Click here to switch to the map view.

The map label for this gene is 183221235

Identifier: 183221235

GI number: 183221235

Start: 1940336

End: 1940800

Strand: Direct

Name: 183221235

Synonym: LEPBI_I1850

Alternate gene names: NA

Gene position: 1940336-1940800 (Clockwise)

Preceding gene: 183221232

Following gene: 183221236

Centisome position: 53.9

GC content: 44.73

Gene sequence:

>465_bases
ATGGCAATGGCAATCATAGACCAACTGAACACACTTGGGATCCAAATCCCTCCGGTTCCTCCCGCGCTCGCGGCCTACAT
TCCTTCTAAACGAACCGGGAATCTGATTTTTACCTCTGGCCAACTCCCTCTCGTCGGAGGAAAACTTCGTAAAACAGGAA
AACTGGGAGCTCAAATCACGCTTGCGGAAGCAAAAGAAGAGGCAAAACAATGCCTACTCAATGCACTCTCCACTCTTCTC
TTACACATAGATTCTCTCGACCAAATCAAATCTGTTGTAAAATTAGGAGTTTACGTAGCAGGTGCAGAGACATTCACGGA
ACAACACTTAGTTGCCAATGGTGCCTCAGAACTAGTTGCTGAAATTTTTGGGGAAAAAGGAAAACATGCTAGGTTTGCCA
TTGGAGTTTCTTCTTTACCTTTGGATGCATGTGTTGAATTGGAGATGACTGTCGAAGTAGAATGA

Upstream 100 bases:

>100_bases
AGCACTCTTGATCTTTGACTGCCAATTGTCAAGAAAAAATCGGAATTTTTGCAATGGTGAAAAAAAATTTTGTCTCCTAG
GGGTGGAAACCATAGTTTGG

Downstream 100 bases:

>100_bases
CAAATACAATCATTTCCCTTTTTACTGAAACCATATCCTTTTTGATTGAATCAATCAAACTAATACCAGAACTCATCAAA
GTTTGGTGGTTTTTAGCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: Translation Initiation Inhibitor; Endoribonuclease L-PSP Family Protein; Endoribonuclease; Translation Initiation Inhibitor YjgF Family; Endoribonuclease L-Psp; Translation Initiation Inhibitor Protein; L-PSP Family Endoribonuclease; Endoribonuclease L-PSP Superfamily; Transcriptional Regulator; Endoribonuclease Family Protein; YjgF Family Translation Initiation Inhibitor; Endoribonuclease L-PSP Family; 2-Aminomuconate Deaminase; Peptidase C; Creatininase; Translation Initiation Inhibitor YjgF; Transcription Regulator; Endoribonuclease-L-PSP Family Protein

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MAMAIIDQLNTLGIQIPPVPPALAAYIPSKRTGNLIFTSGQLPLVGGKLRKTGKLGAQITLAEAKEEAKQCLLNALSTLL
LHIDSLDQIKSVVKLGVYVAGAETFTEQHLVANGASELVAEIFGEKGKHARFAIGVSSLPLDACVELEMTVEVE

Sequences:

>Translated_154_residues
MAMAIIDQLNTLGIQIPPVPPALAAYIPSKRTGNLIFTSGQLPLVGGKLRKTGKLGAQITLAEAKEEAKQCLLNALSTLL
LHIDSLDQIKSVVKLGVYVAGAETFTEQHLVANGASELVAEIFGEKGKHARFAIGVSSLPLDACVELEMTVEVE
>Mature_153_residues
AMAIIDQLNTLGIQIPPVPPALAAYIPSKRTGNLIFTSGQLPLVGGKLRKTGKLGAQITLAEAKEEAKQCLLNALSTLLL
HIDSLDQIKSVVKLGVYVAGAETFTEQHLVANGASELVAEIFGEKGKHARFAIGVSSLPLDACVELEMTVEVE

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16289; Mature: 16158

Theoretical pI: Translated: 5.67; Mature: 5.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAMAIIDQLNTLGIQIPPVPPALAAYIPSKRTGNLIFTSGQLPLVGGKLRKTGKLGAQIT
CCHHHHHHHHHCCEECCCCCHHHHHHCCCCCCCCEEEECCCCCEECCCCCCCCCCCCEEE
LAEAKEEAKQCLLNALSTLLLHIDSLDQIKSVVKLGVYVAGAETFTEQHLVANGASELVA
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEECCHHHHHHHHHHCCHHHHHH
EIFGEKGKHARFAIGVSSLPLDACVELEMTVEVE
HHHCCCCCCEEEEEECCCCCCCCEEEEEEEEEEC
>Mature Secondary Structure 
AMAIIDQLNTLGIQIPPVPPALAAYIPSKRTGNLIFTSGQLPLVGGKLRKTGKLGAQIT
CHHHHHHHHHCCEECCCCCHHHHHHCCCCCCCCEEEECCCCCEECCCCCCCCCCCCEEE
LAEAKEEAKQCLLNALSTLLLHIDSLDQIKSVVKLGVYVAGAETFTEQHLVANGASELVA
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHEECCHHHHHHHHHHCCHHHHHH
EIFGEKGKHARFAIGVSSLPLDACVELEMTVEVE
HHHCCCCCCEEEEEECCCCCCCCEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA