| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183221440
Identifier: 183221440
GI number: 183221440
Start: 2146748
End: 2148289
Strand: Direct
Name: 183221440
Synonym: LEPBI_I2058
Alternate gene names: NA
Gene position: 2146748-2148289 (Clockwise)
Preceding gene: 183221439
Following gene: 183221441
Centisome position: 59.64
GC content: 42.74
Gene sequence:
>1542_bases ATGGAACGACGTTCATGGGTTTCTAGTGGATTGATTCTCTTCATTTCCTTCGGTCTTCTCGCAGCCGAATCGGATCCAAA AGGTTTTACCTTAAGTTTGAAGGATGCGGTCCAGTATGCGATCGAAAATAACCGCGAAGTGTTACAAGCACGATTGGAAT TGGCGAAAGCTGATTCCAATTTAATGAAGTACGAAGCCAAATATTCTTGGCGAGCCATTTCTCGGGCCGAAATCGACCAA AAGAAATTCCCTTTCAACCAAAACAATATCTTCACGGGAACCAAAACCCAAACCAATACCTACAGTGCAGGGATTGAGAA ACTGTTTACGACAGGAACTTATTTCAAATTAGAAGCCAGATCCCAAAGATTTGACTCGAACGCATTTGAAAATCCAAACC AAACTCCGGCAGGCTTTACCGCACTCGGACTTCCTCCCCTCTACACTGACTCTTTGTCTGTGACCATCGCACAAGACCTT CTCAAAAATGCCTTTGGTGCCAACGAAAGGAATATGGAAAAAATCCTCGAAAACCAAACGGAGATCATGCGGGAACAAAT GGAAGACCAAGTGGCATCCAAAGTGGTTTCCACTCTTGTGGACTATTGGAATTATTCCGTCAAAGAATCAGGATTCCAAA CCTTCGAACAATTATTAAAGAATACAAAAAACGTACGGGACCTCACCATCCGAAAACAAGGTTTAGGCCTATCCGAAAGT TTTGAAGTCAACCAGTGGAATGCCCTACTCTCACAAGTCGAAGGGCAAATGGCACAAGCAACCGCAGAAAAAGAGGAAGC AAGACGAAAACTGATTCGGTCTTTGAACCTTCCTGAGGACACAGTTTTCCAAAAAACGACTCCCCTTTCGGAAGTGTTAC CAGAGAAACTTGATTACCAAGCAGACATTGATTACGCATACAAACATAGAGCTGATTTCCGTGCCATCCAACGGAAAAAA GAAAATGCGGAACTCGCCATGAAAATGGCAAAAAACGAAGCCTTACCTTCGTTAAAAGCTGCCGGAACATATGGATACCA AGCACAAAATACGATCAGTCCTCAAAACAATTATTCTGACGGCAGACAAGGTGTGCTCTCTTACCAATACCCTGTGATGC AAGGGTCATTGGATCTCAGTTACCCCATTATGGACAAAGGGGTAAAAGTAGGAATCCGCGATGCGGAAATCCAAAGGCGA CAAGTATCCCTCGAAGAAGCAGACCTTGTAAAAGCAGTTTCCGATGACGTCAAAACAAGAATTGATATTTTAAAAGCTTC TTACCGTGTGATGGAAAATGCAAAACGAACCGAAGAAGAATCTAAAAAGTATTACAACGGAGTCCTACGATCATTCCAAC AAGGAAGGTTCAATGCACTTGCAGTGAAAAATGCTTTAGACACATTGGTTCAGGATCAACTTTCCCTCGTCAGAGCGAAG GTGGATTACAACATCAATTTACATAGATACTATGTGGCAAAAAATGCATTATTCGAAGAATACGGCGTGGACCGAGCCAA ACTCCTTCCTGAAAATCTTTAA
Upstream 100 bases:
>100_bases GGAGAAGTGGGAGAAAAAATGAAGGCAGCCTTTAAAAAATAAGGGCTTTTTTCGAAAAAAAACAACTTTGCAAGGGAAAT GAGGAGTCTGAATTAAGAAT
Downstream 100 bases:
>100_bases GAGAACACCGGGAGGTTCCTTTTGATTCGCTCCCGAGTATTTTTTGCCGTTGGGATTCTATTCTTAATCATCATCTTTTT TACCTATACCTTTGTTGATT
Product: putative outer membrane efflux protein
Products: NA
Alternate protein names: LC-Like Outer Membrane Efflux Protein; Cytoplasmic Membrane Protein
Number of amino acids: Translated: 513; Mature: 513
Protein sequence:
>513_residues MERRSWVSSGLILFISFGLLAAESDPKGFTLSLKDAVQYAIENNREVLQARLELAKADSNLMKYEAKYSWRAISRAEIDQ KKFPFNQNNIFTGTKTQTNTYSAGIEKLFTTGTYFKLEARSQRFDSNAFENPNQTPAGFTALGLPPLYTDSLSVTIAQDL LKNAFGANERNMEKILENQTEIMREQMEDQVASKVVSTLVDYWNYSVKESGFQTFEQLLKNTKNVRDLTIRKQGLGLSES FEVNQWNALLSQVEGQMAQATAEKEEARRKLIRSLNLPEDTVFQKTTPLSEVLPEKLDYQADIDYAYKHRADFRAIQRKK ENAELAMKMAKNEALPSLKAAGTYGYQAQNTISPQNNYSDGRQGVLSYQYPVMQGSLDLSYPIMDKGVKVGIRDAEIQRR QVSLEEADLVKAVSDDVKTRIDILKASYRVMENAKRTEEESKKYYNGVLRSFQQGRFNALAVKNALDTLVQDQLSLVRAK VDYNINLHRYYVAKNALFEEYGVDRAKLLPENL
Sequences:
>Translated_513_residues MERRSWVSSGLILFISFGLLAAESDPKGFTLSLKDAVQYAIENNREVLQARLELAKADSNLMKYEAKYSWRAISRAEIDQ KKFPFNQNNIFTGTKTQTNTYSAGIEKLFTTGTYFKLEARSQRFDSNAFENPNQTPAGFTALGLPPLYTDSLSVTIAQDL LKNAFGANERNMEKILENQTEIMREQMEDQVASKVVSTLVDYWNYSVKESGFQTFEQLLKNTKNVRDLTIRKQGLGLSES FEVNQWNALLSQVEGQMAQATAEKEEARRKLIRSLNLPEDTVFQKTTPLSEVLPEKLDYQADIDYAYKHRADFRAIQRKK ENAELAMKMAKNEALPSLKAAGTYGYQAQNTISPQNNYSDGRQGVLSYQYPVMQGSLDLSYPIMDKGVKVGIRDAEIQRR QVSLEEADLVKAVSDDVKTRIDILKASYRVMENAKRTEEESKKYYNGVLRSFQQGRFNALAVKNALDTLVQDQLSLVRAK VDYNINLHRYYVAKNALFEEYGVDRAKLLPENL >Mature_513_residues MERRSWVSSGLILFISFGLLAAESDPKGFTLSLKDAVQYAIENNREVLQARLELAKADSNLMKYEAKYSWRAISRAEIDQ KKFPFNQNNIFTGTKTQTNTYSAGIEKLFTTGTYFKLEARSQRFDSNAFENPNQTPAGFTALGLPPLYTDSLSVTIAQDL LKNAFGANERNMEKILENQTEIMREQMEDQVASKVVSTLVDYWNYSVKESGFQTFEQLLKNTKNVRDLTIRKQGLGLSES FEVNQWNALLSQVEGQMAQATAEKEEARRKLIRSLNLPEDTVFQKTTPLSEVLPEKLDYQADIDYAYKHRADFRAIQRKK ENAELAMKMAKNEALPSLKAAGTYGYQAQNTISPQNNYSDGRQGVLSYQYPVMQGSLDLSYPIMDKGVKVGIRDAEIQRR QVSLEEADLVKAVSDDVKTRIDILKASYRVMENAKRTEEESKKYYNGVLRSFQQGRFNALAVKNALDTLVQDQLSLVRAK VDYNINLHRYYVAKNALFEEYGVDRAKLLPENL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58429; Mature: 58429
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERRSWVSSGLILFISFGLLAAESDPKGFTLSLKDAVQYAIENNREVLQARLELAKADSN CCCHHHHHCCHHHHHHHHHHEECCCCCCEEEEHHHHHHHHHHCCHHHHHHHHHHHHCCCH LMKYEAKYSWRAISRAEIDQKKFPFNQNNIFTGTKTQTNTYSAGIEKLFTTGTYFKLEAR HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHCCCCEEEEECH SQRFDSNAFENPNQTPAGFTALGLPPLYTDSLSVTIAQDLLKNAFGANERNMEKILENQT HHHCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH EIMREQMEDQVASKVVSTLVDYWNYSVKESGFQTFEQLLKNTKNVRDLTIRKQGLGLSES HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHEEHHCCCCCCCC FEVNQWNALLSQVEGQMAQATAEKEEARRKLIRSLNLPEDTVFQKTTPLSEVLPEKLDYQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHCCCC ADIDYAYKHRADFRAIQRKKENAELAMKMAKNEALPSLKAAGTYGYQAQNTISPQNNYSD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCC GRQGVLSYQYPVMQGSLDLSYPIMDKGVKVGIRDAEIQRRQVSLEEADLVKAVSDDVKTR CCCCCEEEECCEEECCCCCCCCHHCCCCEECCCHHHHHHHHHCHHHHHHHHHHHHHHHHH IDILKASYRVMENAKRTEEESKKYYNGVLRSFQQGRFNALAVKNALDTLVQDQLSLVRAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH VDYNINLHRYYVAKNALFEEYGVDRAKLLPENL HCCCEEEEEEEHHHHHHHHHHCCCHHHHCCCCC >Mature Secondary Structure MERRSWVSSGLILFISFGLLAAESDPKGFTLSLKDAVQYAIENNREVLQARLELAKADSN CCCHHHHHCCHHHHHHHHHHEECCCCCCEEEEHHHHHHHHHHCCHHHHHHHHHHHHCCCH LMKYEAKYSWRAISRAEIDQKKFPFNQNNIFTGTKTQTNTYSAGIEKLFTTGTYFKLEAR HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHCCCCEEEEECH SQRFDSNAFENPNQTPAGFTALGLPPLYTDSLSVTIAQDLLKNAFGANERNMEKILENQT HHHCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH EIMREQMEDQVASKVVSTLVDYWNYSVKESGFQTFEQLLKNTKNVRDLTIRKQGLGLSES HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHEEHHCCCCCCCC FEVNQWNALLSQVEGQMAQATAEKEEARRKLIRSLNLPEDTVFQKTTPLSEVLPEKLDYQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHCCCC ADIDYAYKHRADFRAIQRKKENAELAMKMAKNEALPSLKAAGTYGYQAQNTISPQNNYSD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCC GRQGVLSYQYPVMQGSLDLSYPIMDKGVKVGIRDAEIQRRQVSLEEADLVKAVSDDVKTR CCCCCEEEECCEEECCCCCCCCHHCCCCEECCCHHHHHHHHHCHHHHHHHHHHHHHHHHH IDILKASYRVMENAKRTEEESKKYYNGVLRSFQQGRFNALAVKNALDTLVQDQLSLVRAK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH VDYNINLHRYYVAKNALFEEYGVDRAKLLPENL HCCCEEEEEEEHHHHHHHHHHCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA