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The map label for this gene is cheD4 [H]

Identifier: 183220967

GI number: 183220967

Start: 1654203

End: 1654691

Strand: Reverse

Name: cheD4 [H]

Synonym: LEPBI_I1580

Alternate gene names: 183220967

Gene position: 1654691-1654203 (Counterclockwise)

Preceding gene: 183220968

Following gene: 183220966

Centisome position: 45.97

GC content: 36.2

Gene sequence:

>489_bases
ATGGAAACACCGATTGAAGTCATCGATCGATTTTTAAATCCAGGGGAAATTTTCTTTGGAGATGGTCATTACCGAGTACG
AACCCTTCTAGGATCATGTGTATCAATTGTCTTATGGCACCCGATCCTTCAGTTAGGTGGAATGTGTCATTTTTTACTCC
CCTATCCCTCTGATATCAAACTGGAAAAAACGCATAAATATGGAATCGATGCCTTCCAATATTTTTTAAATGAAATCAAA
AAAAAACGCACAAAACCCACGGAATACTCTGCCAAAATTTTTGGTGGATCGAATATGTTTTTAAATGAAGAACGAGAAAT
TTTAAGAAATGATGCCTCAAGCCTCATTGGAACGAAGAACGCCGAATTTGCAAAAAAAATCCTTCAGGAAAATCAAATCA
AAATTATTTCTGAAGACCTTGGTGGAAACCAATCGAGAAAAATATATTTTTCTGTTTGGGACGGCGAAGTGTGGGTCGAA
AAAAAATAA

Upstream 100 bases:

>100_bases
AAAGTTAGAAAACCAATTTGTGATCATTTTAAAAATGAATCAAATCTTGGATTTATCCGAAATCCAAACCATCCAAGAAA
CATCGTCTCAAGTGAATTGA

Downstream 100 bases:

>100_bases
GCCATGAATCGAATTAAGGTTTTTGTGATCGATGACTCTGCTGTGGTCCGGCAAGTGCTTACTGAAATTTTTAAACAAGA
TTCACATTTTTTATTCTTAG

Product: chemotaxis protein cheD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
METPIEVIDRFLNPGEIFFGDGHYRVRTLLGSCVSIVLWHPILQLGGMCHFLLPYPSDIKLEKTHKYGIDAFQYFLNEIK
KKRTKPTEYSAKIFGGSNMFLNEEREILRNDASSLIGTKNAEFAKKILQENQIKIISEDLGGNQSRKIYFSVWDGEVWVE
KK

Sequences:

>Translated_162_residues
METPIEVIDRFLNPGEIFFGDGHYRVRTLLGSCVSIVLWHPILQLGGMCHFLLPYPSDIKLEKTHKYGIDAFQYFLNEIK
KKRTKPTEYSAKIFGGSNMFLNEEREILRNDASSLIGTKNAEFAKKILQENQIKIISEDLGGNQSRKIYFSVWDGEVWVE
KK
>Mature_162_residues
METPIEVIDRFLNPGEIFFGDGHYRVRTLLGSCVSIVLWHPILQLGGMCHFLLPYPSDIKLEKTHKYGIDAFQYFLNEIK
KKRTKPTEYSAKIFGGSNMFLNEEREILRNDASSLIGTKNAEFAKKILQENQIKIISEDLGGNQSRKIYFSVWDGEVWVE
KK

Specific function: Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis [H]

COG id: COG1871

COG function: function code NT; Chemotaxis protein; stimulates methylation of MCP proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CheD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005659 [H]

Pfam domain/function: PF03975 CheD [H]

EC number: =3.5.1.44 [H]

Molecular weight: Translated: 18718; Mature: 18718

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METPIEVIDRFLNPGEIFFGDGHYRVRTLLGSCVSIVLWHPILQLGGMCHFLLPYPSDIK
CCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCE
LEKTHKYGIDAFQYFLNEIKKKRTKPTEYSAKIFGGSNMFLNEEREILRNDASSLIGTKN
EECCHHCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEECHHHHHHHHHHHHHHCCCC
AEFAKKILQENQIKIISEDLGGNQSRKIYFSVWDGEVWVEKK
HHHHHHHHHCCCEEEEECCCCCCCCCEEEEEEECCEEEEECC
>Mature Secondary Structure
METPIEVIDRFLNPGEIFFGDGHYRVRTLLGSCVSIVLWHPILQLGGMCHFLLPYPSDIK
CCCHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCE
LEKTHKYGIDAFQYFLNEIKKKRTKPTEYSAKIFGGSNMFLNEEREILRNDASSLIGTKN
EECCHHCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCEECHHHHHHHHHHHHHHCCCC
AEFAKKILQENQIKIISEDLGGNQSRKIYFSVWDGEVWVEKK
HHHHHHHHHCCCEEEEECCCCCCCCCEEEEEEECCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA