| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is yceA [C]
Identifier: 183221287
GI number: 183221287
Start: 1996515
End: 1997546
Strand: Direct
Name: yceA [C]
Synonym: LEPBI_I1904
Alternate gene names: 183221287
Gene position: 1996515-1997546 (Clockwise)
Preceding gene: 183221286
Following gene: 183221288
Centisome position: 55.46
GC content: 38.08
Gene sequence:
>1032_bases ATGAAAAAGTTTTTATTCAATCGTTACGATAAAGAAACTCTCAAAAAGAAAGTATTAGAAGACAAACGGGAAAGGAGAGT GATTTCCTTTTATCGTTATGTGAAAATTACAGATCCAATTGCGTTTCGAGATGTTTTATATGATTCATTGGAAGATTTGG GAGTTCTTGGAAGGATCTATTTGGCAAACGAAGGGATCAACGCACAATTCTCCATTCCTATCGGAAACTATGACGCCTTA CGAAAGTTTGTGGATTTCATTCCTGAGTTAAAGAATATTTATTTTAATGATGCAGTGGAAGATAAAAAGGAAAGTTTCAT CAAACTTGCGATCAAAGTAAGAAAAAAAATTGTCGCTGATGGCCTAGACGATAGCCAATTTGATCCTTCCAATGTAGGCA CTCATCTCTCTCCACTGGAATTCCACCAAGCACTAGAAGAAGACGGTGTCATCGTAGTTGACTTACGAAATAATTACGAA TCAGAAGTGGGTCATTTTGAAAACGCGATTTTACCTGATGTCGGAACCTTCCGCGAAGAACTACCACTCGTCGAACAAAT CTTAGAAAAAGACAAAGATAAAAAAATCCTACTCTATTGTACGGGTGGGATTCGCTGCGAAAAAGCTAGTGCCTATTTAA AGTACAAAGGATTTGAAAAGGTACACCAACTCCAAGGTGGTATCATTAATTATGCAAAAGCCGTCACTGACCATGGTTTG AAATCCAAATTCAAAGGGAAAAATTTTGTATTTGATGATCGGCTTGGGGAACGGATCACCGATGATGTTTTGACAGTCTG TTACACTTGTGGGAATCCATCTGATAGACACACCAACTGCGCCAACTTAGGATGCCATGTTCTCATCGTTCAGTGTGAGT CTTGTTCGGAAAAACTTCTTGGAACATGTTCAGAAGAATGTAAGGAAATTGTTTCTTTACCGGAAGAAACACAAAAGAAA CTCAGACAAGAACAAAGAAAACAACAGAAATACCCCACTCACCACCTAACAAGAAAGCTCGTAGGAAAATAA
Upstream 100 bases:
>100_bases ATGATTATTTAGGAATGATTTACATCCACCCTGCCATTTCGGAAATCACAAGGAATGCCTTTCGTAAGGTTCGGGAACAA AAACTAAAGGAAATCAAATC
Downstream 100 bases:
>100_bases ATGAAACCATATGCCATTGAACTAGAAGGATTAGAAAAAACATACAAAAACGGGGTAAAAGCCCTCCGTTCGATCAATTT AAAAGTGGAAGCAGGAGATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MKKFLFNRYDKETLKKKVLEDKRERRVISFYRYVKITDPIAFRDVLYDSLEDLGVLGRIYLANEGINAQFSIPIGNYDAL RKFVDFIPELKNIYFNDAVEDKKESFIKLAIKVRKKIVADGLDDSQFDPSNVGTHLSPLEFHQALEEDGVIVVDLRNNYE SEVGHFENAILPDVGTFREELPLVEQILEKDKDKKILLYCTGGIRCEKASAYLKYKGFEKVHQLQGGIINYAKAVTDHGL KSKFKGKNFVFDDRLGERITDDVLTVCYTCGNPSDRHTNCANLGCHVLIVQCESCSEKLLGTCSEECKEIVSLPEETQKK LRQEQRKQQKYPTHHLTRKLVGK
Sequences:
>Translated_343_residues MKKFLFNRYDKETLKKKVLEDKRERRVISFYRYVKITDPIAFRDVLYDSLEDLGVLGRIYLANEGINAQFSIPIGNYDAL RKFVDFIPELKNIYFNDAVEDKKESFIKLAIKVRKKIVADGLDDSQFDPSNVGTHLSPLEFHQALEEDGVIVVDLRNNYE SEVGHFENAILPDVGTFREELPLVEQILEKDKDKKILLYCTGGIRCEKASAYLKYKGFEKVHQLQGGIINYAKAVTDHGL KSKFKGKNFVFDDRLGERITDDVLTVCYTCGNPSDRHTNCANLGCHVLIVQCESCSEKLLGTCSEECKEIVSLPEETQKK LRQEQRKQQKYPTHHLTRKLVGK >Mature_343_residues MKKFLFNRYDKETLKKKVLEDKRERRVISFYRYVKITDPIAFRDVLYDSLEDLGVLGRIYLANEGINAQFSIPIGNYDAL RKFVDFIPELKNIYFNDAVEDKKESFIKLAIKVRKKIVADGLDDSQFDPSNVGTHLSPLEFHQALEEDGVIVVDLRNNYE SEVGHFENAILPDVGTFREELPLVEQILEKDKDKKILLYCTGGIRCEKASAYLKYKGFEKVHQLQGGIINYAKAVTDHGL KSKFKGKNFVFDDRLGERITDDVLTVCYTCGNPSDRHTNCANLGCHVLIVQCESCSEKLLGTCSEECKEIVSLPEETQKK LRQEQRKQQKYPTHHLTRKLVGK
Specific function: Unknown. [C]
COG id: COG1054
COG function: function code R; Predicted sulfurtransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 rhodanese domain [H]
Homologues:
Organism=Homo sapiens, GI111038120, Length=309, Percent_Identity=33.0097087378641, Blast_Score=152, Evalue=6e-37, Organism=Escherichia coli, GI1787294, Length=327, Percent_Identity=49.2354740061162, Blast_Score=339, Evalue=1e-94,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001763 - InterPro: IPR020936 [H]
Pfam domain/function: PF00581 Rhodanese [H]
EC number: NA
Molecular weight: Translated: 39441; Mature: 39441
Theoretical pI: Translated: 7.69; Mature: 7.69
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKFLFNRYDKETLKKKVLEDKRERRVISFYRYVKITDPIAFRDVLYDSLEDLGVLGRIY CCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHEEE LANEGINAQFSIPIGNYDALRKFVDFIPELKNIYFNDAVEDKKESFIKLAIKVRKKIVAD EECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHC GLDDSQFDPSNVGTHLSPLEFHQALEEDGVIVVDLRNNYESEVGHFENAILPDVGTFREE CCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEECCCCHHHHHHHHCCCCCCHHHHHHH LPLVEQILEKDKDKKILLYCTGGIRCEKASAYLKYKGFEKVHQLQGGIINYAKAVTDHGL HHHHHHHHHCCCCCEEEEEECCCCEECCHHHHHHHCCHHHHHHHHCCHHHHHHHHHHCCH KSKFKGKNFVFDDRLGERITDDVLTVCYTCGNPSDRHTNCANLGCHVLIVQCESCSEKLL HHHCCCCCCEECCHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCEEEEEEECHHHHHHHH GTCSEECKEIVSLPEETQKKLRQEQRKQQKYPTHHLTRKLVGK HHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCC >Mature Secondary Structure MKKFLFNRYDKETLKKKVLEDKRERRVISFYRYVKITDPIAFRDVLYDSLEDLGVLGRIY CCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHEEE LANEGINAQFSIPIGNYDALRKFVDFIPELKNIYFNDAVEDKKESFIKLAIKVRKKIVAD EECCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHC GLDDSQFDPSNVGTHLSPLEFHQALEEDGVIVVDLRNNYESEVGHFENAILPDVGTFREE CCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEECCCCHHHHHHHHCCCCCCHHHHHHH LPLVEQILEKDKDKKILLYCTGGIRCEKASAYLKYKGFEKVHQLQGGIINYAKAVTDHGL HHHHHHHHHCCCCCEEEEEECCCCEECCHHHHHHHCCHHHHHHHHCCHHHHHHHHHHCCH KSKFKGKNFVFDDRLGERITDDVLTVCYTCGNPSDRHTNCANLGCHVLIVQCESCSEKLL HHHCCCCCCEECCHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCEEEEEEECHHHHHHHH GTCSEECKEIVSLPEETQKKLRQEQRKQQKYPTHHLTRKLVGK HHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA