| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183221131
Identifier: 183221131
GI number: 183221131
Start: 1821234
End: 1822580
Strand: Reverse
Name: 183221131
Synonym: LEPBI_I1745
Alternate gene names: NA
Gene position: 1822580-1821234 (Counterclockwise)
Preceding gene: 183221132
Following gene: 183221129
Centisome position: 50.63
GC content: 36.82
Gene sequence:
>1347_bases ATGTCCATACAAATATCAATCTCTAGTCTGGTCATTTGTTTTATCAATCTTTGTACCTTAGCATTTTATTATTCCTTTTA TCGATTCCATTTTTACCGATTCACAGAGGGATTTTTACAGTACACAGCGCTTGCCTTTTCCTTGTTTAGTGCAGGGATTG CGATTGGACTACAGGCAGTTTTTTTGCAGCTCGTCCCGAATGGGGGACCGATTTGGAATTCGTTTTTCCTTTCATCTTTT GTGGAGGAATTTGCAAAACTGTTAGGCATCTATCTATTTTTTAGTAAAAACCAGGATGAGTTCACTGTGACGGATGGGAT CTTCTATGGGTTGGTCCTTGGAGGTGGGTTTGGACTTGTTGAAAATATTTTGTATTTCATCAATACAGGTTTATGGTCAC AAGTTTTACGATCGATCACCGCTCTGCCAATCCATATGATGAATGGTGGACTTGTCGGTGCATTTACGATGATGTTTCTT TTCCACAAAAATCCAATTTTTAAATGGGGGAATTTACTATCGGGATTCTTTATCTGTGTTTTTTTCCATGGTTTGTACAA TCTTTCCCTTTTCCAAGAAATTGACTTACTTGTGATTTTACCCATTTGTATCCTATCATTATTTTTTCTATTGGAAATCA CCATTGCAAAATCAAGGATCCTTGTCCCTGGTCATATTTTAAATTTAATGAATATGAGTATGGAAGAATATGAAATTTTG AGTCGGCACAATCGACATGAAGGTTGGATTCAAAATGTACAAAAACACATTTCAACAGCTGGGATTCGGTTATTCCAATA CCCAAATATAAGACACTCTGTCCTCACCATTTTTTTTCTAATTCCAGGCATACTTTCCATCTATCTATTGTTTGACGCAC CCGAGTGGATATCTCGGAAGTTTCCCGATCTTGCCTTACAAGATTATTTCGCTTTGTTTGTGATGTACCCGATTGTCCTT GCCCTCATGTTTTTTTTCGCGGGAATTTTAAATCCTTATTTTTTTAGGGATCGAATGCTTGCCGTTCCACTCTTTAGTTC TGTGGATATGCATGTAGAGGACAAAGAAGAAAATTCTGCCATCTTTCACATCAAAGCTAATTTATTTTACCTTCCTACTT CCCAAAATTATCCCAAGGAGACAAAAGCGAAATTTGATTTATGGCTAGGTTTGGATTGTTTTGCTGGTTTGGGTGGGAAA ATCCTTTGGAGTCGAGAAAATGAGGAAGGAAATTGTGGGGTAATGTGTGAACTCGATTCCATACCTTATTCGTTTCTGCT GAAATGGAATTATTTTCGATTCAAACAAAACGTAAAAAACTTATTTCTCAGAAAAGTACAAGTTTAG
Upstream 100 bases:
>100_bases CATTGATGGATTACGAAAAGCAGTCAAACGACTGGTTTAAGAAATGAATTCAGTAGATTTGATTCATTTTTGGACTCAGA TTTGTCGTTAATTTATAGGA
Downstream 100 bases:
>100_bases TTTTGATGAATCAAATCTAGATTAAAACTTTGTTTCAATACTAAAGCCGTATAACAAAAATTCGTTTGGTTTGTATATGG TCGTGTTAAACTGATGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 448; Mature: 447
Protein sequence:
>448_residues MSIQISISSLVICFINLCTLAFYYSFYRFHFYRFTEGFLQYTALAFSLFSAGIAIGLQAVFLQLVPNGGPIWNSFFLSSF VEEFAKLLGIYLFFSKNQDEFTVTDGIFYGLVLGGGFGLVENILYFINTGLWSQVLRSITALPIHMMNGGLVGAFTMMFL FHKNPIFKWGNLLSGFFICVFFHGLYNLSLFQEIDLLVILPICILSLFFLLEITIAKSRILVPGHILNLMNMSMEEYEIL SRHNRHEGWIQNVQKHISTAGIRLFQYPNIRHSVLTIFFLIPGILSIYLLFDAPEWISRKFPDLALQDYFALFVMYPIVL ALMFFFAGILNPYFFRDRMLAVPLFSSVDMHVEDKEENSAIFHIKANLFYLPTSQNYPKETKAKFDLWLGLDCFAGLGGK ILWSRENEEGNCGVMCELDSIPYSFLLKWNYFRFKQNVKNLFLRKVQV
Sequences:
>Translated_448_residues MSIQISISSLVICFINLCTLAFYYSFYRFHFYRFTEGFLQYTALAFSLFSAGIAIGLQAVFLQLVPNGGPIWNSFFLSSF VEEFAKLLGIYLFFSKNQDEFTVTDGIFYGLVLGGGFGLVENILYFINTGLWSQVLRSITALPIHMMNGGLVGAFTMMFL FHKNPIFKWGNLLSGFFICVFFHGLYNLSLFQEIDLLVILPICILSLFFLLEITIAKSRILVPGHILNLMNMSMEEYEIL SRHNRHEGWIQNVQKHISTAGIRLFQYPNIRHSVLTIFFLIPGILSIYLLFDAPEWISRKFPDLALQDYFALFVMYPIVL ALMFFFAGILNPYFFRDRMLAVPLFSSVDMHVEDKEENSAIFHIKANLFYLPTSQNYPKETKAKFDLWLGLDCFAGLGGK ILWSRENEEGNCGVMCELDSIPYSFLLKWNYFRFKQNVKNLFLRKVQV >Mature_447_residues SIQISISSLVICFINLCTLAFYYSFYRFHFYRFTEGFLQYTALAFSLFSAGIAIGLQAVFLQLVPNGGPIWNSFFLSSFV EEFAKLLGIYLFFSKNQDEFTVTDGIFYGLVLGGGFGLVENILYFINTGLWSQVLRSITALPIHMMNGGLVGAFTMMFLF HKNPIFKWGNLLSGFFICVFFHGLYNLSLFQEIDLLVILPICILSLFFLLEITIAKSRILVPGHILNLMNMSMEEYEILS RHNRHEGWIQNVQKHISTAGIRLFQYPNIRHSVLTIFFLIPGILSIYLLFDAPEWISRKFPDLALQDYFALFVMYPIVLA LMFFFAGILNPYFFRDRMLAVPLFSSVDMHVEDKEENSAIFHIKANLFYLPTSQNYPKETKAKFDLWLGLDCFAGLGGKI LWSRENEEGNCGVMCELDSIPYSFLLKWNYFRFKQNVKNLFLRKVQV
Specific function: Unknown
COG id: COG2339
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51793; Mature: 51661
Theoretical pI: Translated: 7.31; Mature: 7.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIQISISSLVICFINLCTLAFYYSFYRFHFYRFTEGFLQYTALAFSLFSAGIAIGLQAV CEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLQLVPNGGPIWNSFFLSSFVEEFAKLLGIYLFFSKNQDEFTVTDGIFYGLVLGGGFGLV HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEHHHHHHHHHCCCHHHH ENILYFINTGLWSQVLRSITALPIHMMNGGLVGAFTMMFLFHKNPIFKWGNLLSGFFICV HHHHHHHHCCHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH FFHGLYNLSLFQEIDLLVILPICILSLFFLLEITIAKSRILVPGHILNLMNMSMEEYEIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHCCHHHHHHH SRHNRHEGWIQNVQKHISTAGIRLFQYPNIRHSVLTIFFLIPGILSIYLLFDAPEWISRK HHCCCCHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC FPDLALQDYFALFVMYPIVLALMFFFAGILNPYFFRDRMLAVPLFSSVDMHVEDKEENSA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHEEEHHCCCCCEECCCCCCCE IFHIKANLFYLPTSQNYPKETKAKFDLWLGLDCFAGLGGKILWSRENEEGNCGVMCELDS EEEEEEEEEEECCCCCCCCHHCCCEEEEECHHHHHCCCCEEEEECCCCCCCCEEEEEECC IPYSFLLKWNYFRFKQNVKNLFLRKVQV CCHHHEEEHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SIQISISSLVICFINLCTLAFYYSFYRFHFYRFTEGFLQYTALAFSLFSAGIAIGLQAV EEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FLQLVPNGGPIWNSFFLSSFVEEFAKLLGIYLFFSKNQDEFTVTDGIFYGLVLGGGFGLV HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHEEECCCCCEEEEHHHHHHHHHCCCHHHH ENILYFINTGLWSQVLRSITALPIHMMNGGLVGAFTMMFLFHKNPIFKWGNLLSGFFICV HHHHHHHHCCHHHHHHHHHHHCHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH FFHGLYNLSLFQEIDLLVILPICILSLFFLLEITIAKSRILVPGHILNLMNMSMEEYEIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCHHHHHHHHCCHHHHHHH SRHNRHEGWIQNVQKHISTAGIRLFQYPNIRHSVLTIFFLIPGILSIYLLFDAPEWISRK HHCCCCHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCC FPDLALQDYFALFVMYPIVLALMFFFAGILNPYFFRDRMLAVPLFSSVDMHVEDKEENSA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHEEEHHCCCCCEECCCCCCCE IFHIKANLFYLPTSQNYPKETKAKFDLWLGLDCFAGLGGKILWSRENEEGNCGVMCELDS EEEEEEEEEEECCCCCCCCHHCCCEEEEECHHHHHCCCCEEEEECCCCCCCCEEEEEECC IPYSFLLKWNYFRFKQNVKNLFLRKVQV CCHHHEEEHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA