| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is fecA [H]
Identifier: 183221267
GI number: 183221267
Start: 1976301
End: 1978772
Strand: Reverse
Name: fecA [H]
Synonym: LEPBI_I1883
Alternate gene names: 183221267
Gene position: 1978772-1976301 (Counterclockwise)
Preceding gene: 183221269
Following gene: 183221265
Centisome position: 54.97
GC content: 42.11
Gene sequence:
>2472_bases ATGAAAATGAAACTACTTCTCAATTCAAAATACTACCTGATTCTGGTCTTCGTCCTAACATTCCACACTGTATTGGCGCA GGAACCAAATACACAAAATCCTCCGCAAGCGACAGAGAACCCAAATCCAAACCCTGCCTCAGAGGAAACAATTCCTGAAG AGAATCCAGAAGATCCGAAATGGAAGAAAGCAGAAATTCGAGTGATCGGAGATAAAAAAGACCTAAAACGAATCCCAGGT TCTGCAACCATCATCACGAAAAAGGAATTAGAAGAATCTCGTCCGACAGACAATATGGAAATCTTGAGAAGGGTCCCTGG TGCCAACATTCGGTACCAAGACCCAGCGGGGCTCACCATGAATTTAGGATTTCGTGGTGTGAGTGGAGAAGTCTCTCGGA AGGTTTTGGTTTTGGAAGATGGACTCTTTACCTCTCTCAATCCTTATGGGGAACCGGAAATGTACTACACACCTTCCATC GAGCGAATGGAAAGGATTGAAATTGTAAAGGGCTCCGGATCCATTTTGTTTGGACCTTCTACCATTGGAGGGGTGGTCAA TTTCATCACTAGAAAACCTCCCAAAGACCCAAAATTAACCTTACAAACGATTGGCGGAGAAAACGCATACTTTAGCCAAA TGGTCAATTATGGTGGAACCTTTGGGAATACTGGTTTTGATGTGAATGTACTCCGCAAACAAGGTGACGGGTTTCGTGCC CACCAAGGATATTTTGTCAACGAGGCAAATGTTAAAACCATACACCAGTTAAATGATAAAAATAACATCACAACTAAAAT TGGATTTCACCAACAAGAATCCCAAGCGACCTATGTTGGTTTGACCACTGGAATGTTTAATAACAATCCCAAAGACAACC CAGCACAAAATGATAAACGTTCAATTGAACGATATAGTTTTTCGATTGGGCATGAGTATACCTTCTCAGAAAAAACGAAA CTCATCACAAGGGTTTATTCCGCATATACAGAAAGGAACTGGGCAAGACAAAACTATGCAAGAAATTCGAGAGGTAGTTC AATCCCTTCGGACGCACTGGCAACATACGATGGTGAACCGTATACCAGTCGTAACAGCGATACCATTTGGATGCGCGGAA CCAATGCACACCGAGATCGAACCTATAAATTTGCCGGTATCGAATCAAAATTACAAACAGAACTAGAAACAGGTTCGATT AAACATGAAATTGATTTGGGAGTTCGTTACCATATCGATATGGCAAAGGTGCAACTCTTAAATGGGCCTGTGACTCCTGA TTTTGTTTTGTATCCCAATGGACCCGGAACTTCTGCTGTGGTTCTGCAGTCCCAAACAAGCCTGGCAACAAGTGGGGAAC TGAGAGATGATGAACGTAGGTCTGCAAAAGCAGTATCTGTTTATTTCCAAGACCGCATTCGTCTCACTGACAAATTTTCA ATCATCCCTGGTGTTCGTTACGAGTCATTTTCACAGACCCGTTCCATCAATCGAGGGAGAAGGGATTTTAATCCCGTTAC ATTTGATTATGCGAGTGGAACAAACCCAACAGTACAATTGGACAAAACGGCATCCACAAGAAACCAAATTGTCCTTCCTG GATTTGGAACCACACTTGATTTTGCACGGAACTTAACTTGGTTTACGGGAGTCCACCGCGGATTTTCTCCTCCTCGGTAT GAATCCGCGATTTCCCCAACCGCAGAAGATTTGGTCTTAAAACCAGAAAGGTCTTGGAACTACGAAACGGGTGTTAGGGG GGATATCACAGAGTATTTGAGTGGCCAACTTGTTGGATACTTACTCAATTTTGAAGACCAAATCATCAATAGTTCTGCCG CTGGTGGAAATTTAGGTTCAAGACCAGTCAATGCAGGTAGGTCCATCCGCAGAGGTGTTGAGACCAATATGACCTTCGAT TTTGGGCAATTTTGGAAATGGAATTACAACGTTCCTCTTGATATTATTTATACTCGCACAGAAGCCAAGTCGAACCAATA CACATATAACCTAACGGAATGGACGAGAGGGAATACAAATCCATTGGTTCATATTGATACAAACGGAAATAGACTTCCTT ATGTATCACGGGATATCTTAACTTTATCCATTGGAATTTCCAGCCGAAGTACTGGATTTTATGCGAGAGTAGAATGGCAG TACTTTTCCAAACAATTCCATGACTTAGAAAATTCAAAATCAGTGTATTGGTATGATTCTGTCGGAACATCGACCGATAA TCGACTTTTACTCAGTTATGCGGGTATCAAATCGGATGCATCGGGACTAGATGGAGAAATCCCTGCCTATGAACTTGTGA ACGCAAATATTGGGTATAAAAAAGACAATTGGTCAGTTTTTGTTTCGGGCAAAAACTTACAGGATAGAAAATACATTTCT TCAAGACTCCCAGAAGGGATCCAACCTGGTCCCTTCCGGCAAGTGAACTTTGGTGTGACCTTACAACTTTAA
Upstream 100 bases:
>100_bases CCATCCAGTGTAATTTTTTTTCCATTCCCGAACCTTCCGTTTTTTTTTTACTTGTTTCTGAGCGTGCTAAATGAACCGTT GTCTCAAAATCAAAATCTAT
Downstream 100 bases:
>100_bases ACTAGATGCTTCTGGAATCGCAGCAGAAGGTTTCATAAACAGATAACCTTGGGAATATTCAATTCCCAAGGATTCCACTA AGTCTTGTATGGCGGGGCGA
Product: Iron(III) dicitrate TonB-dependent receptor
Products: NA
Alternate protein names: Iron(III) dicitrate transport protein fecA [H]
Number of amino acids: Translated: 823; Mature: 823
Protein sequence:
>823_residues MKMKLLLNSKYYLILVFVLTFHTVLAQEPNTQNPPQATENPNPNPASEETIPEENPEDPKWKKAEIRVIGDKKDLKRIPG SATIITKKELEESRPTDNMEILRRVPGANIRYQDPAGLTMNLGFRGVSGEVSRKVLVLEDGLFTSLNPYGEPEMYYTPSI ERMERIEIVKGSGSILFGPSTIGGVVNFITRKPPKDPKLTLQTIGGENAYFSQMVNYGGTFGNTGFDVNVLRKQGDGFRA HQGYFVNEANVKTIHQLNDKNNITTKIGFHQQESQATYVGLTTGMFNNNPKDNPAQNDKRSIERYSFSIGHEYTFSEKTK LITRVYSAYTERNWARQNYARNSRGSSIPSDALATYDGEPYTSRNSDTIWMRGTNAHRDRTYKFAGIESKLQTELETGSI KHEIDLGVRYHIDMAKVQLLNGPVTPDFVLYPNGPGTSAVVLQSQTSLATSGELRDDERRSAKAVSVYFQDRIRLTDKFS IIPGVRYESFSQTRSINRGRRDFNPVTFDYASGTNPTVQLDKTASTRNQIVLPGFGTTLDFARNLTWFTGVHRGFSPPRY ESAISPTAEDLVLKPERSWNYETGVRGDITEYLSGQLVGYLLNFEDQIINSSAAGGNLGSRPVNAGRSIRRGVETNMTFD FGQFWKWNYNVPLDIIYTRTEAKSNQYTYNLTEWTRGNTNPLVHIDTNGNRLPYVSRDILTLSIGISSRSTGFYARVEWQ YFSKQFHDLENSKSVYWYDSVGTSTDNRLLLSYAGIKSDASGLDGEIPAYELVNANIGYKKDNWSVFVSGKNLQDRKYIS SRLPEGIQPGPFRQVNFGVTLQL
Sequences:
>Translated_823_residues MKMKLLLNSKYYLILVFVLTFHTVLAQEPNTQNPPQATENPNPNPASEETIPEENPEDPKWKKAEIRVIGDKKDLKRIPG SATIITKKELEESRPTDNMEILRRVPGANIRYQDPAGLTMNLGFRGVSGEVSRKVLVLEDGLFTSLNPYGEPEMYYTPSI ERMERIEIVKGSGSILFGPSTIGGVVNFITRKPPKDPKLTLQTIGGENAYFSQMVNYGGTFGNTGFDVNVLRKQGDGFRA HQGYFVNEANVKTIHQLNDKNNITTKIGFHQQESQATYVGLTTGMFNNNPKDNPAQNDKRSIERYSFSIGHEYTFSEKTK LITRVYSAYTERNWARQNYARNSRGSSIPSDALATYDGEPYTSRNSDTIWMRGTNAHRDRTYKFAGIESKLQTELETGSI KHEIDLGVRYHIDMAKVQLLNGPVTPDFVLYPNGPGTSAVVLQSQTSLATSGELRDDERRSAKAVSVYFQDRIRLTDKFS IIPGVRYESFSQTRSINRGRRDFNPVTFDYASGTNPTVQLDKTASTRNQIVLPGFGTTLDFARNLTWFTGVHRGFSPPRY ESAISPTAEDLVLKPERSWNYETGVRGDITEYLSGQLVGYLLNFEDQIINSSAAGGNLGSRPVNAGRSIRRGVETNMTFD FGQFWKWNYNVPLDIIYTRTEAKSNQYTYNLTEWTRGNTNPLVHIDTNGNRLPYVSRDILTLSIGISSRSTGFYARVEWQ YFSKQFHDLENSKSVYWYDSVGTSTDNRLLLSYAGIKSDASGLDGEIPAYELVNANIGYKKDNWSVFVSGKNLQDRKYIS SRLPEGIQPGPFRQVNFGVTLQL >Mature_823_residues MKMKLLLNSKYYLILVFVLTFHTVLAQEPNTQNPPQATENPNPNPASEETIPEENPEDPKWKKAEIRVIGDKKDLKRIPG SATIITKKELEESRPTDNMEILRRVPGANIRYQDPAGLTMNLGFRGVSGEVSRKVLVLEDGLFTSLNPYGEPEMYYTPSI ERMERIEIVKGSGSILFGPSTIGGVVNFITRKPPKDPKLTLQTIGGENAYFSQMVNYGGTFGNTGFDVNVLRKQGDGFRA HQGYFVNEANVKTIHQLNDKNNITTKIGFHQQESQATYVGLTTGMFNNNPKDNPAQNDKRSIERYSFSIGHEYTFSEKTK LITRVYSAYTERNWARQNYARNSRGSSIPSDALATYDGEPYTSRNSDTIWMRGTNAHRDRTYKFAGIESKLQTELETGSI KHEIDLGVRYHIDMAKVQLLNGPVTPDFVLYPNGPGTSAVVLQSQTSLATSGELRDDERRSAKAVSVYFQDRIRLTDKFS IIPGVRYESFSQTRSINRGRRDFNPVTFDYASGTNPTVQLDKTASTRNQIVLPGFGTTLDFARNLTWFTGVHRGFSPPRY ESAISPTAEDLVLKPERSWNYETGVRGDITEYLSGQLVGYLLNFEDQIINSSAAGGNLGSRPVNAGRSIRRGVETNMTFD FGQFWKWNYNVPLDIIYTRTEAKSNQYTYNLTEWTRGNTNPLVHIDTNGNRLPYVSRDILTLSIGISSRSTGFYARVEWQ YFSKQFHDLENSKSVYWYDSVGTSTDNRLLLSYAGIKSDASGLDGEIPAYELVNANIGYKKDNWSVFVSGKNLQDRKYIS SRLPEGIQPGPFRQVNFGVTLQL
Specific function: FecA is the outer membrane receptor protein in the Fe(3+) dicitrate transport system [H]
COG id: COG4772
COG function: function code P; Outer membrane receptor for Fe3+-dicitrate
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1790743, Length=766, Percent_Identity=22.3237597911227, Blast_Score=115, Evalue=2e-26, Organism=Escherichia coli, GI1786344, Length=506, Percent_Identity=23.3201581027668, Blast_Score=66, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR011662 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF07660 STN; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 92774; Mature: 92774
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: PS00867 CPSASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKMKLLLNSKYYLILVFVLTFHTVLAQEPNTQNPPQATENPNPNPASEETIPEENPEDPK CEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC WKKAEIRVIGDKKDLKRIPGSATIITKKELEESRPTDNMEILRRVPGANIRYQDPAGLTM CCEEEEEEECCHHHHHHCCCCEEEEEHHHHHHCCCCCCHHHHHHCCCCCEEEECCCCEEE NLGFRGVSGEVSRKVLVLEDGLFTSLNPYGEPEMYYTPSIERMERIEIVKGSGSILFGPS ECCEECCCCCCCCEEEEEECCCCCCCCCCCCCCEEECCCHHHCEEEEEEECCCCEEECCH TIGGVVNFITRKPPKDPKLTLQTIGGENAYFSQMVNYGGTFGNTGFDVNVLRKQGDGFRA HHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCEEEEEEECCCCCEE HQGYFVNEANVKTIHQLNDKNNITTKIGFHQQESQATYVGLTTGMFNNNPKDNPAQNDKR CCCEEEECCCCHHHEECCCCCCEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHH SIERYSFSIGHEYTFSEKTKLITRVYSAYTERNWARQNYARNSRGSSIPSDALATYDGEP HHHHHEEECCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHEECCCCC YTSRNSDTIWMRGTNAHRDRTYKFAGIESKLQTELETGSIKHEIDLGVRYHIDMAKVQLL CCCCCCCEEEEECCCCCCCCEEEEECCCHHHHHHHHCCCEEEEEECCEEEEEEHEEEEEE NGPVTPDFVLYPNGPGTSAVVLQSQTSLATSGELRDDERRSAKAVSVYFQDRIRLTDKFS CCCCCCCEEEECCCCCCEEEEEECCCCCCCCCCCCCCHHHCCEEEEEEEECCEEEEEEEE IIPGVRYESFSQTRSINRGRRDFNPVTFDYASGTNPTVQLDKTASTRNQIVLPGFGTTLD ECCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEECCCCCCCEEEECCCCCHHH FARNLTWFTGVHRGFSPPRYESAISPTAEDLVLKPERSWNYETGVRGDITEYLSGQLVGY HHHCCHHHHHHHCCCCCCCHHHHCCCCHHHEEECCCCCCCCCCCCCCCHHHHHCCCEEEE LLNFEDQIINSSAAGGNLGSRPVNAGRSIRRGVETNMTFDFGQFWKWNYNVPLDIIYTRT EECCHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCEEEECCCCEEECCCCCEEEEEEEC EAKSNQYTYNLTEWTRGNTNPLVHIDTNGNRLPYVSRDILTLSIGISSRSTGFYARVEWQ CCCCCCEEEEECCCCCCCCCCEEEECCCCCCCCEEECCEEEEEEECCCCCCCEEEEEEHH YFSKQFHDLENSKSVYWYDSVGTSTDNRLLLSYAGIKSDASGLDGEIPAYELVNANIGYK HHHHHHHCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEECCCCEE KDNWSVFVSGKNLQDRKYISSRLPEGIQPGPFRQVNFGVTLQL CCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCEEEEECEEEEC >Mature Secondary Structure MKMKLLLNSKYYLILVFVLTFHTVLAQEPNTQNPPQATENPNPNPASEETIPEENPEDPK CEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC WKKAEIRVIGDKKDLKRIPGSATIITKKELEESRPTDNMEILRRVPGANIRYQDPAGLTM CCEEEEEEECCHHHHHHCCCCEEEEEHHHHHHCCCCCCHHHHHHCCCCCEEEECCCCEEE NLGFRGVSGEVSRKVLVLEDGLFTSLNPYGEPEMYYTPSIERMERIEIVKGSGSILFGPS ECCEECCCCCCCCEEEEEECCCCCCCCCCCCCCEEECCCHHHCEEEEEEECCCCEEECCH TIGGVVNFITRKPPKDPKLTLQTIGGENAYFSQMVNYGGTFGNTGFDVNVLRKQGDGFRA HHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCEEEEEEECCCCCEE HQGYFVNEANVKTIHQLNDKNNITTKIGFHQQESQATYVGLTTGMFNNNPKDNPAQNDKR CCCEEEECCCCHHHEECCCCCCEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCHHH SIERYSFSIGHEYTFSEKTKLITRVYSAYTERNWARQNYARNSRGSSIPSDALATYDGEP HHHHHEEECCCEEECCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHEECCCCC YTSRNSDTIWMRGTNAHRDRTYKFAGIESKLQTELETGSIKHEIDLGVRYHIDMAKVQLL CCCCCCCEEEEECCCCCCCCEEEEECCCHHHHHHHHCCCEEEEEECCEEEEEEHEEEEEE NGPVTPDFVLYPNGPGTSAVVLQSQTSLATSGELRDDERRSAKAVSVYFQDRIRLTDKFS CCCCCCCEEEECCCCCCEEEEEECCCCCCCCCCCCCCHHHCCEEEEEEEECCEEEEEEEE IIPGVRYESFSQTRSINRGRRDFNPVTFDYASGTNPTVQLDKTASTRNQIVLPGFGTTLD ECCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEECCCCCCCEEEECCCCCHHH FARNLTWFTGVHRGFSPPRYESAISPTAEDLVLKPERSWNYETGVRGDITEYLSGQLVGY HHHCCHHHHHHHCCCCCCCHHHHCCCCHHHEEECCCCCCCCCCCCCCCHHHHHCCCEEEE LLNFEDQIINSSAAGGNLGSRPVNAGRSIRRGVETNMTFDFGQFWKWNYNVPLDIIYTRT EECCHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCEEEECCCCEEECCCCCEEEEEEEC EAKSNQYTYNLTEWTRGNTNPLVHIDTNGNRLPYVSRDILTLSIGISSRSTGFYARVEWQ CCCCCCEEEEECCCCCCCCCCEEEECCCCCCCCEEECCEEEEEEECCCCCCCEEEEEEHH YFSKQFHDLENSKSVYWYDSVGTSTDNRLLLSYAGIKSDASGLDGEIPAYELVNANIGYK HHHHHHHCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEECCCCEE KDNWSVFVSGKNLQDRKYISSRLPEGIQPGPFRQVNFGVTLQL CCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCEEEEECEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2836368; 7610040; 9278503; 2254251; 2651410 [H]