| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220981
Identifier: 183220981
GI number: 183220981
Start: 1670952
End: 1672550
Strand: Direct
Name: 183220981
Synonym: LEPBI_I1594
Alternate gene names: NA
Gene position: 1670952-1672550 (Clockwise)
Preceding gene: 183220977
Following gene: 183220986
Centisome position: 46.42
GC content: 38.65
Gene sequence:
>1599_bases GTGGGCCACTATTCTCGTTACCTATGTCTTCTTTTGGTATTCCTTTGCCTGATTCCGTCTGTCCAGGGACAGGTTTGGGT TCCCACTGGCACTGAATCGAGAAGGGCTTCTGCATTACAGTTTGATGCAGGTGGTTCCAGTTTTCAGAAAGATTATTATG GGTATGTATCTCCCAATTTTACATTCAATCATGGTAGCCAATTTGGTTATTCTTTTTCACTTCCGATAAACGTCCTTGCC GTTGACAAGGAACCCCTTCAATTAGAAAGCAAAGCGGGTAAAATCCGTGAAATGGATTATAATAGTCGAAATGACTATTC CCGCGTATTAAATTATATATCATACGGAACCTATAACCAACAAGTTCCAGGAAAAGTGACGTATTCGGCTTACACAGGTA AGATGGTCGATGGATATATTGGTCACGGAACCATTGTTAATAAATACCAAAGTTCTTCTAGGTTTGATTCCTATAATCCT GGAGTTATGGCTGATTTGAATACCGATTATGGTGGAGTTCAATACTTTGCCAATTCTGTAGTAAACTTTGAAGTGAACGC GGCAAGGGTTTATATCAAACCTTTGGCCATTGGAAGATCACTTTATTCTTTATTTGATAAGTCCTCTGACTTAGTGTATT TAATGAACCTAAGAGGGAATGTACTTGATGAATCGGGGCGACTCAGTGTTGAGGAAGAAGCAGGTTCCGAAGAAATCCAA AAGAAAAAAGCCGAAGAACTTCGTAAAAAAGAAATTCGACCGATGAGCAAAGACTCAAGGATGGAACTTGTCGACAACGA TCCATGGTACAATCGTTTAACGATTGGTTATACCCAAGCTTGGGATAGACAAGCTCCCGTACAAATGGCATACAATACCA ATGGATCGCCGGTTACAGAAAAAAAATTAGACAATCCGAAAACTACAGAAGTGACTAGAGCATCGATTGAAGGTATGGAC ATAGAATACCGACTTCTCAACCTTCCATTTGTGGAATTTACACCCTACGTAGATTTTAATAAAATTAAGGGACTCGACGG CGCACAAGGGGCTCACTACGGAAGTATTTTTCGCTTAGGAACTAAGGATTTAAACATCATACTAAAACCGGAATTTCGTC AGATGACTGCAAATTATGCTCCAATGTATTTTGATAGTTTTTATGAAGTGGAACGGTTTCAAAAATTTCCCATTTCAGCT CCCATACGACCAAAATACGATTACTTAGATAACCAATCCAATGCCAAAGTGACTGGATATTATCATACGATTTATGTAAA TTTTTACCATTTGGGTTTTGAGTTTGCCGTGGAAGATTACGGTCTCAAAGGAAACAAACGAGTATTTGCTGCGGCATATA TTCCTCTTGGATCATCTTTTCTTATGTCATTTTATTATACCAAAAAAGGTTTTGATTCGCAAGGGAAGGCATTCGATATC GATAACAATACGCAAGCAGCAGCCGAAATCTCGAAAGCATTTGGACCTATCGTATTAAGAGTTCAGAATTATCGAAAGTA TTACTTAGATTCCAGTGAAAAGTCTTTCCTCAGTATCGATGAAATTCGATTCCTTGTTTCTGGTGGAATTAGTTTTTAA
Upstream 100 bases:
>100_bases AAATCTCCAATAAAATAGAATAAATATCTGTTTTATTGGATTTGTCCCAAAGAGATTATTTCTTATTTTCTAGGGAAAAC AATACGATAATGAACGTATC
Downstream 100 bases:
>100_bases AAAGTAGATATAAAAGCGAAGAGAAAGCAAATTCAGTTCGCAGGTTGATCCTGCCAAGTGTATGGAGTAAATATTTTCTC TTTGAAAAAAAATCCAAATC
Product: hypothetical protein
Products: NA
Alternate protein names: Cytoplasmic Membrane Protein ImpL
Number of amino acids: Translated: 532; Mature: 531
Protein sequence:
>532_residues MGHYSRYLCLLLVFLCLIPSVQGQVWVPTGTESRRASALQFDAGGSSFQKDYYGYVSPNFTFNHGSQFGYSFSLPINVLA VDKEPLQLESKAGKIREMDYNSRNDYSRVLNYISYGTYNQQVPGKVTYSAYTGKMVDGYIGHGTIVNKYQSSSRFDSYNP GVMADLNTDYGGVQYFANSVVNFEVNAARVYIKPLAIGRSLYSLFDKSSDLVYLMNLRGNVLDESGRLSVEEEAGSEEIQ KKKAEELRKKEIRPMSKDSRMELVDNDPWYNRLTIGYTQAWDRQAPVQMAYNTNGSPVTEKKLDNPKTTEVTRASIEGMD IEYRLLNLPFVEFTPYVDFNKIKGLDGAQGAHYGSIFRLGTKDLNIILKPEFRQMTANYAPMYFDSFYEVERFQKFPISA PIRPKYDYLDNQSNAKVTGYYHTIYVNFYHLGFEFAVEDYGLKGNKRVFAAAYIPLGSSFLMSFYYTKKGFDSQGKAFDI DNNTQAAAEISKAFGPIVLRVQNYRKYYLDSSEKSFLSIDEIRFLVSGGISF
Sequences:
>Translated_532_residues MGHYSRYLCLLLVFLCLIPSVQGQVWVPTGTESRRASALQFDAGGSSFQKDYYGYVSPNFTFNHGSQFGYSFSLPINVLA VDKEPLQLESKAGKIREMDYNSRNDYSRVLNYISYGTYNQQVPGKVTYSAYTGKMVDGYIGHGTIVNKYQSSSRFDSYNP GVMADLNTDYGGVQYFANSVVNFEVNAARVYIKPLAIGRSLYSLFDKSSDLVYLMNLRGNVLDESGRLSVEEEAGSEEIQ KKKAEELRKKEIRPMSKDSRMELVDNDPWYNRLTIGYTQAWDRQAPVQMAYNTNGSPVTEKKLDNPKTTEVTRASIEGMD IEYRLLNLPFVEFTPYVDFNKIKGLDGAQGAHYGSIFRLGTKDLNIILKPEFRQMTANYAPMYFDSFYEVERFQKFPISA PIRPKYDYLDNQSNAKVTGYYHTIYVNFYHLGFEFAVEDYGLKGNKRVFAAAYIPLGSSFLMSFYYTKKGFDSQGKAFDI DNNTQAAAEISKAFGPIVLRVQNYRKYYLDSSEKSFLSIDEIRFLVSGGISF >Mature_531_residues GHYSRYLCLLLVFLCLIPSVQGQVWVPTGTESRRASALQFDAGGSSFQKDYYGYVSPNFTFNHGSQFGYSFSLPINVLAV DKEPLQLESKAGKIREMDYNSRNDYSRVLNYISYGTYNQQVPGKVTYSAYTGKMVDGYIGHGTIVNKYQSSSRFDSYNPG VMADLNTDYGGVQYFANSVVNFEVNAARVYIKPLAIGRSLYSLFDKSSDLVYLMNLRGNVLDESGRLSVEEEAGSEEIQK KKAEELRKKEIRPMSKDSRMELVDNDPWYNRLTIGYTQAWDRQAPVQMAYNTNGSPVTEKKLDNPKTTEVTRASIEGMDI EYRLLNLPFVEFTPYVDFNKIKGLDGAQGAHYGSIFRLGTKDLNIILKPEFRQMTANYAPMYFDSFYEVERFQKFPISAP IRPKYDYLDNQSNAKVTGYYHTIYVNFYHLGFEFAVEDYGLKGNKRVFAAAYIPLGSSFLMSFYYTKKGFDSQGKAFDID NNTQAAAEISKAFGPIVLRVQNYRKYYLDSSEKSFLSIDEIRFLVSGGISF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60581; Mature: 60450
Theoretical pI: Translated: 8.05; Mature: 8.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGHYSRYLCLLLVFLCLIPSVQGQVWVPTGTESRRASALQFDAGGSSFQKDYYGYVSPNF CCCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCCCEEECCCE TFNHGSQFGYSFSLPINVLAVDKEPLQLESKAGKIREMDYNSRNDYSRVLNYISYGTYNQ EECCCCCCCEEEECCEEEEEECCCCCEECCCCCCEEECCCCCCCCHHHHHHHHHCCCCCC QVPGKVTYSAYTGKMVDGYIGHGTIVNKYQSSSRFDSYNPGVMADLNTDYGGVQYFANSV CCCCEEEEEEECCCEECCCCCCCEEEECCCCCCCCCCCCCCEEEECCCCCCHHHHHHCCE VNFEVNAARVYIKPLAIGRSLYSLFDKSSDLVYLMNLRGNVLDESGRLSVEEEAGSEEIQ EEEEEEEEEEEEEEHHHHHHHHHHHCCCCCEEEEEECCCCEECCCCCEEEHHHCCHHHHH KKKAEELRKKEIRPMSKDSRMELVDNDPWYNRLTIGYTQAWDRQAPVQMAYNTNGSPVTE HHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCH KKLDNPKTTEVTRASIEGMDIEYRLLNLPFVEFTPYVDFNKIKGLDGAQGAHYGSIFRLG HHCCCCCCCCEEEHCCCCCCEEEEEEECCEEEECCCCCHHHHCCCCCCCCCCCCCEEEEC TKDLNIILKPEFRQMTANYAPMYFDSFYEVERFQKFPISAPIRPKYDYLDNQSNAKVTGY CCCEEEEECCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCEEEEE YHTIYVNFYHLGFEFAVEDYGLKGNKRVFAAAYIPLGSSFLMSFYYTKKGFDSQGKAFDI EEEEEEEEEEEEEEEEEECCCCCCCCEEEEEEEECCCHHHHHHHHHHCCCCCCCCCEEEC DNNTQAAAEISKAFGPIVLRVQNYRKYYLDSSEKSFLSIDEIRFLVSGGISF CCCCHHHHHHHHCCCCEEEEEECCHHEECCCCCCCEEEHHHHHHHCCCCCCC >Mature Secondary Structure GHYSRYLCLLLVFLCLIPSVQGQVWVPTGTESRRASALQFDAGGSSFQKDYYGYVSPNF CCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCEEEECCCCCCCCCCCCEEECCCE TFNHGSQFGYSFSLPINVLAVDKEPLQLESKAGKIREMDYNSRNDYSRVLNYISYGTYNQ EECCCCCCCEEEECCEEEEEECCCCCEECCCCCCEEECCCCCCCCHHHHHHHHHCCCCCC QVPGKVTYSAYTGKMVDGYIGHGTIVNKYQSSSRFDSYNPGVMADLNTDYGGVQYFANSV CCCCEEEEEEECCCEECCCCCCCEEEECCCCCCCCCCCCCCEEEECCCCCCHHHHHHCCE VNFEVNAARVYIKPLAIGRSLYSLFDKSSDLVYLMNLRGNVLDESGRLSVEEEAGSEEIQ EEEEEEEEEEEEEEHHHHHHHHHHHCCCCCEEEEEECCCCEECCCCCEEEHHHCCHHHHH KKKAEELRKKEIRPMSKDSRMELVDNDPWYNRLTIGYTQAWDRQAPVQMAYNTNGSPVTE HHHHHHHHHHHCCCCCCCCCEEEECCCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCH KKLDNPKTTEVTRASIEGMDIEYRLLNLPFVEFTPYVDFNKIKGLDGAQGAHYGSIFRLG HHCCCCCCCCEEEHCCCCCCEEEEEEECCEEEECCCCCHHHHCCCCCCCCCCCCCEEEEC TKDLNIILKPEFRQMTANYAPMYFDSFYEVERFQKFPISAPIRPKYDYLDNQSNAKVTGY CCCEEEEECCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCEEEEE YHTIYVNFYHLGFEFAVEDYGLKGNKRVFAAAYIPLGSSFLMSFYYTKKGFDSQGKAFDI EEEEEEEEEEEEEEEEEECCCCCCCCEEEEEEEECCCHHHHHHHHHHCCCCCCCCCEEEC DNNTQAAAEISKAFGPIVLRVQNYRKYYLDSSEKSFLSIDEIRFLVSGGISF CCCCHHHHHHHHCCCCEEEEEECCHHEECCCCCCCEEEHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA