQIKALAEKFNVSPSVFI

Sequences:

>Translated_133_residues
MILEIEKVKNVWDDVKDILSVPHTDKQYKKLVKVLDELIDEVGNNEKHQLAPLLETVGNLIEEYENDHFIQPNAEPIQVL
KFLMQENSLTQKDLNILGSQGVVSEILNEKRELNVRQIKALAEKFNVSPSVFI
>Mature_133_residues
MILEIEKVKNVWDDVKDILSVPHTDKQYKKLVKVLDELIDEVGNNEKHQLAPLLETVGNLIEEYENDHFIQPNAEPIQVL
KFLMQENSLTQKDLNILGSQGVVSEILNEKRELNVRQIKALAEKFNVSPSVFI

Specific function: Unknown

COG id: COG5499

COG function: function code K; Predicted transcription regulator containing HTH domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15290; Mature: 15290

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILEIEKVKNVWDDVKDILSVPHTDKQYKKLVKVLDELIDEVGNNEKHQLAPLLETVGNL
CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
IEEYENDHFIQPNAEPIQVLKFLMQENSLTQKDLNILGSQGVVSEILNEKRELNVRQIKA
HHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHH
LAEKFNVSPSVFI
HHHHHCCCCCCCC
>Mature Secondary Structure
MILEIEKVKNVWDDVKDILSVPHTDKQYKKLVKVLDELIDEVGNNEKHQLAPLLETVGNL
CCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
IEEYENDHFIQPNAEPIQVLKFLMQENSLTQKDLNILGSQGVVSEILNEKRELNVRQIKA
HHHHCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHH
LAEKFNVSPSVFI
HHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA