Definition Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence.
Accession NC_010602
Length 3,599,677

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The map label for this gene is 183221440

Identifier: 183221440

GI number: 183221440

Start: 2146748

End: 2148289

Strand: Direct

Name: 183221440

Synonym: LEPBI_I2058

Alternate gene names: NA

Gene position: 2146748-2148289 (Clockwise)

Preceding gene: 183221439

Following gene: 183221441

Centisome position: 59.64

GC content: 42.74

Gene sequence:

>1542_bases
ATGGAACGACGTTCATGGGTTTCTAGTGGATTGATTCTCTTCATTTCCTTCGGTCTTCTCGCAGCCGAATCGGATCCAAA
AGGTTTTACCTTAAGTTTGAAGGATGCGGTCCAGTATGCGATCGAAAATAACCGCGAAGTGTTACAAGCACGATTGGAAT
TGGCGAAAGCTGATTCCAATTTAATGAAGTACGAAGCCAAATATTCTTGGCGAGCCATTTCTCGGGCCGAAATCGACCAA
AAGAAATTCCCTTTCAACCAAAACAATATCTTCACGGGAACCAAAACCCAAACCAATACCTACAGTGCAGGGATTGAGAA
ACTGTTTACGACAGGAACTTATTTCAAATTAGAAGCCAGATCCCAAAGATTTGACTCGAACGCATTTGAAAATCCAAACC
AAACTCCGGCAGGCTTTACCGCACTCGGACTTCCTCCCCTCTACACTGACTCTTTGTCTGTGACCATCGCACAAGACCTT
CTCAAAAATGCCTTTGGTGCCAACGAAAGGAATATGGAAAAAATCCTCGAAAACCAAACGGAGATCATGCGGGAACAAAT
GGAAGACCAAGTGGCATCCAAAGTGGTTTCCACTCTTGTGGACTATTGGAATTATTCCGTCAAAGAATCAGGATTCCAAA
CCTTCGAACAATTATTAAAGAATACAAAAAACGTACGGGACCTCACCATCCGAAAACAAGGTTTAGGCCTATCCGAAAGT
TTTGAAGTCAACCAGTGGAATGCCCTACTCTCACAAGTCGAAGGGCAAATGGCACAAGCAACCGCAGAAAAAGAGGAAGC
AAGACGAAAACTGATTCGGTCTTTGAACCTTCCTGAGGACACAGTTTTCCAAAAAACGACTCCCCTTTCGGAAGTGTTAC
CAGAGAAACTTGATTACCAAGCAGACATTGATTACGCATACAAACATAGAGCTGATTTCCGTGCCATCCAACGGAAAAAA
GAAAATGCGGAACTCGCCATGAAAATGGCAAAAAACGAAGCCTTACCTTCGTTAAAAGCTGCCGGAACATATGGATACCA
AGCACAAAATACGATCAGTCCTCAAAACAATTATTCTGACGGCAGACAAGGTGTGCTCTCTTACCAATACCCTGTGATGC
AAGGGTCATTGGATCTCAGTTACCCCATTATGGACAAAGGGGTAAAAGTAGGAATCCGCGATGCGGAAATCCAAAGGCGA
CAAGTATCCCTCGAAGAAGCAGACCTTGTAAAAGCAGTTTCCGATGACGTCAAAACAAGAATTGATATTTTAAAAGCTTC
TTACCGTGTGATGGAAAATGCAAAACGAACCGAAGAAGAATCTAAAAAGTATTACAACGGAGTCCTACGATCATTCCAAC
AAGGAAGGTTCAATGCACTTGCAGTGAAAAATGCTTTAGACACATTGGTTCAGGATCAACTTTCCCTCGTCAGAGCGAAG
GTGGATTACAACATCAATTTACATAGATACTATGTGGCAAAAAATGCATTATTCGAAGAATACGGCGTGGACCGAGCCAA
ACTCCTTCCTGAAAATCTTTAA

Upstream 100 bases:

>100_bases
GGAGAAGTGGGAGAAAAAATGAAGGCAGCCTTTAAAAAATAAGGGCTTTTTTCGAAAAAAAACAACTTTGCAAGGGAAAT
GAGGAGTCTGAATTAAGAAT

Downstream 100 bases:

>100_bases
GAGAACACCGGGAGGTTCCTTTTGATTCGCTCCCGAGTATTTTTTGCCGTTGGGATTCTATTCTTAATCATCATCTTTTT
TACCTATACCTTTGTTGATT

Product: putative outer membrane efflux protein

Products: NA

Alternate protein names: LC-Like Outer Membrane Efflux Protein; Cytoplasmic Membrane Protein

Number of amino acids: Translated: 513; Mature: 513

Protein sequence:

>513_residues
MERRSWVSSGLILFISFGLLAAESDPKGFTLSLKDAVQYAIENNREVLQARLELAKADSNLMKYEAKYSWRAISRAEIDQ
KKFPFNQNNIFTGTKTQTNTYSAGIEKLFTTGTYFKLEARSQRFDSNAFENPNQTPAGFTALGLPPLYTDSLSVTIAQDL
LKNAFGANERNMEKILENQTEIMREQMEDQVASKVVSTLVDYWNYSVKESGFQTFEQLLKNTKNVRDLTIRKQGLGLSES
FEVNQWNALLSQVEGQMAQATAEKEEARRKLIRSLNLPEDTVFQKTTPLSEVLPEKLDYQADIDYAYKHRADFRAIQRKK
ENAELAMKMAKNEALPSLKAAGTYGYQAQNTISPQNNYSDGRQGVLSYQYPVMQGSLDLSYPIMDKGVKVGIRDAEIQRR
QVSLEEADLVKAVSDDVKTRIDILKASYRVMENAKRTEEESKKYYNGVLRSFQQGRFNALAVKNALDTLVQDQLSLVRAK
VDYNINLHRYYVAKNALFEEYGVDRAKLLPENL

Sequences:

>Translated_513_residues
MERRSWVSSGLILFISFGLLAAESDPKGFTLSLKDAVQYAIENNREVLQARLELAKADSNLMKYEAKYSWRAISRAEIDQ
KKFPFNQNNIFTGTKTQTNTYSAGIEKLFTTGTYFKLEARSQRFDSNAFENPNQTPAGFTALGLPPLYTDSLSVTIAQDL
LKNAFGANERNMEKILENQTEIMREQMEDQVASKVVSTLVDYWNYSVKESGFQTFEQLLKNTKNVRDLTIRKQGLGLSES
FEVNQWNALLSQVEGQMAQATAEKEEARRKLIRSLNLPEDTVFQKTTPLSEVLPEKLDYQADIDYAYKHRADFRAIQRKK
ENAELAMKMAKNEALPSLKAAGTYGYQAQNTISPQNNYSDGRQGVLSYQYPVMQGSLDLSYPIMDKGVKVGIRDAEIQRR
QVSLEEADLVKAVSDDVKTRIDILKASYRVMENAKRTEEESKKYYNGVLRSFQQGRFNALAVKNALDTLVQDQLSLVRAK
VDYNINLHRYYVAKNALFEEYGVDRAKLLPENL
>Mature_513_residues
MERRSWVSSGLILFISFGLLAAESDPKGFTLSLKDAVQYAIENNREVLQARLELAKADSNLMKYEAKYSWRAISRAEIDQ
KKFPFNQNNIFTGTKTQTNTYSAGIEKLFTTGTYFKLEARSQRFDSNAFENPNQTPAGFTALGLPPLYTDSLSVTIAQDL
LKNAFGANERNMEKILENQTEIMREQMEDQVASKVVSTLVDYWNYSVKESGFQTFEQLLKNTKNVRDLTIRKQGLGLSES
FEVNQWNALLSQVEGQMAQATAEKEEARRKLIRSLNLPEDTVFQKTTPLSEVLPEKLDYQADIDYAYKHRADFRAIQRKK
ENAELAMKMAKNEALPSLKAAGTYGYQAQNTISPQNNYSDGRQGVLSYQYPVMQGSLDLSYPIMDKGVKVGIRDAEIQRR
QVSLEEADLVKAVSDDVKTRIDILKASYRVMENAKRTEEESKKYYNGVLRSFQQGRFNALAVKNALDTLVQDQLSLVRAK
VDYNINLHRYYVAKNALFEEYGVDRAKLLPENL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58429; Mature: 58429

Theoretical pI: Translated: 8.77; Mature: 8.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERRSWVSSGLILFISFGLLAAESDPKGFTLSLKDAVQYAIENNREVLQARLELAKADSN
CCCHHHHHCCHHHHHHHHHHEECCCCCCEEEEHHHHHHHHHHCCHHHHHHHHHHHHCCCH
LMKYEAKYSWRAISRAEIDQKKFPFNQNNIFTGTKTQTNTYSAGIEKLFTTGTYFKLEAR
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHCCCCEEEEECH
SQRFDSNAFENPNQTPAGFTALGLPPLYTDSLSVTIAQDLLKNAFGANERNMEKILENQT
HHHCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
EIMREQMEDQVASKVVSTLVDYWNYSVKESGFQTFEQLLKNTKNVRDLTIRKQGLGLSES
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHEEHHCCCCCCCC
FEVNQWNALLSQVEGQMAQATAEKEEARRKLIRSLNLPEDTVFQKTTPLSEVLPEKLDYQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHCCCC
ADIDYAYKHRADFRAIQRKKENAELAMKMAKNEALPSLKAAGTYGYQAQNTISPQNNYSD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCC
GRQGVLSYQYPVMQGSLDLSYPIMDKGVKVGIRDAEIQRRQVSLEEADLVKAVSDDVKTR
CCCCCEEEECCEEECCCCCCCCHHCCCCEECCCHHHHHHHHHCHHHHHHHHHHHHHHHHH
IDILKASYRVMENAKRTEEESKKYYNGVLRSFQQGRFNALAVKNALDTLVQDQLSLVRAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
VDYNINLHRYYVAKNALFEEYGVDRAKLLPENL
HCCCEEEEEEEHHHHHHHHHHCCCHHHHCCCCC
>Mature Secondary Structure
MERRSWVSSGLILFISFGLLAAESDPKGFTLSLKDAVQYAIENNREVLQARLELAKADSN
CCCHHHHHCCHHHHHHHHHHEECCCCCCEEEEHHHHHHHHHHCCHHHHHHHHHHHHCCCH
LMKYEAKYSWRAISRAEIDQKKFPFNQNNIFTGTKTQTNTYSAGIEKLFTTGTYFKLEAR
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHCCCCEEEEECH
SQRFDSNAFENPNQTPAGFTALGLPPLYTDSLSVTIAQDLLKNAFGANERNMEKILENQT
HHHCCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
EIMREQMEDQVASKVVSTLVDYWNYSVKESGFQTFEQLLKNTKNVRDLTIRKQGLGLSES
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHEEHHCCCCCCCC
FEVNQWNALLSQVEGQMAQATAEKEEARRKLIRSLNLPEDTVFQKTTPLSEVLPEKLDYQ
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCHHHHHHHHCCCC
ADIDYAYKHRADFRAIQRKKENAELAMKMAKNEALPSLKAAGTYGYQAQNTISPQNNYSD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCCCCCCCCCC
GRQGVLSYQYPVMQGSLDLSYPIMDKGVKVGIRDAEIQRRQVSLEEADLVKAVSDDVKTR
CCCCCEEEECCEEECCCCCCCCHHCCCCEECCCHHHHHHHHHCHHHHHHHHHHHHHHHHH
IDILKASYRVMENAKRTEEESKKYYNGVLRSFQQGRFNALAVKNALDTLVQDQLSLVRAK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
VDYNINLHRYYVAKNALFEEYGVDRAKLLPENL
HCCCEEEEEEEHHHHHHHHHHCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA