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The map label for this gene is yohD [C]

Identifier: 183221507

GI number: 183221507

Start: 2217330

End: 2218934

Strand: Direct

Name: yohD [C]

Synonym: LEPBI_I2125

Alternate gene names: 183221507

Gene position: 2217330-2218934 (Clockwise)

Preceding gene: 183221504

Following gene: 183221511

Centisome position: 61.6

GC content: 34.89

Gene sequence:

>1605_bases
GTGAAAAATTTATTTCTCGTTTTATTTTTTTCTACATTTGTCTCAGAAGACATCACCTGCATCACTGCAGGTATTTTTGC
GAAAGAAGGGAAACTTTCACTGGTATTAGCCATTCTATTCACTGGATTTGGAATTTTTATCGGTGACCTACTCTTATATC
TTGTTGGATATTCTTTCCATACCTATTTGAAACAGTGGAAACGAATCGAGAGATGGGAAAAAAAATTATCCTCTCAAAAA
ATTTACAAACAATGGAAATCTAATTTCGTATTTTCCATTTTGATCTCACGATTTTTACCAGGAACCAGGTTACCACTTTA
TCTCTTAAGTGGATACTTTCGAATGCCATTTGTAAATTTTATGATCACAAGTTTCATTGCTGTGACCATTTGGACAACAG
CTTTTGTAACACTTGTTTATTTATATGGAAAATGGATTTCATCCTATTTTTTCAATTTTTCGCATTGGTGGGGTTTCATT
TCCATCGGTCTTAGTTTTTATCTCATTTTCCAATTGTTTCTACTGATATTGATTCCGGAAAAAAGATCAAAACTATTTTT
GCAATGCCAGAAGTTTACCAAATTGGAATTTTGGCCCAGTTATCTTTTTTATTTACCACTCGTTCCATATCTATTCTATC
TCATCTTCAAATACCGGGGGATTCGATACCTAACGACAACAAACCCAGGGATCATTGCCTCAGGCATTGCTGGCGAATCC
AAATCTGAAATCCTAAATCTAATCCCAAATGAATTTGTTTCCAAATCCTTACTTGTTAGAAATGAGAATCCAAAAAAAAT
ACAAGCGGTCACCAAATGGATGAAACAAAAGAAATTGGACTTCCCCATCATCGCCAAACCAGACAAAGGGGAACGTGGGT
TTCTTGTGAAAAAAATTCATTCAATTTCTGAATTGGAACAATTGTTTCAAACATACACAATTGACTGGTTACTACAAGAA
TGGATGAGAGGCCCCTATGAGGTGGGAATCTTTTATTATCGAAATCCAGATGAACCTCATGGCAACATATTCTCAATCAC
AGACAAAGTGTTTCCCAAAATTACGGGCGATGGAATTTCCACATTAGAAACATTAATTCAAAACCATCCAAGGTACCGAT
TCCAATGGGAGTCGCACAAAAAACACAACCAAAGATTTTTACAAAACATCATTCCAAAAGGAAAAACAATTTTCATCGGA
ACGATTGGGAATCACATCCAAGGATGTATGTTCCAAGACGGCGAACACTTACGAACCTCTAAATTAGAAAAACAATTGAT
AAGAATCGGAGACAAAACAAAAGGATTCTTTTTTGGAAGGTTTGATATACGTTATTCCCAAAAGAAAGACCTACTGGAAG
GGAAAGGTCTCAAGATCATTGAGCTAAATGGAGTGACAAGTGAATCAACCAATTTGTATGATCCGAAGTTTAGTATTAGA
CAAAGTTATTCCATTTTATTCAGGCAATGGAAACTTATCTTTGAAATTGGATACAAAAATCATTCCCTGGGTATTCCTTT
CACTCCATACCAAAAAATATTCCAATTGATCTGTGATCACAATGATTACAGGAAAAAATTCAGTTTGTTGGAAACAAATC
TCTGA

Upstream 100 bases:

>100_bases
TTGCCATACAAGTGCAAAGAACAAAGGATAAAATGAGAGGCAAACCATAAAATCCTGATTTCAATTGACCATTTTCAAAA
AAAAACCAGTTTAGTCATGA

Downstream 100 bases:

>100_bases
TGTAAGGGATTTTTTTTCTTTCGAAGTACAATAAATAAATGGAAAACAAAAAAACAATGACTGCGAGAAGAAAAAGTAAC
CCGCCATCATCTTGAACGAC

Product: hypothetical protein

Products: NA

Alternate protein names: SNARE Associated Golgi Protein; Alpha/Beta Hydrolase Fold Protein; Transcriptional Activator HlyU; Ribosomal S6 RimK

Number of amino acids: Translated: 534; Mature: 534

Protein sequence:

>534_residues
MKNLFLVLFFSTFVSEDITCITAGIFAKEGKLSLVLAILFTGFGIFIGDLLLYLVGYSFHTYLKQWKRIERWEKKLSSQK
IYKQWKSNFVFSILISRFLPGTRLPLYLLSGYFRMPFVNFMITSFIAVTIWTTAFVTLVYLYGKWISSYFFNFSHWWGFI
SIGLSFYLIFQLFLLILIPEKRSKLFLQCQKFTKLEFWPSYLFYLPLVPYLFYLIFKYRGIRYLTTTNPGIIASGIAGES
KSEILNLIPNEFVSKSLLVRNENPKKIQAVTKWMKQKKLDFPIIAKPDKGERGFLVKKIHSISELEQLFQTYTIDWLLQE
WMRGPYEVGIFYYRNPDEPHGNIFSITDKVFPKITGDGISTLETLIQNHPRYRFQWESHKKHNQRFLQNIIPKGKTIFIG
TIGNHIQGCMFQDGEHLRTSKLEKQLIRIGDKTKGFFFGRFDIRYSQKKDLLEGKGLKIIELNGVTSESTNLYDPKFSIR
QSYSILFRQWKLIFEIGYKNHSLGIPFTPYQKIFQLICDHNDYRKKFSLLETNL

Sequences:

>Translated_534_residues
MKNLFLVLFFSTFVSEDITCITAGIFAKEGKLSLVLAILFTGFGIFIGDLLLYLVGYSFHTYLKQWKRIERWEKKLSSQK
IYKQWKSNFVFSILISRFLPGTRLPLYLLSGYFRMPFVNFMITSFIAVTIWTTAFVTLVYLYGKWISSYFFNFSHWWGFI
SIGLSFYLIFQLFLLILIPEKRSKLFLQCQKFTKLEFWPSYLFYLPLVPYLFYLIFKYRGIRYLTTTNPGIIASGIAGES
KSEILNLIPNEFVSKSLLVRNENPKKIQAVTKWMKQKKLDFPIIAKPDKGERGFLVKKIHSISELEQLFQTYTIDWLLQE
WMRGPYEVGIFYYRNPDEPHGNIFSITDKVFPKITGDGISTLETLIQNHPRYRFQWESHKKHNQRFLQNIIPKGKTIFIG
TIGNHIQGCMFQDGEHLRTSKLEKQLIRIGDKTKGFFFGRFDIRYSQKKDLLEGKGLKIIELNGVTSESTNLYDPKFSIR
QSYSILFRQWKLIFEIGYKNHSLGIPFTPYQKIFQLICDHNDYRKKFSLLETNL
>Mature_534_residues
MKNLFLVLFFSTFVSEDITCITAGIFAKEGKLSLVLAILFTGFGIFIGDLLLYLVGYSFHTYLKQWKRIERWEKKLSSQK
IYKQWKSNFVFSILISRFLPGTRLPLYLLSGYFRMPFVNFMITSFIAVTIWTTAFVTLVYLYGKWISSYFFNFSHWWGFI
SIGLSFYLIFQLFLLILIPEKRSKLFLQCQKFTKLEFWPSYLFYLPLVPYLFYLIFKYRGIRYLTTTNPGIIASGIAGES
KSEILNLIPNEFVSKSLLVRNENPKKIQAVTKWMKQKKLDFPIIAKPDKGERGFLVKKIHSISELEQLFQTYTIDWLLQE
WMRGPYEVGIFYYRNPDEPHGNIFSITDKVFPKITGDGISTLETLIQNHPRYRFQWESHKKHNQRFLQNIIPKGKTIFIG
TIGNHIQGCMFQDGEHLRTSKLEKQLIRIGDKTKGFFFGRFDIRYSQKKDLLEGKGLKIIELNGVTSESTNLYDPKFSIR
QSYSILFRQWKLIFEIGYKNHSLGIPFTPYQKIFQLICDHNDYRKKFSLLETNL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63027; Mature: 63027

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLFLVLFFSTFVSEDITCITAGIFAKEGKLSLVLAILFTGFGIFIGDLLLYLVGYSFH
CCCEEEHHHHHHHHCCCCCEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TYLKQWKRIERWEKKLSSQKIYKQWKSNFVFSILISRFLPGTRLPLYLLSGYFRMPFVNF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHH
MITSFIAVTIWTTAFVTLVYLYGKWISSYFFNFSHWWGFISIGLSFYLIFQLFLLILIPE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KRSKLFLQCQKFTKLEFWPSYLFYLPLVPYLFYLIFKYRGIRYLTTTNPGIIASGIAGES
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEECCCCCCC
KSEILNLIPNEFVSKSLLVRNENPKKIQAVTKWMKQKKLDFPIIAKPDKGERGFLVKKIH
HHHHHHHCHHHHHHHHHEEECCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHH
SISELEQLFQTYTIDWLLQEWMRGPYEVGIFYYRNPDEPHGNIFSITDKVFPKITGDGIS
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCEEEECHHHCCCCCCCHHH
TLETLIQNHPRYRFQWESHKKHNQRFLQNIIPKGKTIFIGTIGNHIQGCMFQDGEHLRTS
HHHHHHHCCCCEEEEEHHHHHHHHHHHHHHCCCCCEEEEEECCCHHCCCCCCCCCHHHHH
KLEKQLIRIGDKTKGFFFGRFDIRYSQKKDLLEGKGLKIIELNGVTSESTNLYDPKFSIR
HHHHHHHHHCCCCCCEEEEEEEEEECCHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHH
QSYSILFRQWKLIFEIGYKNHSLGIPFTPYQKIFQLICDHNDYRKKFSLLETNL
HHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MKNLFLVLFFSTFVSEDITCITAGIFAKEGKLSLVLAILFTGFGIFIGDLLLYLVGYSFH
CCCEEEHHHHHHHHCCCCCEEEHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TYLKQWKRIERWEKKLSSQKIYKQWKSNFVFSILISRFLPGTRLPLYLLSGYFRMPFVNF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHH
MITSFIAVTIWTTAFVTLVYLYGKWISSYFFNFSHWWGFISIGLSFYLIFQLFLLILIPE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
KRSKLFLQCQKFTKLEFWPSYLFYLPLVPYLFYLIFKYRGIRYLTTTNPGIIASGIAGES
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCEEECCCCCCC
KSEILNLIPNEFVSKSLLVRNENPKKIQAVTKWMKQKKLDFPIIAKPDKGERGFLVKKIH
HHHHHHHCHHHHHHHHHEEECCCCHHHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHH
SISELEQLFQTYTIDWLLQEWMRGPYEVGIFYYRNPDEPHGNIFSITDKVFPKITGDGIS
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCEEEECHHHCCCCCCCHHH
TLETLIQNHPRYRFQWESHKKHNQRFLQNIIPKGKTIFIGTIGNHIQGCMFQDGEHLRTS
HHHHHHHCCCCEEEEEHHHHHHHHHHHHHHCCCCCEEEEEECCCHHCCCCCCCCCHHHHH
KLEKQLIRIGDKTKGFFFGRFDIRYSQKKDLLEGKGLKIIELNGVTSESTNLYDPKFSIR
HHHHHHHHHCCCCCCEEEEEEEEEECCHHHHHCCCCEEEEEECCCCCCCCCCCCCCHHHH
QSYSILFRQWKLIFEIGYKNHSLGIPFTPYQKIFQLICDHNDYRKKFSLLETNL
HHHHHHHHHHHHHHEECCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA