| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221441
Identifier: 183221441
GI number: 183221441
Start: 2148311
End: 2149765
Strand: Direct
Name: 183221441
Synonym: LEPBI_I2059
Alternate gene names: NA
Gene position: 2148311-2149765 (Clockwise)
Preceding gene: 183221440
Following gene: 183221442
Centisome position: 59.68
GC content: 40.21
Gene sequence:
>1455_bases TTGATTCGCTCCCGAGTATTTTTTGCCGTTGGGATTCTATTCTTAATCATCATCTTTTTTACCTATACCTTTGTTGATTT CCGCGAAAGAGACGACAAAGCTTACGATTTTTACCAGTCAGAATCCTATCTAAAAGTATTTAAACTTTATGGTGAATCGG AAATCCCAACGAGTGAATTGGAATTGACCATCCTTTCCCAAGCTCTTTCCCAATTGGAAAAACAATTAAACGGAAAAGAC ACAGGAAAAGATCTACTGAAATACTTTCAGAAACGAAAGGATACCAAACTGATCGAATGGGAAACCACGAGAGGAACCTA CTACCACATCGAAGATCCGTATTTTTCTCATTTGAAAAAACATGGAACAGGTTACAAACGAGCCCTCATCACAAAAATCA ATGCGATCTCCAAACCCATTCCCAAATCGGAAGTCACACATTTTTTACTGCTTTTGATTTTGGAAGACCCAAGGGGGATG GAAGAAAGTTTCAGTGAGGCTTTATCCCATTTACTCAGTTTACCCTTTGAGCCCATTGGAGAAATTGAAACTGGATTTTT ATTACAAACCTTACATTTTTTATCCCAAGTTTCAGGAACGAATCTTTACCACCAAACAGCAATCATTCGAGGAAAAAACG TCAACTTAAGAAGTGGACCAGGTCGCGAAAACGCAGAAGTAGGAAAGGTTAGCGAACCGGAACCTACAATTTGTTTGGAA GAAGATGGGACAGAAGAAACCATCGCCGGAAACATTGGCCACTGGAAACGTTGTTACTTTCCCAATACCCAAAAAACAGC TTGGATCTTTTCAGGGTTTTTGAAGGAAACCCTTGCAGAAGAAAATTTAATTTCCGAATTTGAAAAACGATTCAAGGCGG TGGACAATGAGATCCGAATCGACTTTGAAGGTTGGGATGGGAAAAAAATCCCCCAAACTTTTTTTGGGAAATACATACCA CGAGAATCGATCCGAGTGTATGGAGAAACCGGATTTCCCATTTATGGAAGTTCAGGAAAAGAATCCCCATCGGAAAGGAT CTGCAAAAAACTCTCAGGCAATAAAAACTACTTCGAATTTTCCTTTATGCCAACGGATTCAGATACTCCGATCCCCTTTC TCGAAATCCATTTGCAATATAATAATATAGAGCACCTAGCCTATTCCATTTCCTTAGATCACGATTCCATTTGGGTCAAT AAAAATCGATATGTCCTCGACGGAGCCAAAAGGAGAGAAAATCTGTCCTTACATATCGAAAATCGAATCGGCGACAAATG GAACGCAAGCCTTTGGAGAAGGAATACTGGCCTCATCCAATCCATCCGTTCCTATCCCCAATCTGAATCGATCCTCGAGG CGGGAAAGTATTCATGGGAGATTTGTCTCCCATTGGTCACAAAGCCGAACCGTGACCATGTTTTATTGTTTGAATTGAGA ACAGGAATTCATTAA
Upstream 100 bases:
>100_bases TAGATACTATGTGGCAAAAAATGCATTATTCGAAGAATACGGCGTGGACCGAGCCAAACTCCTTCCTGAAAATCTTTAAG AGAACACCGGGAGGTTCCTT
Downstream 100 bases:
>100_bases AGGAGAAACTATGGCTACCTACGATTACCACTGTCACACATGCGGAAAAGACTTTGAACACGTGCAGTCCATGAAGGAAG ATACTTTGACCGAATGCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 484; Mature: 484
Protein sequence:
>484_residues MIRSRVFFAVGILFLIIIFFTYTFVDFRERDDKAYDFYQSESYLKVFKLYGESEIPTSELELTILSQALSQLEKQLNGKD TGKDLLKYFQKRKDTKLIEWETTRGTYYHIEDPYFSHLKKHGTGYKRALITKINAISKPIPKSEVTHFLLLLILEDPRGM EESFSEALSHLLSLPFEPIGEIETGFLLQTLHFLSQVSGTNLYHQTAIIRGKNVNLRSGPGRENAEVGKVSEPEPTICLE EDGTEETIAGNIGHWKRCYFPNTQKTAWIFSGFLKETLAEENLISEFEKRFKAVDNEIRIDFEGWDGKKIPQTFFGKYIP RESIRVYGETGFPIYGSSGKESPSERICKKLSGNKNYFEFSFMPTDSDTPIPFLEIHLQYNNIEHLAYSISLDHDSIWVN KNRYVLDGAKRRENLSLHIENRIGDKWNASLWRRNTGLIQSIRSYPQSESILEAGKYSWEICLPLVTKPNRDHVLLFELR TGIH
Sequences:
>Translated_484_residues MIRSRVFFAVGILFLIIIFFTYTFVDFRERDDKAYDFYQSESYLKVFKLYGESEIPTSELELTILSQALSQLEKQLNGKD TGKDLLKYFQKRKDTKLIEWETTRGTYYHIEDPYFSHLKKHGTGYKRALITKINAISKPIPKSEVTHFLLLLILEDPRGM EESFSEALSHLLSLPFEPIGEIETGFLLQTLHFLSQVSGTNLYHQTAIIRGKNVNLRSGPGRENAEVGKVSEPEPTICLE EDGTEETIAGNIGHWKRCYFPNTQKTAWIFSGFLKETLAEENLISEFEKRFKAVDNEIRIDFEGWDGKKIPQTFFGKYIP RESIRVYGETGFPIYGSSGKESPSERICKKLSGNKNYFEFSFMPTDSDTPIPFLEIHLQYNNIEHLAYSISLDHDSIWVN KNRYVLDGAKRRENLSLHIENRIGDKWNASLWRRNTGLIQSIRSYPQSESILEAGKYSWEICLPLVTKPNRDHVLLFELR TGIH >Mature_484_residues MIRSRVFFAVGILFLIIIFFTYTFVDFRERDDKAYDFYQSESYLKVFKLYGESEIPTSELELTILSQALSQLEKQLNGKD TGKDLLKYFQKRKDTKLIEWETTRGTYYHIEDPYFSHLKKHGTGYKRALITKINAISKPIPKSEVTHFLLLLILEDPRGM EESFSEALSHLLSLPFEPIGEIETGFLLQTLHFLSQVSGTNLYHQTAIIRGKNVNLRSGPGRENAEVGKVSEPEPTICLE EDGTEETIAGNIGHWKRCYFPNTQKTAWIFSGFLKETLAEENLISEFEKRFKAVDNEIRIDFEGWDGKKIPQTFFGKYIP RESIRVYGETGFPIYGSSGKESPSERICKKLSGNKNYFEFSFMPTDSDTPIPFLEIHLQYNNIEHLAYSISLDHDSIWVN KNRYVLDGAKRRENLSLHIENRIGDKWNASLWRRNTGLIQSIRSYPQSESILEAGKYSWEICLPLVTKPNRDHVLLFELR TGIH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56067; Mature: 56067
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRSRVFFAVGILFLIIIFFTYTFVDFRERDDKAYDFYQSESYLKVFKLYGESEIPTSEL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHCCCCCCHHHH ELTILSQALSQLEKQLNGKDTGKDLLKYFQKRKDTKLIEWETTRGTYYHIEDPYFSHLKK HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEEECCCEEEEECCHHHHHHHH HGTGYKRALITKINAISKPIPKSEVTHFLLLLILEDPRGMEESFSEALSHLLSLPFEPIG HCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHCCCCCCC EIETGFLLQTLHFLSQVSGTNLYHQTAIIRGKNVNLRSGPGRENAEVGKVSEPEPTICLE CCHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEC EDGTEETIAGNIGHWKRCYFPNTQKTAWIFSGFLKETLAEENLISEFEKRFKAVDNEIRI CCCCCHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE DFEGWDGKKIPQTFFGKYIPRESIRVYGETGFPIYGSSGKESPSERICKKLSGNKNYFEF EEECCCCCCCCHHHHHCCCCCCCEEEEECCCCEEECCCCCCCHHHHHHHHHCCCCCEEEE SFMPTDSDTPIPFLEIHLQYNNIEHLAYSISLDHDSIWVNKNRYVLDGAKRRENLSLHIE EEECCCCCCCCCEEEEEEEECCEEEEEEEEEECCCEEEEECCEEEECCCCCCCCCEEEEE NRIGDKWNASLWRRNTGLIQSIRSYPQSESILEAGKYSWEICLPLVTKPNRDHVLLFELR CCCCCCCCHHHHHCCHHHHHHHHCCCCCHHHHHHCCCCEEEEEEEECCCCCCCEEEEEEC TGIH CCCC >Mature Secondary Structure MIRSRVFFAVGILFLIIIFFTYTFVDFRERDDKAYDFYQSESYLKVFKLYGESEIPTSEL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHCCCCCCHHHH ELTILSQALSQLEKQLNGKDTGKDLLKYFQKRKDTKLIEWETTRGTYYHIEDPYFSHLKK HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCEEEEEEECCCEEEEECCHHHHHHHH HGTGYKRALITKINAISKPIPKSEVTHFLLLLILEDPRGMEESFSEALSHLLSLPFEPIG HCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHCCCCCCC EIETGFLLQTLHFLSQVSGTNLYHQTAIIRGKNVNLRSGPGRENAEVGKVSEPEPTICLE CCHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEC EDGTEETIAGNIGHWKRCYFPNTQKTAWIFSGFLKETLAEENLISEFEKRFKAVDNEIRI CCCCCHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE DFEGWDGKKIPQTFFGKYIPRESIRVYGETGFPIYGSSGKESPSERICKKLSGNKNYFEF EEECCCCCCCCHHHHHCCCCCCCEEEEECCCCEEECCCCCCCHHHHHHHHHCCCCCEEEE SFMPTDSDTPIPFLEIHLQYNNIEHLAYSISLDHDSIWVNKNRYVLDGAKRRENLSLHIE EEECCCCCCCCCEEEEEEEECCEEEEEEEEEECCCEEEEECCEEEECCCCCCCCCEEEEE NRIGDKWNASLWRRNTGLIQSIRSYPQSESILEAGKYSWEICLPLVTKPNRDHVLLFELR CCCCCCCCHHHHHCCHHHHHHHHCCCCCHHHHHHCCCCEEEEEEEECCCCCCCEEEEEEC TGIH CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA