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The map label for this gene is qmcA [H]

Identifier: 183220989

GI number: 183220989

Start: 1677755

End: 1678675

Strand: Reverse

Name: qmcA [H]

Synonym: LEPBI_I1602

Alternate gene names: 183220989

Gene position: 1678675-1677755 (Counterclockwise)

Preceding gene: 183220990

Following gene: 183220985

Centisome position: 46.63

GC content: 43.0

Gene sequence:

>921_bases
ATGGAATTTGTTTATTTAGGTTTTTGGACCGCTGTTGCCATTTATGTAATTTATAAAATCTTTCGATGCATTCGCATCAT
ACCTGCCCAAGATGTTCTCATTGTCGAACGTTTGGGAAAGTATTCACGTTCCCTTCGAGCAGGATTTCATATCCTCATTC
CGTTTATCGATCGAGATGCGTATTACCACACTTTAAAAGAACAATCCATCGACGTACAACCGCAAATTTGTATCACCCAT
GATAACGTACAAGTGAAAGTGGATGGAGTGATTTACTTAAAGATCATCGATCCAGTTCGGGCCTCTTATGGTATCGAAGA
CTTTCAATTCGCAGCCATCCAACTAGCACAAACCACAATGCGATCGGTGATTGGAACCATGGAACTCGACAAAACGATTG
GTGAAAAAGATTTGATCAACTCAACGATTGTCGCCGCCATCGACCAAGCATCAGAACCATGGGGGATCAAAGTCAATCGT
TATGAAATTTTAAACATTGTACCACCCAAATCTGTGTTAGATGCTATGGAGAAGGAAAAAAAGGCTCAAATTGCAAAACG
TTCCCAAGTCCTTTTGTCGGAAGGCGAAAGAGATTCAAGGATCAACCGTTCTCTCGGTTTCAAAGAAGAAGCAGTGAACA
AATCCGAAGGGGAAAAACAACGGAGGATCAACTCTGCTGAAGGAAAGGCAACAGAGATTGAAGCTCTGGCCGTTGCGACT
GCCAAAGGGATTGAAGCCATCGCTGGTGCCATCTCTGACCAAGGCGGAGCGTCTGCGATCAAATTACAAATCACAAAGGC
CTTCATCCAAAACTTCCTCCATGTGGCTAAAGAGAGCACAGAAATTCTCATCCCAGCGGATGTTATGAATTTACCAACCC
TCATTGCCAACCTAACAGAGTCTAAAAAACCGAAGGCATAA

Upstream 100 bases:

>100_bases
TCCAAGACAACCGTTGTACCAGAAACGTTAGCCAATATTGGTGGGGTGTTTGAAGGACTTTCCAAAATCACAACCAAAAT
CCCACAGGTAGGAGAATAAT

Downstream 100 bases:

>100_bases
ATTTTCGCCTAACCAATCTAATCCGGTGGATCTCCCACCGGACTTTCTACAAACAATCGAAAACTTGGTTTGGCCATGGC
TTGGGCTGCGAGTGACAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MEFVYLGFWTAVAIYVIYKIFRCIRIIPAQDVLIVERLGKYSRSLRAGFHILIPFIDRDAYYHTLKEQSIDVQPQICITH
DNVQVKVDGVIYLKIIDPVRASYGIEDFQFAAIQLAQTTMRSVIGTMELDKTIGEKDLINSTIVAAIDQASEPWGIKVNR
YEILNIVPPKSVLDAMEKEKKAQIAKRSQVLLSEGERDSRINRSLGFKEEAVNKSEGEKQRRINSAEGKATEIEALAVAT
AKGIEAIAGAISDQGGASAIKLQITKAFIQNFLHVAKESTEILIPADVMNLPTLIANLTESKKPKA

Sequences:

>Translated_306_residues
MEFVYLGFWTAVAIYVIYKIFRCIRIIPAQDVLIVERLGKYSRSLRAGFHILIPFIDRDAYYHTLKEQSIDVQPQICITH
DNVQVKVDGVIYLKIIDPVRASYGIEDFQFAAIQLAQTTMRSVIGTMELDKTIGEKDLINSTIVAAIDQASEPWGIKVNR
YEILNIVPPKSVLDAMEKEKKAQIAKRSQVLLSEGERDSRINRSLGFKEEAVNKSEGEKQRRINSAEGKATEIEALAVAT
AKGIEAIAGAISDQGGASAIKLQITKAFIQNFLHVAKESTEILIPADVMNLPTLIANLTESKKPKA
>Mature_306_residues
MEFVYLGFWTAVAIYVIYKIFRCIRIIPAQDVLIVERLGKYSRSLRAGFHILIPFIDRDAYYHTLKEQSIDVQPQICITH
DNVQVKVDGVIYLKIIDPVRASYGIEDFQFAAIQLAQTTMRSVIGTMELDKTIGEKDLINSTIVAAIDQASEPWGIKVNR
YEILNIVPPKSVLDAMEKEKKAQIAKRSQVLLSEGERDSRINRSLGFKEEAVNKSEGEKQRRINSAEGKATEIEALAVAT
AKGIEAIAGAISDQGGASAIKLQITKAFIQNFLHVAKESTEILIPADVMNLPTLIANLTESKKPKA

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI7305503, Length=270, Percent_Identity=42.2222222222222, Blast_Score=215, Evalue=4e-56,
Organism=Homo sapiens, GI21686995, Length=196, Percent_Identity=32.1428571428571, Blast_Score=93, Evalue=3e-19,
Organism=Homo sapiens, GI221316744, Length=182, Percent_Identity=32.967032967033, Blast_Score=93, Evalue=3e-19,
Organism=Homo sapiens, GI38016911, Length=252, Percent_Identity=28.1746031746032, Blast_Score=88, Evalue=1e-17,
Organism=Escherichia coli, GI1786697, Length=285, Percent_Identity=32.9824561403509, Blast_Score=175, Evalue=3e-45,
Organism=Caenorhabditis elegans, GI32564147, Length=276, Percent_Identity=40.5797101449275, Blast_Score=219, Evalue=1e-57,
Organism=Caenorhabditis elegans, GI17569493, Length=222, Percent_Identity=30.6306306306306, Blast_Score=107, Evalue=9e-24,
Organism=Caenorhabditis elegans, GI193209764, Length=222, Percent_Identity=30.6306306306306, Blast_Score=106, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI71989948, Length=184, Percent_Identity=31.5217391304348, Blast_Score=101, Evalue=4e-22,
Organism=Caenorhabditis elegans, GI71989955, Length=184, Percent_Identity=31.5217391304348, Blast_Score=101, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI17569497, Length=205, Percent_Identity=30.2439024390244, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17569499, Length=204, Percent_Identity=31.3725490196078, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI71987612, Length=203, Percent_Identity=30.0492610837438, Blast_Score=89, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI71987621, Length=203, Percent_Identity=30.0492610837438, Blast_Score=88, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI25153583, Length=203, Percent_Identity=30.0492610837438, Blast_Score=88, Evalue=6e-18,
Organism=Caenorhabditis elegans, GI17570161, Length=206, Percent_Identity=28.6407766990291, Blast_Score=84, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI193210507, Length=206, Percent_Identity=28.6407766990291, Blast_Score=84, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI32566490, Length=192, Percent_Identity=29.1666666666667, Blast_Score=82, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17570459, Length=208, Percent_Identity=26.9230769230769, Blast_Score=76, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI71989963, Length=126, Percent_Identity=32.5396825396825, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI45550506, Length=274, Percent_Identity=41.970802919708, Blast_Score=214, Evalue=7e-56,
Organism=Drosophila melanogaster, GI45556022, Length=207, Percent_Identity=32.8502415458937, Blast_Score=105, Evalue=5e-23,
Organism=Drosophila melanogaster, GI18860517, Length=205, Percent_Identity=34.1463414634146, Blast_Score=104, Evalue=9e-23,
Organism=Drosophila melanogaster, GI28573263, Length=190, Percent_Identity=30.5263157894737, Blast_Score=96, Evalue=2e-20,
Organism=Drosophila melanogaster, GI281361631, Length=198, Percent_Identity=26.7676767676768, Blast_Score=94, Evalue=8e-20,
Organism=Drosophila melanogaster, GI281361633, Length=198, Percent_Identity=26.7676767676768, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI21356845, Length=190, Percent_Identity=26.8421052631579, Blast_Score=93, Evalue=2e-19,
Organism=Drosophila melanogaster, GI24657857, Length=222, Percent_Identity=29.2792792792793, Blast_Score=92, Evalue=4e-19,
Organism=Drosophila melanogaster, GI62484448, Length=222, Percent_Identity=29.2792792792793, Blast_Score=92, Evalue=5e-19,
Organism=Drosophila melanogaster, GI62484274, Length=222, Percent_Identity=29.2792792792793, Blast_Score=92, Evalue=6e-19,
Organism=Drosophila melanogaster, GI281365664, Length=213, Percent_Identity=29.5774647887324, Blast_Score=92, Evalue=6e-19,
Organism=Drosophila melanogaster, GI281361635, Length=126, Percent_Identity=26.984126984127, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 34046; Mature: 34046

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFVYLGFWTAVAIYVIYKIFRCIRIIPAQDVLIVERLGKYSRSLRAGFHILIPFIDRDA
CCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEEEEEEECCCH
YYHTLKEQSIDVQPQICITHDNVQVKVDGVIYLKIIDPVRASYGIEDFQFAAIQLAQTTM
HHHHHHHCCCCCCCEEEEEECCEEEEECCEEEEEEECHHHHHCCCCHHHHHHHHHHHHHH
RSVIGTMELDKTIGEKDLINSTIVAAIDQASEPWGIKVNRYEILNIVPPKSVLDAMEKEK
HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCHHHHHHHHHHH
KAQIAKRSQVLLSEGERDSRINRSLGFKEEAVNKSEGEKQRRINSAEGKATEIEALAVAT
HHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHCCCCCCHHHHHCCCCCCCCHHHHHHHHHH
AKGIEAIAGAISDQGGASAIKLQITKAFIQNFLHVAKESTEILIPADVMNLPTLIANLTE
HHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHC
SKKPKA
CCCCCC
>Mature Secondary Structure
MEFVYLGFWTAVAIYVIYKIFRCIRIIPAQDVLIVERLGKYSRSLRAGFHILIPFIDRDA
CCEEEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEEEEEEECCCH
YYHTLKEQSIDVQPQICITHDNVQVKVDGVIYLKIIDPVRASYGIEDFQFAAIQLAQTTM
HHHHHHHCCCCCCCEEEEEECCEEEEECCEEEEEEECHHHHHCCCCHHHHHHHHHHHHHH
RSVIGTMELDKTIGEKDLINSTIVAAIDQASEPWGIKVNRYEILNIVPPKSVLDAMEKEK
HHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCEEEEEEEEEEECCCHHHHHHHHHHH
KAQIAKRSQVLLSEGERDSRINRSLGFKEEAVNKSEGEKQRRINSAEGKATEIEALAVAT
HHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHCCCCCCHHHHHCCCCCCCCHHHHHHHHHH
AKGIEAIAGAISDQGGASAIKLQITKAFIQNFLHVAKESTEILIPADVMNLPTLIANLTE
HHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHC
SKKPKA
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]