The gene/protein map for NC_010602 is currently unavailable.
Definition Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence.
Accession NC_010602
Length 3,599,677

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The map label for this gene is oppF [C]

Identifier: 183221314

GI number: 183221314

Start: 2018344

End: 2019132

Strand: Reverse

Name: oppF [C]

Synonym: LEPBI_I1931

Alternate gene names: 183221314

Gene position: 2019132-2018344 (Counterclockwise)

Preceding gene: 183221317

Following gene: 183221312

Centisome position: 56.09

GC content: 36.76

Gene sequence:

>789_bases
ATGTTTAGAATCAAAAATCTTTCCCTGACCATTCGGAACCAAATCCTTTTAAAAGAGATCCATTTAGAAGCTAAATCGAA
TCAAATCACTGGCCTCATTGGAAGGTCTGGTTCAGGAAAATCGACTCTCTTTCGATTGGCTCTTGGCCTCCTTCCCAAAG
TGAAAGGTTATCAATGGAAGGGGCAGATGGACTGGAATGGGATCAGTTTAGGCAAGGAAATGAATCCGAAACTGCAGCCT
GTATTCCAAGATCCATTTGGAAGTTTTTCTCCCTTTGGAACCATGGGTGAGTTATTACTGGAACCAATTCGAATCCAAAA
GAATCTTTTTTTGAATCACAAAGAAAAAACAGAAGCAGAAAATCAAATCAAGGTTTTTTGCGAAAAATTTGACTTACCAA
TCTCTCTATTAAGTAAAACAAAACAAGAGTTAAGTGGTGGTCAGCTTCAAAGATTCGCAATCCTTCGTGCGATACTATTA
AAGCCAGAATTTTTGCTTTTAGATGAACCGGTGACTGCCCTCGATGTCCTGGTTCAAAAAAAAATTGCAGAAGAATTAAA
ATCCATCAATCTAGAAAATAAATTGGGAATGCTCATTGTTTCGCATGATTTAGGATTTTTATCTTATATGTGTGATGAGA
TTTTTGTTTTGGAAGATGGGGTGATCACAGAATTTGGAAACCCAAAATTGTTGTTAAAAGACCCAAAATCAAATCTTTTA
AAGGAATTGATACAATCCAGAGATCATTCGTTTGGTGGTGCGACTTCTTCTTCAGAATCATCCAATTGA

Upstream 100 bases:

>100_bases
CTTCTGTGATTTTTACTTTCTCCAATTCTTGTTCTCCTTCATCTACCAATCATTGTTGTTTGGAAAAATGAGAATGCAAT
GATTTTATCGAATTCAAAAT

Downstream 100 bases:

>100_bases
GTGCGTTTTGCTTCAGCAAATTTTTTCGCAATGTCTCTTCTCCTTGCGATCACCTTTGAGGATACTGTCGCAAAGAATGG
ATCATTGGCAAAACTCAACA

Product: ABC transporter ATP binding protein

Products: ADP; phosphate; oligopeptides [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MFRIKNLSLTIRNQILLKEIHLEAKSNQITGLIGRSGSGKSTLFRLALGLLPKVKGYQWKGQMDWNGISLGKEMNPKLQP
VFQDPFGSFSPFGTMGELLLEPIRIQKNLFLNHKEKTEAENQIKVFCEKFDLPISLLSKTKQELSGGQLQRFAILRAILL
KPEFLLLDEPVTALDVLVQKKIAEELKSINLENKLGMLIVSHDLGFLSYMCDEIFVLEDGVITEFGNPKLLLKDPKSNLL
KELIQSRDHSFGGATSSSESSN

Sequences:

>Translated_262_residues
MFRIKNLSLTIRNQILLKEIHLEAKSNQITGLIGRSGSGKSTLFRLALGLLPKVKGYQWKGQMDWNGISLGKEMNPKLQP
VFQDPFGSFSPFGTMGELLLEPIRIQKNLFLNHKEKTEAENQIKVFCEKFDLPISLLSKTKQELSGGQLQRFAILRAILL
KPEFLLLDEPVTALDVLVQKKIAEELKSINLENKLGMLIVSHDLGFLSYMCDEIFVLEDGVITEFGNPKLLLKDPKSNLL
KELIQSRDHSFGGATSSSESSN
>Mature_262_residues
MFRIKNLSLTIRNQILLKEIHLEAKSNQITGLIGRSGSGKSTLFRLALGLLPKVKGYQWKGQMDWNGISLGKEMNPKLQP
VFQDPFGSFSPFGTMGELLLEPIRIQKNLFLNHKEKTEAENQIKVFCEKFDLPISLLSKTKQELSGGQLQRFAILRAILL
KPEFLLLDEPVTALDVLVQKKIAEELKSINLENKLGMLIVSHDLGFLSYMCDEIFVLEDGVITEFGNPKLLLKDPKSNLL
KELIQSRDHSFGGATSSSESSN

Specific function: Probably part of an ABC transporter complex that could be involved in peptide import. Probably responsible for energy coupling to the transport system [H]

COG id: COG4172

COG function: function code R; ABC-type uncharacterized transport system, duplicated ATPase component

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI89111135, Length=248, Percent_Identity=25.8064516129032, Blast_Score=75, Evalue=5e-14,
Organism=Homo sapiens, GI171184400, Length=241, Percent_Identity=29.4605809128631, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI42741659, Length=239, Percent_Identity=30.5439330543933, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI21729873, Length=231, Percent_Identity=26.4069264069264, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI15149474, Length=231, Percent_Identity=26.4069264069264, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI108773784, Length=216, Percent_Identity=26.3888888888889, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI108773782, Length=216, Percent_Identity=26.3888888888889, Blast_Score=69, Evalue=5e-12,
Organism=Homo sapiens, GI255708477, Length=244, Percent_Identity=27.4590163934426, Blast_Score=69, Evalue=6e-12,
Organism=Escherichia coli, GI1787500, Length=235, Percent_Identity=28.936170212766, Blast_Score=122, Evalue=3e-29,
Organism=Escherichia coli, GI1789891, Length=215, Percent_Identity=33.953488372093, Blast_Score=119, Evalue=3e-28,
Organism=Escherichia coli, GI1788506, Length=241, Percent_Identity=29.4605809128631, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI1789890, Length=257, Percent_Identity=28.7937743190661, Blast_Score=110, Evalue=8e-26,
Organism=Escherichia coli, GI1787758, Length=231, Percent_Identity=29.8701298701299, Blast_Score=107, Evalue=6e-25,
Organism=Escherichia coli, GI48994883, Length=250, Percent_Identity=29.2, Blast_Score=105, Evalue=3e-24,
Organism=Escherichia coli, GI1787759, Length=240, Percent_Identity=28.3333333333333, Blast_Score=104, Evalue=5e-24,
Organism=Escherichia coli, GI1789963, Length=240, Percent_Identity=27.0833333333333, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1789962, Length=221, Percent_Identity=30.316742081448, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI145693107, Length=231, Percent_Identity=27.2727272727273, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1787029, Length=254, Percent_Identity=30.3149606299213, Blast_Score=100, Evalue=8e-23,
Organism=Escherichia coli, GI1788225, Length=251, Percent_Identity=30.2788844621514, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1788761, Length=245, Percent_Identity=28.5714285714286, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1789672, Length=240, Percent_Identity=28.3333333333333, Blast_Score=88, Evalue=7e-19,
Organism=Escherichia coli, GI1787370, Length=225, Percent_Identity=32.4444444444444, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1787547, Length=268, Percent_Identity=23.8805970149254, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1789032, Length=241, Percent_Identity=26.5560165975104, Blast_Score=84, Evalue=9e-18,
Organism=Escherichia coli, GI48994997, Length=232, Percent_Identity=25.4310344827586, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1786398, Length=235, Percent_Identity=30.2127659574468, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI87081709, Length=241, Percent_Identity=25.3112033195021, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1790162, Length=259, Percent_Identity=27.7992277992278, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI87081791, Length=257, Percent_Identity=26.0700389105058, Blast_Score=81, Evalue=8e-17,
Organism=Escherichia coli, GI1788165, Length=238, Percent_Identity=27.3109243697479, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1786872, Length=251, Percent_Identity=27.4900398406374, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI87082267, Length=234, Percent_Identity=27.7777777777778, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1787712, Length=232, Percent_Identity=28.448275862069, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1790467, Length=258, Percent_Identity=27.906976744186, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1787164, Length=211, Percent_Identity=28.9099526066351, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1788644, Length=179, Percent_Identity=30.1675977653631, Blast_Score=75, Evalue=4e-15,
Organism=Escherichia coli, GI1786703, Length=215, Percent_Identity=32.093023255814, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI1790739, Length=230, Percent_Identity=28.2608695652174, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1787089, Length=237, Percent_Identity=27.4261603375527, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI1788450, Length=245, Percent_Identity=23.265306122449, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI48994943, Length=262, Percent_Identity=21.3740458015267, Blast_Score=68, Evalue=8e-13,
Organism=Escherichia coli, GI1787548, Length=245, Percent_Identity=25.7142857142857, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1789751, Length=225, Percent_Identity=24.8888888888889, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1788053, Length=208, Percent_Identity=29.8076923076923, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1786253, Length=222, Percent_Identity=28.3783783783784, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1786319, Length=222, Percent_Identity=26.1261261261261, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1787113, Length=218, Percent_Identity=29.8165137614679, Blast_Score=62, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI71992285, Length=240, Percent_Identity=30.8333333333333, Blast_Score=81, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI193208177, Length=245, Percent_Identity=28.5714285714286, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI25146777, Length=236, Percent_Identity=28.3898305084746, Blast_Score=78, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17551700, Length=257, Percent_Identity=26.8482490272374, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17551702, Length=257, Percent_Identity=26.8482490272374, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17569081, Length=229, Percent_Identity=28.82096069869, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI212646699, Length=225, Percent_Identity=28.8888888888889, Blast_Score=74, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI17569143, Length=228, Percent_Identity=29.3859649122807, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI193211017, Length=236, Percent_Identity=29.6610169491525, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI193211015, Length=236, Percent_Identity=29.6610169491525, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17558664, Length=261, Percent_Identity=27.5862068965517, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI71996809, Length=236, Percent_Identity=29.2372881355932, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI71992080, Length=243, Percent_Identity=29.6296296296296, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI71992066, Length=243, Percent_Identity=29.6296296296296, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI25146765, Length=243, Percent_Identity=29.6296296296296, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71992070, Length=243, Percent_Identity=29.6296296296296, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI86564969, Length=243, Percent_Identity=29.6296296296296, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI193202349, Length=229, Percent_Identity=28.82096069869, Blast_Score=65, Evalue=3e-11,
Organism=Caenorhabditis elegans, GI115534520, Length=218, Percent_Identity=27.9816513761468, Blast_Score=64, Evalue=9e-11,
Organism=Saccharomyces cerevisiae, GI6320296, Length=197, Percent_Identity=28.4263959390863, Blast_Score=69, Evalue=6e-13,
Organism=Saccharomyces cerevisiae, GI6323217, Length=259, Percent_Identity=27.4131274131274, Blast_Score=68, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6320339, Length=229, Percent_Identity=29.2576419213974, Blast_Score=66, Evalue=7e-12,
Organism=Drosophila melanogaster, GI85726357, Length=239, Percent_Identity=28.4518828451883, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI45552345, Length=232, Percent_Identity=28.448275862069, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI45552335, Length=232, Percent_Identity=28.448275862069, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI45552341, Length=232, Percent_Identity=28.448275862069, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI45552359, Length=232, Percent_Identity=28.448275862069, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI45552339, Length=232, Percent_Identity=28.448275862069, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI45550972, Length=232, Percent_Identity=28.448275862069, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI45552357, Length=232, Percent_Identity=28.448275862069, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI45552343, Length=232, Percent_Identity=28.448275862069, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI45552347, Length=232, Percent_Identity=28.448275862069, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI45552361, Length=232, Percent_Identity=28.448275862069, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI45552337, Length=232, Percent_Identity=28.448275862069, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI45552349, Length=232, Percent_Identity=28.448275862069, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI45552363, Length=232, Percent_Identity=28.448275862069, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI45552353, Length=232, Percent_Identity=28.448275862069, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24583969, Length=232, Percent_Identity=28.448275862069, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI45552351, Length=232, Percent_Identity=28.448275862069, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI45552355, Length=232, Percent_Identity=28.448275862069, Blast_Score=68, Evalue=7e-12,
Organism=Drosophila melanogaster, GI281363262, Length=226, Percent_Identity=29.646017699115, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24653245, Length=226, Percent_Identity=29.646017699115, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI28574744, Length=209, Percent_Identity=27.2727272727273, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24661270, Length=196, Percent_Identity=27.0408163265306, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI21355589, Length=196, Percent_Identity=27.0408163265306, Blast_Score=65, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR010066
- InterPro:   IPR013563 [H]

Pfam domain/function: PF00005 ABC_tran; PF08352 oligo_HPY [H]

EC number: NA

Molecular weight: Translated: 29428; Mature: 29428

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MFRIKNLSLTIRNQILLKEIHLEAKSNQITGLIGRSGSGKSTLFRLALGLLPKVKGYQWK
CEEEECEEEEHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEC
GQMDWNGISLGKEMNPKLQPVFQDPFGSFSPFGTMGELLLEPIRIQKNLFLNHKEKTEAE
CCCCCCCEECCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH
NQIKVFCEKFDLPISLLSKTKQELSGGQLQRFAILRAILLKPEFLLLDEPVTALDVLVQK
HHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHH
KIAEELKSINLENKLGMLIVSHDLGFLSYMCDEIFVLEDGVITEFGNPKLLLKDPKSNLL
HHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHEEEECCCEEEECCCCEEEEECCHHHHH
KELIQSRDHSFGGATSSSESSN
HHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFRIKNLSLTIRNQILLKEIHLEAKSNQITGLIGRSGSGKSTLFRLALGLLPKVKGYQWK
CEEEECEEEEHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEC
GQMDWNGISLGKEMNPKLQPVFQDPFGSFSPFGTMGELLLEPIRIQKNLFLNHKEKTEAE
CCCCCCCEECCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH
NQIKVFCEKFDLPISLLSKTKQELSGGQLQRFAILRAILLKPEFLLLDEPVTALDVLVQK
HHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHH
KIAEELKSINLENKLGMLIVSHDLGFLSYMCDEIFVLEDGVITEFGNPKLLLKDPKSNLL
HHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHEEEECCCEEEECCCCEEEEECCHHHHH
KELIQSRDHSFGGATSSSESSN
HHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; oligopeptides [Periplasm]; H2O [C]

Specific reaction: ATP + oligopeptides [Periplasm] + H2O = ADP + phosphate + oligopeptides [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA