Click here to switch to the map view.

The map label for this gene is flaB [H]

Identifier: 183220976

GI number: 183220976

Start: 1664994

End: 1665842

Strand: Direct

Name: flaB [H]

Synonym: LEPBI_I1589

Alternate gene names: 183220976

Gene position: 1664994-1665842 (Clockwise)

Preceding gene: 183220965

Following gene: 183220977

Centisome position: 46.25

GC content: 44.41

Gene sequence:

>849_bases
ATGATTATCAACCACAACGTAAGTGCGATCTTTGCACACAGAACTTTGAAGTCTAACGACGCGAACCTGAGCAAAGATAT
CGAAAAGTTGTCTTCTGGTATGCGTATTAACAAAGCCGGAGATGACGCATCTGGACTTGCAGTGTCTGAGAAAATGAGAA
CTCAGATTGCTGGTCTTCGACGTGCAGAACAGAATACTGAAGATGGTATGTCCCTCATTCAAACGGCGGAAGGATATCTT
CAAGAAACACACGAAATCGTTCAACGTGTTCGTGTACTCGCGGTGCAAGCTGCGAACGGTATCTACTCGGAAGAAGATAG
ACAACAGATCCAAGTCGAGGTTTCACAGCTAGTGGACGAGATCGATCGTATTGCTTCTCAAGCAGAATTCAATAAAATGA
AACTGCTTACAGGAGCGTTTGCTCGACTCAACCCAACTGCTAGTATGTGGTTCCATATTGGAGCTAACATGCACCAAAGA
GAGCGCGTGTACATTGAAACAATGAACACTGCGGCATTGGGATTAAGAAACCCTACGGTTCTTACTTTCATCTCTCTTTC
GACTGCAGGAAAAGCAAACTCCGTGATCGGACTTTGTGATGATGCCCTAAGAGTGATCTCTAAACAAAGAGCTGACCTTG
GTGCTTATTACAACCGTATGGAGCATGCTGCGAAAGGACTTATGAATGCTTATGAAAACACACAAGCTTCTGAGTCTCGT
ATCCGTGATACTGACATGGCTGAACAAATGACCAGCTTCACGAGATACCAAATCTTAACTCAGGCTGCTACATCAATGCT
TGCGCAAGCAAACATGAAGTCTCAGTCAGTGATGAGATTGCTCCAGTAA

Upstream 100 bases:

>100_bases
TCTTGAAAGGGCCAAGGATGGCCTCTTCGAAAATTCATCAATTTCTTGGGTTTTGGCGAAAGCCAGAGCGGTGAGAGAAC
GGATTCAAGGAGGAACCCGG

Downstream 100 bases:

>100_bases
TAGGATAAGAGAAACTAAAGGCCAGGGCAGGGTGGTTGGGGCCCTTCCTTTGGTTTCTCGATTTTTCTTTCTTAGACCTT
AATCCGATCCACAAATACTT

Product: flagellar filament core protein FlaB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MIINHNVSAIFAHRTLKSNDANLSKDIEKLSSGMRINKAGDDASGLAVSEKMRTQIAGLRRAEQNTEDGMSLIQTAEGYL
QETHEIVQRVRVLAVQAANGIYSEEDRQQIQVEVSQLVDEIDRIASQAEFNKMKLLTGAFARLNPTASMWFHIGANMHQR
ERVYIETMNTAALGLRNPTVLTFISLSTAGKANSVIGLCDDALRVISKQRADLGAYYNRMEHAAKGLMNAYENTQASESR
IRDTDMAEQMTSFTRYQILTQAATSMLAQANMKSQSVMRLLQ

Sequences:

>Translated_282_residues
MIINHNVSAIFAHRTLKSNDANLSKDIEKLSSGMRINKAGDDASGLAVSEKMRTQIAGLRRAEQNTEDGMSLIQTAEGYL
QETHEIVQRVRVLAVQAANGIYSEEDRQQIQVEVSQLVDEIDRIASQAEFNKMKLLTGAFARLNPTASMWFHIGANMHQR
ERVYIETMNTAALGLRNPTVLTFISLSTAGKANSVIGLCDDALRVISKQRADLGAYYNRMEHAAKGLMNAYENTQASESR
IRDTDMAEQMTSFTRYQILTQAATSMLAQANMKSQSVMRLLQ
>Mature_282_residues
MIINHNVSAIFAHRTLKSNDANLSKDIEKLSSGMRINKAGDDASGLAVSEKMRTQIAGLRRAEQNTEDGMSLIQTAEGYL
QETHEIVQRVRVLAVQAANGIYSEEDRQQIQVEVSQLVDEIDRIASQAEFNKMKLLTGAFARLNPTASMWFHIGANMHQR
ERVYIETMNTAALGLRNPTVLTFISLSTAGKANSVIGLCDDALRVISKQRADLGAYYNRMEHAAKGLMNAYENTQASESR
IRDTDMAEQMTSFTRYQILTQAATSMLAQANMKSQSVMRLLQ

Specific function: Component of the core of the flagella (Probable) [H]

COG id: COG1344

COG function: function code N; Flagellin and related hook-associated proteins

Gene ontology:

Cell location: Periplasmic flagellum. Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial flagellin family [H]

Homologues:

Organism=Escherichia coli, GI1788232, Length=195, Percent_Identity=37.4358974358974, Blast_Score=125, Evalue=2e-30,

Paralogues:

None

Copy number: 200,000-400,000 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001492
- InterPro:   IPR001029 [H]

Pfam domain/function: PF00700 Flagellin_C; PF00669 Flagellin_N [H]

EC number: NA

Molecular weight: Translated: 31379; Mature: 31379

Theoretical pI: Translated: 7.76; Mature: 7.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.3 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIINHNVSAIFAHRTLKSNDANLSKDIEKLSSGMRINKAGDDASGLAVSEKMRTQIAGLR
CEECCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHH
RAEQNTEDGMSLIQTAEGYLQETHEIVQRVRVLAVQAANGIYSEEDRQQIQVEVSQLVDE
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
IDRIASQAEFNKMKLLTGAFARLNPTASMWFHIGANMHQRERVYIETMNTAALGLRNPTV
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEECCCCCCCCEEEEEECCHHHHCCCCCCE
LTFISLSTAGKANSVIGLCDDALRVISKQRADLGAYYNRMEHAAKGLMNAYENTQASESR
EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
IRDTDMAEQMTSFTRYQILTQAATSMLAQANMKSQSVMRLLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC
>Mature Secondary Structure
MIINHNVSAIFAHRTLKSNDANLSKDIEKLSSGMRINKAGDDASGLAVSEKMRTQIAGLR
CEECCCHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHH
RAEQNTEDGMSLIQTAEGYLQETHEIVQRVRVLAVQAANGIYSEEDRQQIQVEVSQLVDE
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
IDRIASQAEFNKMKLLTGAFARLNPTASMWFHIGANMHQRERVYIETMNTAALGLRNPTV
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHEEECCCCCCCCEEEEEECCHHHHCCCCCCE
LTFISLSTAGKANSVIGLCDDALRVISKQRADLGAYYNRMEHAAKGLMNAYENTQASESR
EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
IRDTDMAEQMTSFTRYQILTQAATSMLAQANMKSQSVMRLLQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA