Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
---|---|
Accession | NC_010602 |
Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183221511
Identifier: 183221511
GI number: 183221511
Start: 2221624
End: 2222502
Strand: Direct
Name: 183221511
Synonym: LEPBI_I2129
Alternate gene names: NA
Gene position: 2221624-2222502 (Clockwise)
Preceding gene: 183221507
Following gene: 183221512
Centisome position: 61.72
GC content: 38.11
Gene sequence:
>879_bases TTGAAACTTAATTTAACATTCTATTGTGCCACTTTCCTTTTATTGACCATCACTGGTTCTCTATCGGCTGAAACCGTCAT TTTAAAATCAGGGAAATCCTTTTATGGAAGAGTCATTGAACAAAATAGAGAGTTTCTGAAACTAAAAGAGAAAGACGGAA TCATTTTACAATTTCCAAGAACTGATATCTTGAAAGTCACTTACAAGGAATTGAATGCCAAAGAAGTGAAAAAAATTGTC GAAGTGGAAATCAAAAAAAACCTATCCTCCGAGAAAACAGAGACTGAATGGAAAGAAACATCGAATTCCAATTTTGAAAT AGTCAATGAATCAGAAGACTCGATGAAACATTTATCCCATGGATCTCAGAAAAAAATACGTTGGGGAGTGGTAGGAAGAT CCGCGATTTTACCAGGTTTAGGACAATACCACTGGGATGAACCTGTCTGGGGTTCCCTCTATCTGATCTCATTTTTAGGG GCAGCGATCAATTACCATCATGCTTGGAACGAACATATGAATGTGAAATCAGAATACCAGAATGATACTCGGTCGCTACT CTTCTTAAGCTCCGGAAATGCTGGTTTTGCTCTCCATTTCATTGATAAAAACAATTTAGCATCCGATTACAGAACCACTG CCAATTCGTTAAACACAGCCTCAGATATCCTCATCGGAATTTTTCTCATCAATCTCATCGATGCCTTCCTCCCTCGGGAA AACAAAACGAGTTCATCTCCTACTTCTTTGGACAAAAAAGTTGGTCTCCATATCAAGGCGGATATGGTGAATCATGACCA AAACTTTTATCTGGCAAGAGACCAAAGGAATGGAATGACAAGCCTAGAATACAAACTCGGATATACTTGGGCTTTTTAA
Upstream 100 bases:
>100_bases TTGAATCCAAGATTTCATTGATGGAATTTTGGATTGGCTTGCAAGAAACCACCCTTCAATGAATTTGGTGGATTCGTATG TAGTAGTTTAGGAAGACTGA
Downstream 100 bases:
>100_bases TCATGAATCAAATTCGACGAAACACTTCCCTCATTCTCTGTATCATGATCTCGTTCTCAGTTTTCAATACCAATTGTCGA GTGGATCCAAACCCCAAAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 292; Mature: 292
Protein sequence:
>292_residues MKLNLTFYCATFLLLTITGSLSAETVILKSGKSFYGRVIEQNREFLKLKEKDGIILQFPRTDILKVTYKELNAKEVKKIV EVEIKKNLSSEKTETEWKETSNSNFEIVNESEDSMKHLSHGSQKKIRWGVVGRSAILPGLGQYHWDEPVWGSLYLISFLG AAINYHHAWNEHMNVKSEYQNDTRSLLFLSSGNAGFALHFIDKNNLASDYRTTANSLNTASDILIGIFLINLIDAFLPRE NKTSSSPTSLDKKVGLHIKADMVNHDQNFYLARDQRNGMTSLEYKLGYTWAF
Sequences:
>Translated_292_residues MKLNLTFYCATFLLLTITGSLSAETVILKSGKSFYGRVIEQNREFLKLKEKDGIILQFPRTDILKVTYKELNAKEVKKIV EVEIKKNLSSEKTETEWKETSNSNFEIVNESEDSMKHLSHGSQKKIRWGVVGRSAILPGLGQYHWDEPVWGSLYLISFLG AAINYHHAWNEHMNVKSEYQNDTRSLLFLSSGNAGFALHFIDKNNLASDYRTTANSLNTASDILIGIFLINLIDAFLPRE NKTSSSPTSLDKKVGLHIKADMVNHDQNFYLARDQRNGMTSLEYKLGYTWAF >Mature_292_residues MKLNLTFYCATFLLLTITGSLSAETVILKSGKSFYGRVIEQNREFLKLKEKDGIILQFPRTDILKVTYKELNAKEVKKIV EVEIKKNLSSEKTETEWKETSNSNFEIVNESEDSMKHLSHGSQKKIRWGVVGRSAILPGLGQYHWDEPVWGSLYLISFLG AAINYHHAWNEHMNVKSEYQNDTRSLLFLSSGNAGFALHFIDKNNLASDYRTTANSLNTASDILIGIFLINLIDAFLPRE NKTSSSPTSLDKKVGLHIKADMVNHDQNFYLARDQRNGMTSLEYKLGYTWAF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33285; Mature: 33285
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLNLTFYCATFLLLTITGSLSAETVILKSGKSFYGRVIEQNREFLKLKEKDGIILQFPR CEEEEEHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHCCHHHEEEECCCCEEEEECC TDILKVTYKELNAKEVKKIVEVEIKKNLSSEKTETEWKETSNSNFEIVNESEDSMKHLSH CCEEEHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEECCHHHHHHHHC GSQKKIRWGVVGRSAILPGLGQYHWDEPVWGSLYLISFLGAAINYHHAWNEHMNVKSEYQ CCCCCEEEEECCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHC NDTRSLLFLSSGNAGFALHFIDKNNLASDYRTTANSLNTASDILIGIFLINLIDAFLPRE CCCEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC NKTSSSPTSLDKKVGLHIKADMVNHDQNFYLARDQRNGMTSLEYKLGYTWAF CCCCCCCCCHHHHCCCEEEEEEECCCCCEEEEECCCCCCCEEEEEEEEEECC >Mature Secondary Structure MKLNLTFYCATFLLLTITGSLSAETVILKSGKSFYGRVIEQNREFLKLKEKDGIILQFPR CEEEEEHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHCCHHHEEEECCCCEEEEECC TDILKVTYKELNAKEVKKIVEVEIKKNLSSEKTETEWKETSNSNFEIVNESEDSMKHLSH CCEEEHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEECCHHHHHHHHC GSQKKIRWGVVGRSAILPGLGQYHWDEPVWGSLYLISFLGAAINYHHAWNEHMNVKSEYQ CCCCCEEEEECCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHC NDTRSLLFLSSGNAGFALHFIDKNNLASDYRTTANSLNTASDILIGIFLINLIDAFLPRE CCCEEEEEEECCCCCEEEEEECCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCC NKTSSSPTSLDKKVGLHIKADMVNHDQNFYLARDQRNGMTSLEYKLGYTWAF CCCCCCCCCHHHHCCCEEEEEEECCCCCEEEEECCCCCCCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA