| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is ilvA [H]
Identifier: 183220977
GI number: 183220977
Start: 1666115
End: 1667392
Strand: Direct
Name: ilvA [H]
Synonym: LEPBI_I1590
Alternate gene names: 183220977
Gene position: 1666115-1667392 (Clockwise)
Preceding gene: 183220976
Following gene: 183220981
Centisome position: 46.29
GC content: 38.97
Gene sequence:
>1278_bases ATGAGTTCCTTGGGAAACTTGAGACAAACTGGAACGTACCTCCCCATGAAATTAGATATCGATTCTGCTTATAAAATCTT AGAACCTATTGTGAAAAAAACTCCCTTAGAGTATCATTCTAGGTTATCCGACCTTTATGGTGCCAAGGTATTCATCAAAC GTGAAGACCTCCAAGTGGTTCGATCTTACAAAATCCGCGGTGCGTATCATATGATCCAAAGTTTACCCATGGAAACAAGA TCACATGGTGTTGTTTGTGCGAGTGCCGGAAACCATGCGCAAGGCGTCGCTTATTCCTGTAATCTTTTGAAACTATATGG TAAAATTTATATGCCAGAAGTGACACCAAAACAAAAAATCAACCAGGTACGTATGTTTGGTGGTGAATTCATCGAAATTA GATTAGTCGGTGATACATTTGATGAATGCCAAAAAGAAGCAATAGACTATGCGAATACAAACAAAATGTCATTTATCCCT CCCTTTGATCATAATAAGATTATGGAGGGTCAGGGGACGGTTGCAAAGGAAATTCTTTTCGAATTGGATCGTATCGACTA CCTATTTTTGCCGATTGGAGGTGGTGGACTTTGTGCCGGAGTGGGAACCTATTTTAAAATTCATTCCCCACAAACAAAAA TCATTGGAGCTGAGCCGATGGGGGCTCCTTCCATGAAAGAAGCTTTCCACTCAGGCAAGCCAATTGTCTTGGAGAAAATT GATAAATTTGTCGATGGAGCTGCTGTAAAAAAAGTGGGTGAGTTTACGTTTCCAATTTGCCAATCAGTTTTGCATGACCT TTGCCTCGTGCCAGAAGGAAAGGTTTGTACCACCATATTAAATTTATATAATCTTGATGCGATCGTAAGTGAGCCAGCGG GAGCATTGAGTATCGCTGCCTTAGACGATTATAAAGAATCCATACGTGGCAAAACGGTTGTTTGTATTCTCAGTGGAGGG AATAACGATATTGATCGTATGCAAGAGATCAAGGAGAGATCGTTACTCTATGAAGGTCTTAAACAATACTTCATTGTTCG GTTTGCTCAGAAGCCAGGAGCCCTCAAACAATTTGTAAATGAAATATTAGGACCCAATGATGACATCGTGAGATTCGAAT TCATTCAAAAAAATAATAAAGAATCTGGGCCAGCGCTCATTGGAATTGAACTCAAATCAAAAGATGATTTCCAAAATTTA CTCATCCGTATGCAAGAATATCGATTGAATTTTACGTTGATCAACCAAGATGAAAATTTATTTGAATATCTCATTTGA
Upstream 100 bases:
>100_bases AAAATAGAAACCTGGTTTTAACTGAGAACATTTGAATTTTTAATTGTATGCTGATCGTAATTATCGGTTCTCTAGTGAAT ATATTTTTCATTGGTAAAGA
Downstream 100 bases:
>100_bases GACTTAAGTTAAATTAAAAACTTGTTTTTGTTTTTCCTATCTTTTCGTTGAAATTCTTTGATTTGTCTAAAGGAAAATGA ATTTTGATCGATATTGGTAT
Product: threonine dehydratase biosynthetic
Products: NA
Alternate protein names: Threonine deaminase [H]
Number of amino acids: Translated: 425; Mature: 424
Protein sequence:
>425_residues MSSLGNLRQTGTYLPMKLDIDSAYKILEPIVKKTPLEYHSRLSDLYGAKVFIKREDLQVVRSYKIRGAYHMIQSLPMETR SHGVVCASAGNHAQGVAYSCNLLKLYGKIYMPEVTPKQKINQVRMFGGEFIEIRLVGDTFDECQKEAIDYANTNKMSFIP PFDHNKIMEGQGTVAKEILFELDRIDYLFLPIGGGGLCAGVGTYFKIHSPQTKIIGAEPMGAPSMKEAFHSGKPIVLEKI DKFVDGAAVKKVGEFTFPICQSVLHDLCLVPEGKVCTTILNLYNLDAIVSEPAGALSIAALDDYKESIRGKTVVCILSGG NNDIDRMQEIKERSLLYEGLKQYFIVRFAQKPGALKQFVNEILGPNDDIVRFEFIQKNNKESGPALIGIELKSKDDFQNL LIRMQEYRLNFTLINQDENLFEYLI
Sequences:
>Translated_425_residues MSSLGNLRQTGTYLPMKLDIDSAYKILEPIVKKTPLEYHSRLSDLYGAKVFIKREDLQVVRSYKIRGAYHMIQSLPMETR SHGVVCASAGNHAQGVAYSCNLLKLYGKIYMPEVTPKQKINQVRMFGGEFIEIRLVGDTFDECQKEAIDYANTNKMSFIP PFDHNKIMEGQGTVAKEILFELDRIDYLFLPIGGGGLCAGVGTYFKIHSPQTKIIGAEPMGAPSMKEAFHSGKPIVLEKI DKFVDGAAVKKVGEFTFPICQSVLHDLCLVPEGKVCTTILNLYNLDAIVSEPAGALSIAALDDYKESIRGKTVVCILSGG NNDIDRMQEIKERSLLYEGLKQYFIVRFAQKPGALKQFVNEILGPNDDIVRFEFIQKNNKESGPALIGIELKSKDDFQNL LIRMQEYRLNFTLINQDENLFEYLI >Mature_424_residues SSLGNLRQTGTYLPMKLDIDSAYKILEPIVKKTPLEYHSRLSDLYGAKVFIKREDLQVVRSYKIRGAYHMIQSLPMETRS HGVVCASAGNHAQGVAYSCNLLKLYGKIYMPEVTPKQKINQVRMFGGEFIEIRLVGDTFDECQKEAIDYANTNKMSFIPP FDHNKIMEGQGTVAKEILFELDRIDYLFLPIGGGGLCAGVGTYFKIHSPQTKIIGAEPMGAPSMKEAFHSGKPIVLEKID KFVDGAAVKKVGEFTFPICQSVLHDLCLVPEGKVCTTILNLYNLDAIVSEPAGALSIAALDDYKESIRGKTVVCILSGGN NDIDRMQEIKERSLLYEGLKQYFIVRFAQKPGALKQFVNEILGPNDDIVRFEFIQKNNKESGPALIGIELKSKDDFQNLL IRMQEYRLNFTLINQDENLFEYLI
Specific function: Catalyzes the formation of alpha-ketobutyrate from threonine in a two-step reaction. The first step is a dehydration of threonine, followed by rehydration and liberation of ammonia [H]
COG id: COG1171
COG function: function code E; Threonine dehydratase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the serine/threonine dehydratase family [H]
Homologues:
Organism=Homo sapiens, GI11345492, Length=313, Percent_Identity=27.4760383386581, Blast_Score=122, Evalue=8e-28, Organism=Homo sapiens, GI19923959, Length=318, Percent_Identity=27.6729559748428, Blast_Score=80, Evalue=3e-15, Organism=Homo sapiens, GI33469958, Length=326, Percent_Identity=27.9141104294479, Blast_Score=77, Evalue=2e-14, Organism=Escherichia coli, GI1790207, Length=348, Percent_Identity=37.0689655172414, Blast_Score=217, Evalue=1e-57, Organism=Escherichia coli, GI1789505, Length=326, Percent_Identity=34.9693251533742, Blast_Score=158, Evalue=5e-40, Organism=Caenorhabditis elegans, GI71991565, Length=352, Percent_Identity=32.1022727272727, Blast_Score=149, Evalue=2e-36, Organism=Caenorhabditis elegans, GI17537387, Length=392, Percent_Identity=29.8469387755102, Blast_Score=135, Evalue=3e-32, Organism=Caenorhabditis elegans, GI17508781, Length=320, Percent_Identity=25.625, Blast_Score=91, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6320930, Length=345, Percent_Identity=36.8115942028986, Blast_Score=210, Evalue=3e-55, Organism=Saccharomyces cerevisiae, GI6322631, Length=313, Percent_Identity=34.185303514377, Blast_Score=166, Evalue=5e-42, Organism=Saccharomyces cerevisiae, GI6319788, Length=234, Percent_Identity=25.2136752136752, Blast_Score=69, Evalue=1e-12, Organism=Drosophila melanogaster, GI21355833, Length=341, Percent_Identity=32.8445747800587, Blast_Score=137, Evalue=1e-32, Organism=Drosophila melanogaster, GI24645328, Length=249, Percent_Identity=31.3253012048193, Blast_Score=85, Evalue=1e-16,
Paralogues:
None
Copy number: 1344 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001926 - InterPro: IPR000634 - InterPro: IPR001721 - InterPro: IPR011820 [H]
Pfam domain/function: PF00291 PALP; PF00585 Thr_dehydrat_C [H]
EC number: =4.3.1.19 [H]
Molecular weight: Translated: 47720; Mature: 47589
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: PS00165 DEHYDRATASE_SER_THR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLGNLRQTGTYLPMKLDIDSAYKILEPIVKKTPLEYHSRLSDLYGAKVFIKREDLQVV CCCCCCHHHCCCCCEEEECHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEHHHHHHH RSYKIRGAYHMIQSLPMETRSHGVVCASAGNHAQGVAYSCNLLKLYGKIYMPEVTPKQKI HHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCEEEHHHHHHHHHHCCCCCCHHHHH NQVRMFGGEFIEIRLVGDTFDECQKEAIDYANTNKMSFIPPFDHNKIMEGQGTVAKEILF HHHHHCCCCEEEEEEECCCHHHHHHHHHCCCCCCCEEECCCCCCCCEECCCCHHHHHHHH ELDRIDYLFLPIGGGGLCAGVGTYFKIHSPQTKIIGAEPMGAPSMKEAFHSGKPIVLEKI HHHCCCEEEEEECCCCHHHCCCCEEEEECCCCEEEECCCCCCCHHHHHHHCCCCHHHHHH DKFVDGAAVKKVGEFTFPICQSVLHDLCLVPEGKVCTTILNLYNLDAIVSEPAGALSIAA HHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEE LDDYKESIRGKTVVCILSGGNNDIDRMQEIKERSLLYEGLKQYFIVRFAQKPGALKQFVN HHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH EILGPNDDIVRFEFIQKNNKESGPALIGIELKSKDDFQNLLIRMQEYRLNFTLINQDENL HHCCCCCCEEEEEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHHHEEEEEEECCCCHH FEYLI HHHCC >Mature Secondary Structure SSLGNLRQTGTYLPMKLDIDSAYKILEPIVKKTPLEYHSRLSDLYGAKVFIKREDLQVV CCCCCHHHCCCCCEEEECHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEHHHHHHH RSYKIRGAYHMIQSLPMETRSHGVVCASAGNHAQGVAYSCNLLKLYGKIYMPEVTPKQKI HHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCEEEHHHHHHHHHHCCCCCCHHHHH NQVRMFGGEFIEIRLVGDTFDECQKEAIDYANTNKMSFIPPFDHNKIMEGQGTVAKEILF HHHHHCCCCEEEEEEECCCHHHHHHHHHCCCCCCCEEECCCCCCCCEECCCCHHHHHHHH ELDRIDYLFLPIGGGGLCAGVGTYFKIHSPQTKIIGAEPMGAPSMKEAFHSGKPIVLEKI HHHCCCEEEEEECCCCHHHCCCCEEEEECCCCEEEECCCCCCCHHHHHHHCCCCHHHHHH DKFVDGAAVKKVGEFTFPICQSVLHDLCLVPEGKVCTTILNLYNLDAIVSEPAGALSIAA HHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEE LDDYKESIRGKTVVCILSGGNNDIDRMQEIKERSLLYEGLKQYFIVRFAQKPGALKQFVN HHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH EILGPNDDIVRFEFIQKNNKESGPALIGIELKSKDDFQNLLIRMQEYRLNFTLINQDENL HHCCCCCCEEEEEEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHHHEEEEEEECCCCHH FEYLI HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11058132 [H]