Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183221552
Identifier: 183221552
GI number: 183221552
Start: 2259333
End: 2259941
Strand: Direct
Name: 183221552
Synonym: LEPBI_I2173
Alternate gene names: NA
Gene position: 2259333-2259941 (Clockwise)
Preceding gene: 183221551
Following gene: 183221553
Centisome position: 62.76
GC content: 31.69
Gene sequence:
>609_bases ATGGGAATTTTCTCAAATATATTTAAAAGCAATAAATCAAAATACAAAACGTATTTCGTAACTGCTCAACTAAATCATTT ATTAATGCCATTAGATAGAGGAGATATTTATGAAGATCCGCTCGATGAAGCTTTAAAAACAGTCAAGCTCGGAGAAGTTG ACGGTGGTGGCACTATGCAGAAAAAAACTGGCGAGATTGATTTCATCGATGTAGAAATAACTCTTTATAACCTGGAAGAA GGAATTCCGTTTCTTATTAAAAAATTAGAAGAACTTGGTGCTCCGAAATCTTCGATACTTCATATTCAAGACGAATCTAA CCCAAAACAGATTGAATTTGGTAAAAAAGAAGGGCTTGCCATTTATCTCGATGGAGTAAATTTACCGAAAGAAGTTTATG AAAATTCTGATATAAACGATTTAATTGAAAAATTGAATAACTGTATCATAAATATGGGTACTATGCAAAGCTATTGGCAA GGTGAAACAGAAACTGCTCTCTATTTCTATGGAGAAAATGCAGAAATGATAAAAAACAATTTTATGCCTATTATAGAAAA TTATCCTTTATGCAAAGGTTGTAGAATAGTTACGATCGCACCAAAATAA
Upstream 100 bases:
>100_bases GTCCCGGTCCGGGACTCAGGGTCAGCCTACGTCGGTTAGCCTAGTTCGTTATGCGTAATTGCCCAGATAAAATTTATAAT AGAAATTTTGGAGATTAAAA
Downstream 100 bases:
>100_bases CTTTATCGATCAAGTGGGCAACTACGCATAACAGCGACTTACCGCTACGCTTCGGCACAAGGCCTCGCTCGGCCTCCGGC AAATTCCCCTTCTGGCATTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 202; Mature: 201
Protein sequence:
>202_residues MGIFSNIFKSNKSKYKTYFVTAQLNHLLMPLDRGDIYEDPLDEALKTVKLGEVDGGGTMQKKTGEIDFIDVEITLYNLEE GIPFLIKKLEELGAPKSSILHIQDESNPKQIEFGKKEGLAIYLDGVNLPKEVYENSDINDLIEKLNNCIINMGTMQSYWQ GETETALYFYGENAEMIKNNFMPIIENYPLCKGCRIVTIAPK
Sequences:
>Translated_202_residues MGIFSNIFKSNKSKYKTYFVTAQLNHLLMPLDRGDIYEDPLDEALKTVKLGEVDGGGTMQKKTGEIDFIDVEITLYNLEE GIPFLIKKLEELGAPKSSILHIQDESNPKQIEFGKKEGLAIYLDGVNLPKEVYENSDINDLIEKLNNCIINMGTMQSYWQ GETETALYFYGENAEMIKNNFMPIIENYPLCKGCRIVTIAPK >Mature_201_residues GIFSNIFKSNKSKYKTYFVTAQLNHLLMPLDRGDIYEDPLDEALKTVKLGEVDGGGTMQKKTGEIDFIDVEITLYNLEEG IPFLIKKLEELGAPKSSILHIQDESNPKQIEFGKKEGLAIYLDGVNLPKEVYENSDINDLIEKLNNCIINMGTMQSYWQG ETETALYFYGENAEMIKNNFMPIIENYPLCKGCRIVTIAPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22918; Mature: 22786
Theoretical pI: Translated: 4.50; Mature: 4.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGIFSNIFKSNKSKYKTYFVTAQLNHLLMPLDRGDIYEDPLDEALKTVKLGEVDGGGTMQ CCHHHHHHHCCCCCEEEEEEEEECCEEEEECCCCCCCCCHHHHHHHHEECCCCCCCCCCC KKTGEIDFIDVEITLYNLEEGIPFLIKKLEELGAPKSSILHIQDESNPKQIEFGKKEGLA CCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHCCCHHHEEEEECCCCCCEEECCCCCCEE IYLDGVNLPKEVYENSDINDLIEKLNNCIINMGTMQSYWQGETETALYFYGENAEMIKNN EEEECCCCCHHHHCCCCHHHHHHHHHHHEEECCCCHHHHCCCCCEEEEEECCCHHHHHCC FMPIIENYPLCKGCRIVTIAPK CCCHHCCCCCCCCCEEEEECCC >Mature Secondary Structure GIFSNIFKSNKSKYKTYFVTAQLNHLLMPLDRGDIYEDPLDEALKTVKLGEVDGGGTMQ CHHHHHHHCCCCCEEEEEEEEECCEEEEECCCCCCCCCHHHHHHHHEECCCCCCCCCCC KKTGEIDFIDVEITLYNLEEGIPFLIKKLEELGAPKSSILHIQDESNPKQIEFGKKEGLA CCCCCEEEEEEEEEEEECCCCHHHHHHHHHHHCCCHHHEEEEECCCCCCEEECCCCCCEE IYLDGVNLPKEVYENSDINDLIEKLNNCIINMGTMQSYWQGETETALYFYGENAEMIKNN EEEECCCCCHHHHCCCCHHHHHHHHHHHEEECCCCHHHHCCCCCEEEEEECCCHHHHHCC FMPIIENYPLCKGCRIVTIAPK CCCHHCCCCCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA