| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
Click here to switch to the map view.
The map label for this gene is 183221284
Identifier: 183221284
GI number: 183221284
Start: 1993845
End: 1994237
Strand: Direct
Name: 183221284
Synonym: LEPBI_I1901
Alternate gene names: NA
Gene position: 1993845-1994237 (Clockwise)
Preceding gene: 183221283
Following gene: 183221285
Centisome position: 55.39
GC content: 39.95
Gene sequence:
>393_bases ATGACAATTCTCATCATTTGCCTTTTGGTTTCAATCGCCCAAATCTACATTGCAAAAGCCTTTGTGGCAATTGCAATGGC ACGCGAAGGAAAGGGGTATGACAACCACCACCCTCGTATGCAACAATCCAAACTCACTGGATGGGGGGCGCGTGCCTATG CTGCTCATCAAAATGGTTTTGAAGCCTTCGCTATGTTTGCTTGTGGTGTCTTACTCAATTTACTTTTAGAAGTTGATTTG TATTTTGCGGAAATTCTAACATTAAGTTTTGTAACCCTTCGATTTTTATACATTTACCTCTACATAGCTGACTTTTCCTA TGCTCGTTCTACCATTTGGGTCATTGCCTTCCTTTGTAATTTGGGATTGTACATTTTGCCATTCATGTATTAA
Upstream 100 bases:
>100_bases CACTGATGATAGGTCCATTTTTTTACGCTTACGAAAACTAAGGGATCGTTGGTAAAATTTTCATTTTACATTTTTAAAAT CTCCTTTTAGGATTTGTTAT
Downstream 100 bases:
>100_bases GGTTCCCTTTGCAAAAGTTTTTGTATTCTGTTTTACTGCTGTTATTCCTTTGTTTGGCGTATACCCTGCTTTCAGAAAAA AAAGGAGACGGAATCGAAAA
Product: putative signal peptide
Products: NA
Alternate protein names: Signal Peptide
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MTILIICLLVSIAQIYIAKAFVAIAMAREGKGYDNHHPRMQQSKLTGWGARAYAAHQNGFEAFAMFACGVLLNLLLEVDL YFAEILTLSFVTLRFLYIYLYIADFSYARSTIWVIAFLCNLGLYILPFMY
Sequences:
>Translated_130_residues MTILIICLLVSIAQIYIAKAFVAIAMAREGKGYDNHHPRMQQSKLTGWGARAYAAHQNGFEAFAMFACGVLLNLLLEVDL YFAEILTLSFVTLRFLYIYLYIADFSYARSTIWVIAFLCNLGLYILPFMY >Mature_129_residues TILIICLLVSIAQIYIAKAFVAIAMAREGKGYDNHHPRMQQSKLTGWGARAYAAHQNGFEAFAMFACGVLLNLLLEVDLY FAEILTLSFVTLRFLYIYLYIADFSYARSTIWVIAFLCNLGLYILPFMY
Specific function: Unknown
COG id: COG3686
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14826; Mature: 14695
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTILIICLLVSIAQIYIAKAFVAIAMAREGKGYDNHHPRMQQSKLTGWGARAYAAHQNGF CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCHHHHHHHHCCH EAFAMFACGVLLNLLLEVDLYFAEILTLSFVTLRFLYIYLYIADFSYARSTIWVIAFLCN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGLYILPFMY HHHHHHHHCC >Mature Secondary Structure TILIICLLVSIAQIYIAKAFVAIAMAREGKGYDNHHPRMQQSKLTGWGARAYAAHQNGF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCHHHHHHHHCCH EAFAMFACGVLLNLLLEVDLYFAEILTLSFVTLRFLYIYLYIADFSYARSTIWVIAFLCN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGLYILPFMY HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA