| Definition | Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)' chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_010602 |
| Length | 3,599,677 |
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The map label for this gene is 183220878
Identifier: 183220878
GI number: 183220878
Start: 1553465
End: 1553896
Strand: Direct
Name: 183220878
Synonym: LEPBI_I1491
Alternate gene names: NA
Gene position: 1553465-1553896 (Clockwise)
Preceding gene: 183220875
Following gene: 183220879
Centisome position: 43.16
GC content: 35.88
Gene sequence:
>432_bases GTGAGCGCCCAATCTCCCAAAGGCAAAGAGTCTGAATCGGCGTCGAAATCGGCCACCTTACATCACAAAGTTGAAAAGAA TCTAATCAAAAAATTATTAGTTGAATTAGGTTACCAAATCATCAGTGATGAAGATAAACTACTCATCGTATCATATCAAG ATTTTAGAGTAGGCCTTGTATCTGGGAATGATACTTCCATTCAATTCTATTCCTCCTTTAACACAGACAAAAAAAATAAA ATGGAATTAGCGAACAAGTGGAATCAGAAGATGAGGTATTCCAGAAGTTATATGGATGCGGAAGGGAGACTTGTATTGGA AAGTGACTTTGATTATTCTGGTGGCGTGAGTGAAGAAGCCATCAAAGAATTTTTGCAAAAATTCCAAATTTTAAATTCGC AGTTTAGTACACTTTTGATTTTAGCGGAATAA
Upstream 100 bases:
>100_bases ATTCTAGCGAATGTTTGCATTTTAAATAGCAATGAGGTTGATTGTGAGATCATTTATTTCTTCGATTTTAATTTTTGTCG TATTATCCACTGTTTTTGTT
Downstream 100 bases:
>100_bases TCAAAAGGTTTTCAATTTTATTTTCCCATTCAAATCCCTTGTTTTTCTTTTTTTCCGCAAGATAGAAAATGGAGGGAATA AAAATGAATGATCATTCATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MSAQSPKGKESESASKSATLHHKVEKNLIKKLLVELGYQIISDEDKLLIVSYQDFRVGLVSGNDTSIQFYSSFNTDKKNK MELANKWNQKMRYSRSYMDAEGRLVLESDFDYSGGVSEEAIKEFLQKFQILNSQFSTLLILAE
Sequences:
>Translated_143_residues MSAQSPKGKESESASKSATLHHKVEKNLIKKLLVELGYQIISDEDKLLIVSYQDFRVGLVSGNDTSIQFYSSFNTDKKNK MELANKWNQKMRYSRSYMDAEGRLVLESDFDYSGGVSEEAIKEFLQKFQILNSQFSTLLILAE >Mature_142_residues SAQSPKGKESESASKSATLHHKVEKNLIKKLLVELGYQIISDEDKLLIVSYQDFRVGLVSGNDTSIQFYSSFNTDKKNKM ELANKWNQKMRYSRSYMDAEGRLVLESDFDYSGGVSEEAIKEFLQKFQILNSQFSTLLILAE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16317; Mature: 16185
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAQSPKGKESESASKSATLHHKVEKNLIKKLLVELGYQIISDEDKLLIVSYQDFRVGLV CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCEEEEEECCEEEEEE SGNDTSIQFYSSFNTDKKNKMELANKWNQKMRYSRSYMDAEGRLVLESDFDYSGGVSEEA ECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHH IKEFLQKFQILNSQFSTLLILAE HHHHHHHHHHHHCCCCEEEEEEC >Mature Secondary Structure SAQSPKGKESESASKSATLHHKVEKNLIKKLLVELGYQIISDEDKLLIVSYQDFRVGLV CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCEEEEEECCEEEEEE SGNDTSIQFYSSFNTDKKNKMELANKWNQKMRYSRSYMDAEGRLVLESDFDYSGGVSEEA ECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHH IKEFLQKFQILNSQFSTLLILAE HHHHHHHHHHHHCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA