Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183221553
Identifier: 183221553
GI number: 183221553
Start: 2260162
End: 2260995
Strand: Direct
Name: 183221553
Synonym: LEPBI_I2174
Alternate gene names: NA
Gene position: 2260162-2260995 (Clockwise)
Preceding gene: 183221552
Following gene: 183221554
Centisome position: 62.79
GC content: 24.82
Gene sequence:
>834_bases TTGGAATTTGAAATTTCACCAGTTAAACTTTCTCAATTAATTTTCTTAATATTACTAATTAATCAGTTTCAAGTAATTGG TGATTGGAATAAAATTAAGGAATTTTCGAAATTATTAATATTACTAAAATTATCAGATATTTTGATCAGTGCTTTCTTTG AAATATTAAACTTTTGGCCTTTTATATGGCATTTTGATCAAGGTTTTATCCATTCTCTTAATACTATCCTATTTACATGG AATGGATTTTCGCAATTTGAAAAAATCGGCCTTTGGAATGTCCTTTTTACATTCCCTAAATTCAATTTAATTTCGGATTT CTTAAGCATTATTCTTGCAATTAAATATTTTAAATTTAAAACACTGAATGATGATAAAATTAATCAAAATAAATTTATTT ATCCGATTTTTGTTTTTGGTTTGATCTTAAACTTTGGATTTATCATTTCAGATTACCAAATTTCTTCTAATTCATCAAAT GTAAATATTCCAATCTTAACTAAAGAAATTTTGCAGGAGAATGGATCCACTATAGTCTGGAATTTTCCATTCTTCTATTT TGTATTCTTTGCTTCAGGAATCATTACATATTATTTGTATTCTAAGAAAGGATCTCTTCAAATCAATCTATTTAAATATT CTTTTCTTTCTTATCTCATCTTCCTATTTTTTATTGAATTTCTGAAAAATGAAGTACCTTATTTTACTACTTTTTTAAAT AGCTCATTAAAAACAGATGCAAATCCTAGAACTTCATGGACAGGATTTACTTTTTCTCAAATCCAAGCGCTATTTTTTGG AATTGTTGTATTAATCAGAAGTTATAGAAAATAA
Upstream 100 bases:
>100_bases ATGCCAGTCCCTAACGTCCCGTTGGGACTCAGGGTCGGGGAACTTCGGTAAGCCTAGTTCGTTATGCGACATTTATTTAA ATTTATCTTGAAGGAAAAAA
Downstream 100 bases:
>100_bases ACGTCGCATAACAGCGACTTACCGCTACGCTTCGGCACAAGGCCTCGCTCGGGCTACGCCAAATTGTCCTCCTGGCATTC GCCTTGCGTTCGCAAGCTAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MEFEISPVKLSQLIFLILLINQFQVIGDWNKIKEFSKLLILLKLSDILISAFFEILNFWPFIWHFDQGFIHSLNTILFTW NGFSQFEKIGLWNVLFTFPKFNLISDFLSIILAIKYFKFKTLNDDKINQNKFIYPIFVFGLILNFGFIISDYQISSNSSN VNIPILTKEILQENGSTIVWNFPFFYFVFFASGIITYYLYSKKGSLQINLFKYSFLSYLIFLFFIEFLKNEVPYFTTFLN SSLKTDANPRTSWTGFTFSQIQALFFGIVVLIRSYRK
Sequences:
>Translated_277_residues MEFEISPVKLSQLIFLILLINQFQVIGDWNKIKEFSKLLILLKLSDILISAFFEILNFWPFIWHFDQGFIHSLNTILFTW NGFSQFEKIGLWNVLFTFPKFNLISDFLSIILAIKYFKFKTLNDDKINQNKFIYPIFVFGLILNFGFIISDYQISSNSSN VNIPILTKEILQENGSTIVWNFPFFYFVFFASGIITYYLYSKKGSLQINLFKYSFLSYLIFLFFIEFLKNEVPYFTTFLN SSLKTDANPRTSWTGFTFSQIQALFFGIVVLIRSYRK >Mature_277_residues MEFEISPVKLSQLIFLILLINQFQVIGDWNKIKEFSKLLILLKLSDILISAFFEILNFWPFIWHFDQGFIHSLNTILFTW NGFSQFEKIGLWNVLFTFPKFNLISDFLSIILAIKYFKFKTLNDDKINQNKFIYPIFVFGLILNFGFIISDYQISSNSSN VNIPILTKEILQENGSTIVWNFPFFYFVFFASGIITYYLYSKKGSLQINLFKYSFLSYLIFLFFIEFLKNEVPYFTTFLN SSLKTDANPRTSWTGFTFSQIQALFFGIVVLIRSYRK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32772; Mature: 32772
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 0.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFEISPVKLSQLIFLILLINQFQVIGDWNKIKEFSKLLILLKLSDILISAFFEILNFWP CCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FIWHFDQGFIHSLNTILFTWNGFSQFEKIGLWNVLFTFPKFNLISDFLSIILAIKYFKFK HHHHCCCHHHHHHHEEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEE TLNDDKINQNKFIYPIFVFGLILNFGFIISDYQISSNSSNVNIPILTKEILQENGSTIVW ECCCCCCCCCCEEHHHHHHHHHHHHHHHEEEEEECCCCCCEEEEEEEHHHHHCCCCEEEE NFPFFYFVFFASGIITYYLYSKKGSLQINLFKYSFLSYLIFLFFIEFLKNEVPYFTTFLN ECHHHHHHHHHHHHHHHHEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHC SSLKTDANPRTSWTGFTFSQIQALFFGIVVLIRSYRK CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEFEISPVKLSQLIFLILLINQFQVIGDWNKIKEFSKLLILLKLSDILISAFFEILNFWP CCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FIWHFDQGFIHSLNTILFTWNGFSQFEKIGLWNVLFTFPKFNLISDFLSIILAIKYFKFK HHHHCCCHHHHHHHEEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHEE TLNDDKINQNKFIYPIFVFGLILNFGFIISDYQISSNSSNVNIPILTKEILQENGSTIVW ECCCCCCCCCCEEHHHHHHHHHHHHHHHEEEEEECCCCCCEEEEEEEHHHHHCCCCEEEE NFPFFYFVFFASGIITYYLYSKKGSLQINLFKYSFLSYLIFLFFIEFLKNEVPYFTTFLN ECHHHHHHHHHHHHHHHHEEECCCCEEEEEHHHHHHHHHHHHHHHHHHHCCCCHHHHHHC SSLKTDANPRTSWTGFTFSQIQALFFGIVVLIRSYRK CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA