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The map label for this gene is ybbK [C]

Identifier: 183220990

GI number: 183220990

Start: 1678677

End: 1679597

Strand: Reverse

Name: ybbK [C]

Synonym: LEPBI_I1603

Alternate gene names: 183220990

Gene position: 1679597-1678677 (Counterclockwise)

Preceding gene: 183220991

Following gene: 183220989

Centisome position: 46.66

GC content: 41.26

Gene sequence:

>921_bases
ATGAACGAAATCGTCATAATTGTATTTTTGGCAATTGTTTATATCATCAAAAAGACAATCATCATCGTACCAGAACAAAG
TGTTTTTATCAAAGAAAGATTAGGGGTTTTGAATGGAGTTTTAAAATCGGGATTTTATTTTATGATCCCTTTTGTCGACC
AAATCCGTTACAGACAAAACCTGAAAGAACAAACCATCGACATCGACCCACAAGTCTGTATCACAAAAGACAACGTTTCT
GTGGAAGTGGATGGAGTTTTATATCTCAAAGTCATCGATGGCGAAAAGGCTTCTTATGGGATTGATAACTTTATGTTGGC
GACCACACAACTTGCCCAAACCACACTTCGATCAGAGATTGGTAAACTCATCTTTGATAACCTACTTTCAGAACGTGATG
AGATCAATGGTCGTGTGGTTTCCAATATTGATCGTGCGACAGACCCTTGGGGGATCAAAGTCACTAGGTACGAAATTCGT
AACATCACCCCTCCCAAACAAATCTTAATCGAAATGGAAAACCAAATGAAATCGGAACGAGAACGCCGTGCCGAGATCAC
GATCTCCCAAGGAGAAAAGGAATCCCGAGTGAATCACTCCGTTGGGGAAAGACAAGAATCCATCAATATCTCCGAAGGGG
AAAAAATCAGATTGGTGAATGAGGCAGACGGCCGTGCCCAAGAAATCACACTCATCTCCAATGCTACAGCGAAAGGTTTA
CAACTGATTTCAGAAGCCATCAGCAAAAAAGGCGGAAAGGAAGCGGTGAGTTTACAAATCACACAAGAATACTTGGATGC
CCTCGGCCAAATCTTAAAAACATCCAAGACAACCGTTGTACCAGAAACGTTAGCCAATATTGGTGGGGTGTTTGAAGGAC
TTTCCAAAATCACAACCAAAATCCCACAGGTAGGAGAATAA

Upstream 100 bases:

>100_bases
TTCATAAATGGGAGCTTTCATTTTTTTTAAGATCCAATAAAAAAACCCTTTTCTCTTTTGAAAGTCCATGTACTTTCAAT
CGTCACAGAGGAGGAAACTT

Downstream 100 bases:

>100_bases
TATGGAATTTGTTTATTTAGGTTTTTGGACCGCTGTTGCCATTTATGTAATTTATAAAATCTTTCGATGCATTCGCATCA
TACCTGCCCAAGATGTTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 306; Mature: 306

Protein sequence:

>306_residues
MNEIVIIVFLAIVYIIKKTIIIVPEQSVFIKERLGVLNGVLKSGFYFMIPFVDQIRYRQNLKEQTIDIDPQVCITKDNVS
VEVDGVLYLKVIDGEKASYGIDNFMLATTQLAQTTLRSEIGKLIFDNLLSERDEINGRVVSNIDRATDPWGIKVTRYEIR
NITPPKQILIEMENQMKSERERRAEITISQGEKESRVNHSVGERQESINISEGEKIRLVNEADGRAQEITLISNATAKGL
QLISEAISKKGGKEAVSLQITQEYLDALGQILKTSKTTVVPETLANIGGVFEGLSKITTKIPQVGE

Sequences:

>Translated_306_residues
MNEIVIIVFLAIVYIIKKTIIIVPEQSVFIKERLGVLNGVLKSGFYFMIPFVDQIRYRQNLKEQTIDIDPQVCITKDNVS
VEVDGVLYLKVIDGEKASYGIDNFMLATTQLAQTTLRSEIGKLIFDNLLSERDEINGRVVSNIDRATDPWGIKVTRYEIR
NITPPKQILIEMENQMKSERERRAEITISQGEKESRVNHSVGERQESINISEGEKIRLVNEADGRAQEITLISNATAKGL
QLISEAISKKGGKEAVSLQITQEYLDALGQILKTSKTTVVPETLANIGGVFEGLSKITTKIPQVGE
>Mature_306_residues
MNEIVIIVFLAIVYIIKKTIIIVPEQSVFIKERLGVLNGVLKSGFYFMIPFVDQIRYRQNLKEQTIDIDPQVCITKDNVS
VEVDGVLYLKVIDGEKASYGIDNFMLATTQLAQTTLRSEIGKLIFDNLLSERDEINGRVVSNIDRATDPWGIKVTRYEIR
NITPPKQILIEMENQMKSERERRAEITISQGEKESRVNHSVGERQESINISEGEKIRLVNEADGRAQEITLISNATAKGL
QLISEAISKKGGKEAVSLQITQEYLDALGQILKTSKTTVVPETLANIGGVFEGLSKITTKIPQVGE

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI7305503, Length=284, Percent_Identity=37.6760563380282, Blast_Score=213, Evalue=2e-55,
Organism=Homo sapiens, GI38016911, Length=199, Percent_Identity=37.1859296482412, Blast_Score=99, Evalue=5e-21,
Organism=Homo sapiens, GI221316744, Length=211, Percent_Identity=30.8056872037915, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI21686995, Length=212, Percent_Identity=30.6603773584906, Blast_Score=87, Evalue=3e-17,
Organism=Escherichia coli, GI1786697, Length=296, Percent_Identity=36.1486486486487, Blast_Score=196, Evalue=2e-51,
Organism=Caenorhabditis elegans, GI32564147, Length=294, Percent_Identity=38.4353741496599, Blast_Score=217, Evalue=5e-57,
Organism=Caenorhabditis elegans, GI17569493, Length=188, Percent_Identity=33.5106382978723, Blast_Score=105, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI193209764, Length=188, Percent_Identity=33.5106382978723, Blast_Score=105, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI17569499, Length=171, Percent_Identity=32.1637426900585, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI71989948, Length=165, Percent_Identity=35.1515151515151, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI71989955, Length=165, Percent_Identity=35.1515151515151, Blast_Score=96, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI71987612, Length=201, Percent_Identity=30.3482587064677, Blast_Score=96, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI25153583, Length=201, Percent_Identity=30.3482587064677, Blast_Score=96, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI71987621, Length=201, Percent_Identity=30.3482587064677, Blast_Score=95, Evalue=6e-20,
Organism=Caenorhabditis elegans, GI193210507, Length=195, Percent_Identity=30.2564102564103, Blast_Score=87, Evalue=9e-18,
Organism=Caenorhabditis elegans, GI17570161, Length=195, Percent_Identity=30.2564102564103, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI32566490, Length=167, Percent_Identity=31.1377245508982, Blast_Score=86, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17569497, Length=188, Percent_Identity=28.7234042553192, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17570459, Length=181, Percent_Identity=29.8342541436464, Blast_Score=81, Evalue=9e-16,
Organism=Drosophila melanogaster, GI45550506, Length=274, Percent_Identity=38.6861313868613, Blast_Score=213, Evalue=2e-55,
Organism=Drosophila melanogaster, GI45556022, Length=199, Percent_Identity=33.1658291457286, Blast_Score=105, Evalue=4e-23,
Organism=Drosophila melanogaster, GI281365664, Length=166, Percent_Identity=35.5421686746988, Blast_Score=101, Evalue=7e-22,
Organism=Drosophila melanogaster, GI24657857, Length=166, Percent_Identity=35.5421686746988, Blast_Score=101, Evalue=7e-22,
Organism=Drosophila melanogaster, GI62484448, Length=172, Percent_Identity=34.8837209302326, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI62484274, Length=172, Percent_Identity=34.8837209302326, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI18860517, Length=200, Percent_Identity=32.5, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI281361631, Length=193, Percent_Identity=29.0155440414508, Blast_Score=88, Evalue=6e-18,
Organism=Drosophila melanogaster, GI281361633, Length=193, Percent_Identity=29.0155440414508, Blast_Score=88, Evalue=8e-18,
Organism=Drosophila melanogaster, GI21356845, Length=190, Percent_Identity=25.2631578947368, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI28573263, Length=216, Percent_Identity=26.3888888888889, Blast_Score=82, Evalue=4e-16,
Organism=Drosophila melanogaster, GI281361635, Length=132, Percent_Identity=26.5151515151515, Blast_Score=65, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 34237; Mature: 34237

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEIVIIVFLAIVYIIKKTIIIVPEQSVFIKERLGVLNGVLKSGFYFMIPFVDQIRYRQN
CCCEEHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHC
LKEQTIDIDPQVCITKDNVSVEVDGVLYLKVIDGEKASYGIDNFMLATTQLAQTTLRSEI
HHHHCCCCCCCEEEEECCCEEEECCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH
GKLIFDNLLSERDEINGRVVSNIDRATDPWGIKVTRYEIRNITPPKQILIEMENQMKSER
HHHHHHHHHHHHHHCCCCEECCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHH
ERRAEITISQGEKESRVNHSVGERQESINISEGEKIRLVNEADGRAQEITLISNATAKGL
HHHHEEEECCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEEEECCCHHHH
QLISEAISKKGGKEAVSLQITQEYLDALGQILKTSKTTVVPETLANIGGVFEGLSKITTK
HHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHH
IPQVGE
CCCCCC
>Mature Secondary Structure
MNEIVIIVFLAIVYIIKKTIIIVPEQSVFIKERLGVLNGVLKSGFYFMIPFVDQIRYRQN
CCCEEHHHHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHC
LKEQTIDIDPQVCITKDNVSVEVDGVLYLKVIDGEKASYGIDNFMLATTQLAQTTLRSEI
HHHHCCCCCCCEEEEECCCEEEECCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH
GKLIFDNLLSERDEINGRVVSNIDRATDPWGIKVTRYEIRNITPPKQILIEMENQMKSER
HHHHHHHHHHHHHHCCCCEECCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHH
ERRAEITISQGEKESRVNHSVGERQESINISEGEKIRLVNEADGRAQEITLISNATAKGL
HHHHEEEECCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEEEECCCHHHH
QLISEAISKKGGKEAVSLQITQEYLDALGQILKTSKTTVVPETLANIGGVFEGLSKITTK
HHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHCCCCEECHHHHHHHHHHHHHHHHHHHH
IPQVGE
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]