Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
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Accession | NC_010602 |
Length | 3,599,677 |
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The map label for this gene is 183221537
Identifier: 183221537
GI number: 183221537
Start: 2244729
End: 2246015
Strand: Direct
Name: 183221537
Synonym: LEPBI_I2155
Alternate gene names: NA
Gene position: 2244729-2246015 (Clockwise)
Preceding gene: 183221536
Following gene: 183221539
Centisome position: 62.36
GC content: 42.19
Gene sequence:
>1287_bases ATGCGTGTCCTTCTCCTCTCTGTTCTCTTTCTTTTTTTCTCCATCCAATGCACAAGCCTCGCCAAACGGAAAGACTATGA AGAATCCCTTCAGTTTTACAAAAAAGTAGAGATTGACAATGCCATCACAAGCTTACCTCGGAACGAACGAAGAGGATTCA TTGCTGTATTAGAAAAAGCGCATCTATCTTTCTTAAATGGTGGGACAAAATTTAGTGACCTTGAGTCTTTAGCAGAAGAA AGTAAGGAACGTTTGCGTTTCAGTGCCACTAGATCCTTAAAGTCCTTTTTTTATATGGAATCTGAAGATGGGTATTATGC TTCAGAAGCAGAAATCATCTACCTTCACATTTTACTTGGTCTCTATTATGCTCGCGTGGAAGATTACGAAAAAGCAAAAA TCCAAGCAAGGTATGCGGGGAATTTACTGAGTGGAGAATGGAGTGCGGAGGGTCAGTTTGACGATCCCACCTTACGGTTA TTACTTGCCTCACTTTGGCTCACCACAGGAGCAAAAGAAGAAGCCATGGTGGATTTCAGAAAGGCAACCCAACTCAAACC TCAATCTCACTCCATTCGTTCGTTTGCAATGGAGATGGTCCCAACTGATGGTGAGTTTATTTTTATCTTCGGTGGCCCAG GTGCGGAACCTGAGATGGAACCTTCTGCGAATCTCAATTTCATCCGTGGACTCCGAAATCTTAAATTTCGCGCCTCTGGA AATCAAAGCACCCTTCTTTTAGTGGATCAATCCAAAACGATGACTTTGAGTTTGGAAAAAGGAACTTTAGGATGGTATGA ACGCCATCTCATTCGAGACAATGAAATTTCTGAACTCATCCAAGACTCAAAGTACTTCCAATTGATCTCTGCAACAGCCA TCAAAGAAGGAACCAAAGGGACTTTAAAAGTGACAGGGTCCATCCTTGCCAGCGCCACCATCATTGCATTAGGTGCTGGA ATGGTGTATGTTGGTGCGGAAGTGAATTCGGAAGACTTAGCAGGGCTTGGAATCATCACAATCATTGCAGGATTTCAGTT GGGGAGTGAATGGGTCAGCGCTTCAGTTCGACAAACAAAAGAGAATATCAAAGAAGACTTGGATATTTCAAACGAATACC GTTATGTCCGATTTTTCCCAGAATATGTTTGGATCGGAAAATCCAAAACAAAACTGAAATCACCGATCCTTACTTCCAAC AAAGGTCCAGTGACCTACCACCTTACTCCCGCTATGGGAAAAATCAAAGTTAGATTTGGATTTGTTCCAGATGTTCAGAA TCCATAA
Upstream 100 bases:
>100_bases ATTGGGAGTGGACGACCAAATCTTTGGAAGTTGAGTTTGAATCGGGACTCAAATCTTATTTCGAATAGACAAGTTTCAAA TCAAGGGAAGGATATGCCAG
Downstream 100 bases:
>100_bases CCTTCGACTCTACTCTTTTTCAAAAAATTAGTTTGTTCTGACCATACAATTTGGTTGGTTTCCAAACTTACAAGAAAAAG TGTCACGGTGATGTATTGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 428; Mature: 428
Protein sequence:
>428_residues MRVLLLSVLFLFFSIQCTSLAKRKDYEESLQFYKKVEIDNAITSLPRNERRGFIAVLEKAHLSFLNGGTKFSDLESLAEE SKERLRFSATRSLKSFFYMESEDGYYASEAEIIYLHILLGLYYARVEDYEKAKIQARYAGNLLSGEWSAEGQFDDPTLRL LLASLWLTTGAKEEAMVDFRKATQLKPQSHSIRSFAMEMVPTDGEFIFIFGGPGAEPEMEPSANLNFIRGLRNLKFRASG NQSTLLLVDQSKTMTLSLEKGTLGWYERHLIRDNEISELIQDSKYFQLISATAIKEGTKGTLKVTGSILASATIIALGAG MVYVGAEVNSEDLAGLGIITIIAGFQLGSEWVSASVRQTKENIKEDLDISNEYRYVRFFPEYVWIGKSKTKLKSPILTSN KGPVTYHLTPAMGKIKVRFGFVPDVQNP
Sequences:
>Translated_428_residues MRVLLLSVLFLFFSIQCTSLAKRKDYEESLQFYKKVEIDNAITSLPRNERRGFIAVLEKAHLSFLNGGTKFSDLESLAEE SKERLRFSATRSLKSFFYMESEDGYYASEAEIIYLHILLGLYYARVEDYEKAKIQARYAGNLLSGEWSAEGQFDDPTLRL LLASLWLTTGAKEEAMVDFRKATQLKPQSHSIRSFAMEMVPTDGEFIFIFGGPGAEPEMEPSANLNFIRGLRNLKFRASG NQSTLLLVDQSKTMTLSLEKGTLGWYERHLIRDNEISELIQDSKYFQLISATAIKEGTKGTLKVTGSILASATIIALGAG MVYVGAEVNSEDLAGLGIITIIAGFQLGSEWVSASVRQTKENIKEDLDISNEYRYVRFFPEYVWIGKSKTKLKSPILTSN KGPVTYHLTPAMGKIKVRFGFVPDVQNP >Mature_428_residues MRVLLLSVLFLFFSIQCTSLAKRKDYEESLQFYKKVEIDNAITSLPRNERRGFIAVLEKAHLSFLNGGTKFSDLESLAEE SKERLRFSATRSLKSFFYMESEDGYYASEAEIIYLHILLGLYYARVEDYEKAKIQARYAGNLLSGEWSAEGQFDDPTLRL LLASLWLTTGAKEEAMVDFRKATQLKPQSHSIRSFAMEMVPTDGEFIFIFGGPGAEPEMEPSANLNFIRGLRNLKFRASG NQSTLLLVDQSKTMTLSLEKGTLGWYERHLIRDNEISELIQDSKYFQLISATAIKEGTKGTLKVTGSILASATIIALGAG MVYVGAEVNSEDLAGLGIITIIAGFQLGSEWVSASVRQTKENIKEDLDISNEYRYVRFFPEYVWIGKSKTKLKSPILTSN KGPVTYHLTPAMGKIKVRFGFVPDVQNP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48095; Mature: 48095
Theoretical pI: Translated: 7.08; Mature: 7.08
Prosite motif: PS50005 TPR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVLLLSVLFLFFSIQCTSLAKRKDYEESLQFYKKVEIDNAITSLPRNERRGFIAVLEKA CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH HLSFLNGGTKFSDLESLAEESKERLRFSATRSLKSFFYMESEDGYYASEAEIIYLHILLG HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEECCCHHHHHHHHHH LYYARVEDYEKAKIQARYAGNLLSGEWSAEGQFDDPTLRLLLASLWLTTGAKEEAMVDFR HHHHHHHHHHHHEEEEECCCCEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHH KATQLKPQSHSIRSFAMEMVPTDGEFIFIFGGPGAEPEMEPSANLNFIRGLRNLKFRASG HHHCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCEEEECC NQSTLLLVDQSKTMTLSLEKGTLGWYERHLIRDNEISELIQDSKYFQLISATAIKEGTKG CCCEEEEEECCCEEEEEEECCCCCHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHCCCCCC TLKVTGSILASATIIALGAGMVYVGAEVNSEDLAGLGIITIIAGFQLGSEWVSASVRQTK EEEEEHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHH ENIKEDLDISNEYRYVRFFPEYVWIGKSKTKLKSPILTSNKGPVTYHLTPAMGKIKVRFG HHHHHHCCCCCCEEEEEEECCEEEECCCHHHHCCCCEECCCCCEEEEECCCCCEEEEEEE FVPDVQNP CCCCCCCC >Mature Secondary Structure MRVLLLSVLFLFFSIQCTSLAKRKDYEESLQFYKKVEIDNAITSLPRNERRGFIAVLEKA CHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH HLSFLNGGTKFSDLESLAEESKERLRFSATRSLKSFFYMESEDGYYASEAEIIYLHILLG HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCEEECCCHHHHHHHHHH LYYARVEDYEKAKIQARYAGNLLSGEWSAEGQFDDPTLRLLLASLWLTTGAKEEAMVDFR HHHHHHHHHHHHEEEEECCCCEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHH KATQLKPQSHSIRSFAMEMVPTDGEFIFIFGGPGAEPEMEPSANLNFIRGLRNLKFRASG HHHCCCCCCHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCEEEECC NQSTLLLVDQSKTMTLSLEKGTLGWYERHLIRDNEISELIQDSKYFQLISATAIKEGTKG CCCEEEEEECCCEEEEEEECCCCCHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHCCCCCC TLKVTGSILASATIIALGAGMVYVGAEVNSEDLAGLGIITIIAGFQLGSEWVSASVRQTK EEEEEHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHH ENIKEDLDISNEYRYVRFFPEYVWIGKSKTKLKSPILTSNKGPVTYHLTPAMGKIKVRFG HHHHHHCCCCCCEEEEEEECCEEEECCCHHHHCCCCEECCCCCEEEEECCCCCEEEEEEE FVPDVQNP CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA