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The map label for this gene is rsmE [H]

Identifier: 183220982

GI number: 183220982

Start: 1672540

End: 1673256

Strand: Reverse

Name: rsmE [H]

Synonym: LEPBI_I1595

Alternate gene names: 183220982

Gene position: 1673256-1672540 (Counterclockwise)

Preceding gene: 183220983

Following gene: 183220980

Centisome position: 46.48

GC content: 37.66

Gene sequence:

>717_bases
TTGAATTGGATCATTGTTCGTGAAGAGGAATTGAACACAGAGAAGATTGTATCCCTACGAGACAAACGCCACCAACATAT
TAAATCCATTTTAAAAAAGAATCCTGGTGATTCTCTGCAAGTGGTGATTCCTAATTTAGGAAATTTTTTTTTCCGCATCA
TCGAAATCCATGAATCCTATTCCACGCTGGAGAGAGAAAAATCATTACAAACAGAATTAGAACCCCTTCCTATCCATTGT
TTTTTTTCCCTTCCTAGACCTCAAACGGCCAAAAAAATCCTACACCTAGCAGGTGCCTACGGGATCCAGAGTTTATCCTT
TTTTGCCACGGAAACAAAAAATAAGGAATATTGGACTTCGCCTGTTTATACAAAGGAATGGATTGATTGGATAGAGACTG
GTATGAGCCAAACAGGGAACAACCGAACTCCAAAAATTATTTTTGGACAAAATCAAAATTGGAAACCGTATTTAGAATCG
TGGCAAGGAGAGGTAATTGTTTTGGATCGTATGGGTGATCTGGATTCGAAAACGATGGCTCAATCGATTGGTAGCGAAAA
ACAATCCCTATTTGTCTTTGGACCTGAATCCGGTTGGAAACCAGATGATTTGGATTTTTTTTCAAAGAGAAAATATTTAC
TCCATACACTTGGCAGGATCAACCTGCGAACTGAATTTGCTTTCTCTTCGCTTTTATATCTACTTTTTAAAAACTAA

Upstream 100 bases:

>100_bases
GGAAATCCCACCACCAATCTTTCAAGAACCCGAGATCCAATCACCTAACGAAGATACACCCAATCCAACGATTCCAAAAC
CAAACTTTGAGATTTAAAAC

Downstream 100 bases:

>100_bases
TTCCACCAGAAACAAGGAATCGAATTTCATCGATACTGAGGAAAGACTTTTCACTGGAATCTAAGTAATACTTTCGATAA
TTCTGAACTCTTAATACGAT

Product: hypothetical protein

Products: NA

Alternate protein names: 16S rRNA m3U1498 methyltransferase [H]

Number of amino acids: Translated: 238; Mature: 238

Protein sequence:

>238_residues
MNWIIVREEELNTEKIVSLRDKRHQHIKSILKKNPGDSLQVVIPNLGNFFFRIIEIHESYSTLEREKSLQTELEPLPIHC
FFSLPRPQTAKKILHLAGAYGIQSLSFFATETKNKEYWTSPVYTKEWIDWIETGMSQTGNNRTPKIIFGQNQNWKPYLES
WQGEVIVLDRMGDLDSKTMAQSIGSEKQSLFVFGPESGWKPDDLDFFSKRKYLLHTLGRINLRTEFAFSSLLYLLFKN

Sequences:

>Translated_238_residues
MNWIIVREEELNTEKIVSLRDKRHQHIKSILKKNPGDSLQVVIPNLGNFFFRIIEIHESYSTLEREKSLQTELEPLPIHC
FFSLPRPQTAKKILHLAGAYGIQSLSFFATETKNKEYWTSPVYTKEWIDWIETGMSQTGNNRTPKIIFGQNQNWKPYLES
WQGEVIVLDRMGDLDSKTMAQSIGSEKQSLFVFGPESGWKPDDLDFFSKRKYLLHTLGRINLRTEFAFSSLLYLLFKN
>Mature_238_residues
MNWIIVREEELNTEKIVSLRDKRHQHIKSILKKNPGDSLQVVIPNLGNFFFRIIEIHESYSTLEREKSLQTELEPLPIHC
FFSLPRPQTAKKILHLAGAYGIQSLSFFATETKNKEYWTSPVYTKEWIDWIETGMSQTGNNRTPKIIFGQNQNWKPYLES
WQGEVIVLDRMGDLDSKTMAQSIGSEKQSLFVFGPESGWKPDDLDFFSKRKYLLHTLGRINLRTEFAFSSLLYLLFKN

Specific function: Specifically methylates the uridine in position 1498 of 16S rRNA in the fully assembled 30S ribosomal subunit [H]

COG id: COG1385

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RNA methyltransferase RsmE family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006700 [H]

Pfam domain/function: PF04452 Methyltrans_RNA [H]

EC number: =2.1.1.193 [H]

Molecular weight: Translated: 27822; Mature: 27822

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWIIVREEELNTEKIVSLRDKRHQHIKSILKKNPGDSLQVVIPNLGNFFFRIIEIHESY
CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHH
STLEREKSLQTELEPLPIHCFFSLPRPQTAKKILHLAGAYGIQSLSFFATETKNKEYWTS
HHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCEECC
PVYTKEWIDWIETGMSQTGNNRTPKIIFGQNQNWKPYLESWQGEVIVLDRMGDLDSKTMA
CCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHCCCCCEEEEECCCCCCHHHHH
QSIGSEKQSLFVFGPESGWKPDDLDFFSKRKYLLHTLGRINLRTEFAFSSLLYLLFKN
HHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNWIIVREEELNTEKIVSLRDKRHQHIKSILKKNPGDSLQVVIPNLGNFFFRIIEIHESY
CCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHHH
STLEREKSLQTELEPLPIHCFFSLPRPQTAKKILHLAGAYGIQSLSFFATETKNKEYWTS
HHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCEECC
PVYTKEWIDWIETGMSQTGNNRTPKIIFGQNQNWKPYLESWQGEVIVLDRMGDLDSKTMA
CCCHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCHHHHCCCCCEEEEECCCCCCHHHHH
QSIGSEKQSLFVFGPESGWKPDDLDFFSKRKYLLHTLGRINLRTEFAFSSLLYLLFKN
HHHCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9665876 [H]